Ooceraea biroi (clonal raider ant): 105281080
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Entry
105281080 CDS
T05778
Symbol
Wdr33
Name
(RefSeq) WD repeat domain 33
KO
K15542
polyadenylation factor subunit 2
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105281080 (Wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105281080 (Wdr33)
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105281080 (Wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ASA1
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_EIPR1
CFAP251_N
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_WDR11_2nd
Beta-prop_WDR41
PAC11
WD_LRWD1
Ge1_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
105281080
NCBI-ProteinID:
XP_011340350
LinkDB
All DBs
Position
5:complement(11738075..11746888)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSANAQFANQSPAVSLPNMSVPPPGTPNLSAPPPNLTTINTSGSYPHRYANHREGNRGFF
KPFRPYHAPKVVAGGQDTLQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRR
ALQPDVIYYPDLLPPPSYIDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKGLVI
SGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDIRNL
SQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWT
LAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGSAGIDDHEIADEAAVIP
GMGPEDRINADGEAEDKSGGIPGLDLDHAVDEGKKFANKKVPYSKPIPRNFQAQWNEMEA
EDIEQVEALNAFVNQLIETTPGAVPLNEVTPNAIILYGKMIPVEAGSKLAEAISKGTDAI
NKLVFSGEIEELRDVVGPPDNTDEAEEYLQDDGEIDYSKVPDIDLPPPLPSSKFAQNPEL
LKTLNRGGKRKFDQLIGWSDGGASDRTSKIHQPVFGGVMTEDSQSSDTDLRFGLGKPNVG
ESNSFHGDEDHRRGASHDPMRSSNRDDEDLRFNISGPGRPGSHEYDPRSNNFADKDFRIS
GFSLLKKLDNDMYDDRERDGTSSGRWDDEKDDGPRGKSDGAFAGNSFDKRDSSMAMVPGM
GNSMHGHMAGMPHLSNHHNMQNINPNMPPPIPSLVPHPNMQQHPGMQGKPHPGMPGMDGS
MPSHLMAHHPNMHPGFGPNGPPPGGFGPNFRPPPNGNFGPNHFRPSPMPPFGPNQGPPPF
GNNFQGAPNFRGPNAGPMSFERPGFGPNFRGQNSQGQLNSFNSNFGNFGKNGPNRVMNRG
SGDRSGYNNRSRGRDNDQSRSGRGRDNY
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaatgctcaatttgcaaatcagtcaccagcggtgagtttaccaaatatgtct
gtgccgccgcctggaactccgaacttgtcggcaccaccgccaaatcttaccaccataaac
acatcgggaagctatccacatcgatatgctaatcatagagagggcaatcgtggtttcttc
aagccatttcgaccttatcacgccccgaaagtcgtcgctggagggcaggatactttgcaa
gatgaattcgatgggaagaggctcagaaaatctgttatgcgaaagacggttgattataat
tccgccatcatcaagagtttagagaatcgagtatggcaacgagactacagggatcgtcgc
gcgcttcaaccagatgtaatatattatcccgacttacttccgccgccaagttacattgat
aatccgataaacgcggttaccacgagattcgtaaaaacggccaccaataaaatgcgttgt
ccgattttttgtatggcttggactccagaaggaagacgtctcgttaccggtgcctcgagt
ggcgagttcaccttatggaatggcctcactttcaattttgagactattctacaggcacac
gacagcccagtaaggacaatggtttggtcgcacaacgagagctggatggtaacaggggac
catgcaggctacgtgaaatattggcagagcaatatgaacaacgtcaagatgtttcaagcg
cacaaagaagcgattagaggactcagtttcagtccaacggatcacaaattggcgacctgc
agtgatgacggaactgtcagaatttgggactttcttcgctgtcatgaagaacgaattctc
aggggtcacggtgcagatgtcaaatgcgtgcattggcatccgcaaaagggtctagtcatt
tctggcagtaaagacaatcagcaaccagtgaaactgtgggatccaaaaactggccagtct
ttagcgacactccacgcacacaagtcgactgtgatggatgtcaaatggaacgaaaacggt
aactggttggtgaccgcgtcaagagatcatctattgaaattatttgatatcaggaatctg
agccaagaagttcagactttccgcggccataaaaaagaagcgtccagcgttgcttggcat
ccaagtcatgagggtctcttttgtagcggtggaagcgacggtgctatactcttctggcat
gtgggagcggacaaggaagtaggagcaatagaacaggctcatgatagcatagtctggaca
ttggcttggcatcctttgggacatatcttatgttctggtagcaacgatcacacatctaag
ttttggacacgtaacaggccgggagatcttatgagagataaatacaatctcaatacattg
ccagcgggctcggccggaattgacgatcacgaaatcgctgatgaagcagcagtaataccc
ggtatgggcccggaggatagaatcaatgccgatggtgaggccgaagataagagcggagga
atcccgggtctggacttggatcacgcggtggatgagggcaagaaatttgccaataagaaa
gtaccttatagcaaacctataccacggaacttccaagctcaatggaacgaaatggaggcc
gaggatatcgagcaggttgaagcactcaatgcatttgtcaatcaattgattgaaactacg
cctggtgccgtgccattgaacgaagttacgcctaatgccattatattgtacgggaaaatg
attcctgtagaagcgggctccaagctagcagaagcgatcagtaaaggaaccgacgctata
aacaaattagtattctcgggtgagatagaagagctacgagacgtggttggtccgccggac
aatacagacgaagctgaggagtatctgcaggacgatggtgagatcgattattcgaaagta
cccgacatcgatctcccaccgcctttgcctagttcaaagttcgcacaaaatcctgagcta
ttgaagacattaaatcgcggtggcaagcggaagtttgatcaactaattggctggagcgat
ggcggtgctagcgatcgcacgtccaagattcatcagccggtcttcggtggcgtgatgacg
gaggactcgcagtccagcgacactgatctgaggttcggcctcggtaagccaaatgttggc
gagagtaattccttccacggcgacgaggatcacaggcgaggtgcctctcacgatcccatg
aggagcagcaatcgcgacgacgaagatctgaggttcaacatatccggtcccggtaggccc
ggttcgcacgagtatgatccgcgcagcaacaatttcgctgataaggatttccgcatcagc
ggcttctcgctgttgaaaaagctggacaacgatatgtacgatgaccgagagcgcgatggt
acgagttctggccgctgggatgatgagaaggacgacggtcctcgcggcaaatcggacggc
gcgttcgctggcaacagcttcgacaagcgtgacagtagcatggcgatggttcccggcatg
ggtaacagtatgcacggtcacatggctggcatgcctcatctgtcgaatcatcacaacatg
caaaatatcaatcctaacatgccaccgccgataccgagtctcgtgccgcatcctaatatg
caacagcatcctggtatgcagggtaaacctcatcctggcatgcctggcatggatggctca
atgccgtcacatttgatggcgcaccatccaaacatgcatccaggcttcggtcccaacgga
ccaccgcctggcggtttcgggcccaatttccgaccgccgccaaatggcaattttggaccg
aaccactttaggccgagcccgatgccgccgttcggcccgaatcaaggtccgccgcctttc
ggcaataatttccaaggagcgcccaatttccgcggaccgaacgccggtccgatgagcttc
gaacggccaggctttgggcctaatttccgcgggcagaactcgcagggtcaattaaacagc
tttaactccaatttcggcaatttcggcaagaacggaccgaatcgcgttatgaaccgaggc
agtggtgacagaagtggttacaataatcgcagtagaggacgcgacaacgatcagtcgaga
agtgggaggggaagagacaattattaa
DBGET
integrated database retrieval system