KEGG   Ooceraea biroi (clonal raider ant): 105281080
Entry
105281080         CDS       T05778                                 
Symbol
Wdr33
Name
(RefSeq) WD repeat domain 33
  KO
K15542  polyadenylation factor subunit 2
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105281080 (Wdr33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105281080 (Wdr33)
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     105281080 (Wdr33)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML WDR55 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_IFT140_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd ASA1 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st DSE1_N Beta-prop_EIPR1 CFAP251_N WD40_MABP1-WDR62_1st WD40_RFWD3 eIF2A WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SCAP PEP5_VPS11_N Beta-prop_WDR11_2nd Beta-prop_WDR41 PAC11 WD_LRWD1 Ge1_WD40 WDR54
Other DBs
NCBI-GeneID: 105281080
NCBI-ProteinID: XP_011340350
LinkDB
Position
5:complement(11738075..11746888)
AA seq 1048 aa
MSANAQFANQSPAVSLPNMSVPPPGTPNLSAPPPNLTTINTSGSYPHRYANHREGNRGFF
KPFRPYHAPKVVAGGQDTLQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRR
ALQPDVIYYPDLLPPPSYIDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKGLVI
SGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDIRNL
SQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWT
LAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGSAGIDDHEIADEAAVIP
GMGPEDRINADGEAEDKSGGIPGLDLDHAVDEGKKFANKKVPYSKPIPRNFQAQWNEMEA
EDIEQVEALNAFVNQLIETTPGAVPLNEVTPNAIILYGKMIPVEAGSKLAEAISKGTDAI
NKLVFSGEIEELRDVVGPPDNTDEAEEYLQDDGEIDYSKVPDIDLPPPLPSSKFAQNPEL
LKTLNRGGKRKFDQLIGWSDGGASDRTSKIHQPVFGGVMTEDSQSSDTDLRFGLGKPNVG
ESNSFHGDEDHRRGASHDPMRSSNRDDEDLRFNISGPGRPGSHEYDPRSNNFADKDFRIS
GFSLLKKLDNDMYDDRERDGTSSGRWDDEKDDGPRGKSDGAFAGNSFDKRDSSMAMVPGM
GNSMHGHMAGMPHLSNHHNMQNINPNMPPPIPSLVPHPNMQQHPGMQGKPHPGMPGMDGS
MPSHLMAHHPNMHPGFGPNGPPPGGFGPNFRPPPNGNFGPNHFRPSPMPPFGPNQGPPPF
GNNFQGAPNFRGPNAGPMSFERPGFGPNFRGQNSQGQLNSFNSNFGNFGKNGPNRVMNRG
SGDRSGYNNRSRGRDNDQSRSGRGRDNY
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgtctgcgaatgctcaatttgcaaatcagtcaccagcggtgagtttaccaaatatgtct
gtgccgccgcctggaactccgaacttgtcggcaccaccgccaaatcttaccaccataaac
acatcgggaagctatccacatcgatatgctaatcatagagagggcaatcgtggtttcttc
aagccatttcgaccttatcacgccccgaaagtcgtcgctggagggcaggatactttgcaa
gatgaattcgatgggaagaggctcagaaaatctgttatgcgaaagacggttgattataat
tccgccatcatcaagagtttagagaatcgagtatggcaacgagactacagggatcgtcgc
gcgcttcaaccagatgtaatatattatcccgacttacttccgccgccaagttacattgat
aatccgataaacgcggttaccacgagattcgtaaaaacggccaccaataaaatgcgttgt
ccgattttttgtatggcttggactccagaaggaagacgtctcgttaccggtgcctcgagt
ggcgagttcaccttatggaatggcctcactttcaattttgagactattctacaggcacac
