Ooceraea biroi (clonal raider ant): 105281070
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Entry
105281070 CDS
T05778
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
obo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105281070
03015 mRNA surveillance pathway
105281070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105281070
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105281070
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105281070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
105281070
NCBI-ProteinID:
XP_011340337
LinkDB
All DBs
Position
5:complement(11980409..11983908)
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AA seq
482 aa
AA seq
DB search
MASTKVDWGQYADEQEKLTSKVTNLNLDNKPNSATISVPLVKDGESKSDDDTSEEQISAA
EKSLLQKIIRKGLVMTTKDIEVQRKDPTSPLYSVKSFDALHLKPALLKGVYAMGFNAPSR
IQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDPTKDYPQVLCLSPTYELAIQ
TGEVAAKMSRFCPEIKIKYAVRGEEISRGSKITEHIIIGTPGKVLDWGQKFKFFDLAKIS
VFVLDEADVMIATQGHQDQCIRIHKLLPRTCQMMFFSATYEPEVMNFAEIIVSNPLIIRL
LREEESLDNIKQYYIRCRDVNEKYTAITNIYGVITIGQAIIFCHTKKTASWLAEKMTKDG
HAVGILSGDLTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPMDQKRQ
ADCETYLHRIGRTGRFGKSGIAINLIDSQHAMQLCKDIEKHFGKKIHYLDAEDADEIEKI
GA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactaaggtcgactggggacaatatgccgatgaacaggagaagttgacgtca
aaggtgacgaatttgaatttggataataaaccaaattcagcgaccatctctgttccgctt
gtgaaagatggagagtccaagagcgatgatgacacatcggaggagcagatctcagcagcg
gagaagtcgctcctgcaaaagattataagaaaaggattagttatgacaacaaaggatata
gaagttcagagaaaggatccaacttcaccgttatacagtgtcaaatcgtttgatgcgctt
cacctcaaacctgcgttgctgaaaggagtttacgctatgggttttaatgctccttcaaga
attcaagaaactgctttacctaccttacttgccgatccaccacaaaatatgattgcacaa
tcccaatcgggtactggtaaaacggctgcgtttgtactcgccatgttgagtcgagtggat
cccacaaaggattatccacaggtgctgtgtctatcaccaacttacgaactagcgatccag
actggcgaagtggcagcaaagatgtcgcgcttttgtccagagataaaaataaaatacgcc
gtgaggggagaagaaataagccgaggatcgaagattaccgaacacatcatcataggaact
ccaggcaaagtactggattggggacaaaagttcaaattcttcgatctagccaagatatcg
gtattcgtgctagacgaggctgacgttatgattgctactcaaggccatcaggatcagtgt
attcgtattcacaaattacttccacgaacatgtcaaatgatgttcttctctgcaacgtac
gagccagaagtaatgaactttgcggaaattatagttagtaatccgctaataatacgacta
ttgagggaagaggaaagtctagataatatcaaacagtactacatcagatgcagagatgtg
aacgaaaagtacacagccatcacgaacatctacggcgttattactatcggacaagcaatt
atcttttgtcatacgaaaaaaacggccagttggttagcggaaaaaatgacgaaagatggt
cacgccgtggggatactttctggcgacttgacagtggaacagaggatttccgtgctggat
agatttagggcaggacttgaaaaagttctcattactacgaatgttttagctagaggtatt
gacgtagagcaggtgacaatagtggtgaatttcgacctgccaatggatcagaaacgacaa
gctgactgtgaaacgtatttacatagaattgggagaacgggacggttcggcaaatccgga
atcgcaattaatttaattgactcgcaacacgcgatgcagctgtgcaaggacatagaaaaa
cactttggcaaaaaaatacattacctcgatgcagaggatgcggacgagatcgaaaaaatc
ggggcttag
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