Ooceraea biroi (clonal raider ant): 105280798
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Entry
105280798 CDS
T05778
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105280798
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
obo01007
]
105280798
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obo03016
]
105280798
Enzymes [BR:
obo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
105280798
Amino acid related enzymes [BR:
obo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
105280798
Transfer RNA biogenesis [BR:
obo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105280798
Prokaryotic type
105280798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
Arc1p_N_like
tRNA-synt_2b
tRNA-synt_2
MBT
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
105280798
NCBI-ProteinID:
XP_011339913
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Position
4:3439595..3443425
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AA seq
614 aa
AA seq
DB search
MALAMADETPRETLLIQVKEQGELVRRLKAAKAENTQEHREQPDINVELESLNNDFADVS
YVCGWCPTSKDTKLFDTLRVILNDNELARWPHLNRWYINIKSFTRGERLGFPAAEAPLTP
LAKMIERLKSIHCSSKNMLDKKIADEVAKLLDLKAKLGEENGCPHKLILKTPKGTRDYNP
EQMALRLGVLEKIIAVFKRHGAETIDTPVFELKDVLTGKYGEDSKLIYDLKDQGGELLAL
RYDLTVPFARYLAMNKISSIKRYHIAKVYRRDNPATTKGRYREFYQCDFDIAGQYDPMLP
DAECIRVVSEALQALDLGPYMIKLNHRSLLDGVFAACGVPQSKFRSICSAVDKLDKSPWE
EVKKEMTEEKGLDEHTADLVGNYVSQSGGVELIAELRKDKELMKQPAAVQGLNSMELLLK
YCDIYKILDKIEFDLSLARGLDYYTGVIYEAILCGDDVGVGSVAGGGRYDNLVGMFDSKN
KTVPCVGVSLGVERIFSVMEAKLANKGMKTRTTQLEVFVASAQKNMQEERMKILVDLWEA
GVKAEHSYKKNAKILQQLQHCEENGIPLAIIIGEGELAKGEVTLRVVSTREETRVSRNNL
VEEIRKRLGALSGA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcactagcgatggctgacgaaacaccgagggagacgttactgatccaagtgaaagaa
cagggcgagctagtgcgacgattgaaagctgcgaaggccgaaaacacgcaggaacacaga
gaacagcctgacatcaacgttgagttagagagcttgaacaatgactttgcggatgtcagt
tatgtgtgtggttggtgcccaacgtccaaagataccaaactgttcgacacgttgcgtgtc
atccttaacgataacgagcttgcaaggtggccgcatctgaacagatggtatattaatatt
aaaagcttcactcggggagaacgtctagggtttcccgctgcggaagcaccactaactccc
ctggcaaaaatgatcgagcggctaaagagtattcactgtagtagcaaaaatatgctagat
aaaaagatagcggatgaagtcgcgaaactgctggatctgaaggcgaagttgggcgaggaa
aatggttgtccccataagctcatcctcaaaacgcctaaaggcacgagggactataatccg
gagcaaatggcactgcgattgggagtactagagaaaataatcgcggtatttaagcgccac
ggtgcggagaccatagacacgcctgtattcgagctgaaagatgtcttgacgggcaaatac
ggtgaggattccaagctcatctacgacttgaaggaccaaggcggcgagctcctcgccctt
agatacgatttgacagttcctttcgcgaggtatctggccatgaacaaaatatcttccatc
aagaggtatcacattgcgaaggtctatcgaagagataatccagctaccacgaaagggaga
tacagagaattttatcagtgtgatttcgacattgctggccagtacgatccgatgctaccg
gatgcggagtgcattcgagtcgtgtccgaggcgttgcaggctctggatctgggaccgtac
atgatcaaattgaatcacaggtccctgctggacggcgtgttcgccgcgtgtggcgtgccg
caaagcaagttccgcagtatctgctccgccgtggataaattggacaaaagcccgtgggag
gaggtgaagaaagagatgacggaggagaaggggctcgacgagcataccgccgacctcgtg
ggcaactacgtctcccagtctggcggagtcgaactgatagccgagctaagaaaagataaa
gaactgatgaaacagcctgccgccgtacaaggattgaattctatggaactgctactgaaa
tattgtgatatttacaagattctcgacaaaatcgagttcgacttgagcctcgcgagggga
ctcgattactacacaggcgtcatttacgaagctatattgtgcggagatgacgtcggcgtt
ggtagcgtggccggtggtggtcgttacgacaatctagtgggaatgttcgacagtaagaac
aaaactgtaccctgcgtgggtgtgtcgctgggcgtcgagcggatattcagcgtcatggag
gcgaaactggcgaacaaaggtatgaagacgcgcactacccagctcgaggtgttcgtggcg
agcgcgcagaagaatatgcaagaggagagaatgaagatactggtggatctgtgggaagcc
ggagtgaaggcggagcactcgtacaagaagaacgcaaagattctgcagcagctgcagcac
tgcgaggagaacggcattccgctggcgataatcattggagagggtgaactggctaagggt
gaagttacgctgcgagtcgtctcgacgcgggaggagactcgcgtgtcgcgcaataatctc
gtcgaggaaatacggaaacgactgggagcgttatcgggcgcgtga
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