gacagcccagtaaggacaatggtttggtcgcacaacgagagctggatggtaacaggggac
catgcaggctacgtgaaatattggcagagcaatatgaacaacgtcaagatgtttcaagcg
cacaaagaagcgattagaggactcagtttcagtccaacggatcacaaattggcgacctgc
agtgatgacggaactgtcagaatttgggactttcttcgctgtcatgaagaacgaattctc
aggggtcacggtgcagatgtcaaatgcgtgcattggcatccgcaaaagggtctagtcatt
tctggcagtaaagacaatcagcaaccagtgaaactgtgggatccaaaaactggccagtct
ttagcgacactccacgcacacaagtcgactgtgatggatgtcaaatggaacgaaaacggt
aactggttggtgaccgcgtcaagagatcatctattgaaattatttgatatcaggaatctg
agccaagaagttcagactttccgcggccataaaaaagaagcgtccagcgttgcttggcat
ccaagtcatgagggtctcttttgtagcggtggaagcgacggtgctatactcttctggcat
gtgggagcggacaaggaagtaggagcaatagaacaggctcatgatagcatagtctggaca
ttggcttggcatcctttgggacatatcttatgttctggtagcaacgatcacacatctaag
ttttggacacgtaacaggccgggagatcttatgagagataaatacaatctcaatacattg
ccagcgggctcggccggaattgacgatcacgaaatcgctgatgaagcagcagtaataccc
ggtatgggcccggaggatagaatcaatgccgatggtgaggccgaagataagagcggagga
atcccgggtctggacttggatcacgcggtggatgagggcaagaaatttgccaataagaaa
gtaccttatagcaaacctataccacggaacttccaagctcaatggaacgaaatggaggcc
gaggatatcgagcaggttgaagcactcaatgcatttgtcaatcaattgattgaaactacg
cctggtgccgtgccattgaacgaagttacgcctaatgccattatattgtacgggaaaatg
attcctgtagaagcgggctccaagctagcagaagcgatcagtaaaggaaccgacgctata
aacaaattagtattctcgggtgagatagaagagctacgagacgtggttggtccgccggac
aatacagacgaagctgaggagtatctgcaggacgatggtgagatcgattattcgaaagta
cccgacatcgatctcccaccgcctttgcctagttcaaagttcgcacaaaatcctgagcta
ttgaagacattaaatcgcggtggcaagcggaagtttgatcaactaattggctggagcgat
ggcggtgctagcgatcgcacgtccaagattcatcagccggtcttcggtggcgtgatgacg
gaggactcgcagtccagcgacactgatctgaggttcggcctcggtaagccaaatgttggc
gagagtaattccttccacggcgacgaggatcacaggcgaggtgcctctcacgatcccatg
aggagcagcaatcgcgacgacgaagatctgaggttcaacatatccggtcccggtaggccc
ggttcgcacgagtatgatccgcgcagcaacaatttcgctgataaggatttccgcatcagc
ggcttctcgctgttgaaaaagctggacaacgatatgtacgatgaccgagagcgcgatggt
acgagttctggccgctgggatgatgagaaggacgacggtcctcgcggcaaatcggacggc
gcgttcgctggcaacagcttcgacaagcgtgacagtagcatggcgatggttcccggcatg
ggtaacagtatgcacggtcacatggctggcatgcctcatctgtcgaatcatcacaacatg
caaaatatcaatcctaacatgccaccgccgataccgagtctcgtgccgcatcctaatatg
caacagcatcctggtatgcagggtaaacctcatcctggcatgcctggcatggatggctca
atgccgtcacatttgatggcgcaccatccaaacatgcatccaggcttcggtcccaacgga
ccaccgcctggcggtttcgggcccaatttccgaccgccgccaaatggcaattttggaccg
aaccactttaggccgagcccgatgccgccgttcggcccgaatcaaggtccgccgcctttc
ggcaataatttccaaggagcgcccaatttccgcggaccgaacgccggtccgatgagcttc
gaacggccaggctttgggcctaatttccgcgggcagaactcgcagggtcaattaaacagc
tttaactccaatttcggcaatttcggcaagaacggaccgaatcgcgttatgaaccgaggc
agtggtgacagaagtggttacaataatcgcagtagaggacgcgacaacgatcagtcgaga
agtgggaggggaagagacaattattaa

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