Ooceraea biroi (clonal raider ant): 105281116
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Entry
105281116 CDS
T05778
Name
(RefSeq) LOW QUALITY PROTEIN: rab GTPase-binding effector protein 1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105281116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105281116
Membrane trafficking [BR:
obo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105281116
Protein recycling
Rab4 associated proteins
105281116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab5-bind
FYVE
Rabaptin
zf-RING_5
FPP
IBR_1
Tropomyosin
Zn_ribbon_IS1595
IBR
Lebercilin
zf-RING_2
zf-RING_UBOX
ENOX1
zf-C3HC4_5
NPV_P10
Zn_ribbon_5
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
105281116
NCBI-ProteinID:
XP_026825613
LinkDB
All DBs
Position
5:complement(11510578..11514481)
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AA seq
645 aa
AA seq
DB search
MFVEFVSAAVTHPNKILFTRAXSDRTMENQDGQAVEVNGDENPQAKINRLELENIKMREE
FDVQRAKMKELFLQKEEELKWRLEENMGLQKENLRLKNELDEAKSQLVVADLKVQNDIMM
EKRKAQEEIASLQQVIHETVEESSCSRKQLVSDMSKLQLALTKLQEENTLLKTQLPRDPP
DGPQISLSTVTKTLARKVVSQLGADSLSLGPDNLEESMRKAQEDAEVLRSLVVPLEEEIK
ALKEKLRSTDDELQKCKETLVKRRQQEPGSFEPSCDMCANYEAQLVKVEATAKDLEKQVL
DSQRMLQAQKEDLAKEVEFRKEMEGKWNEKKEEHKIKVAELTVTSQTAQQHLVELKKTYE
QIQRNVSEELCKLTRGREEVQRHLTMLQKENENLVGKHSKHSQQLQSESINMPNTVEELH
ISLLKMREDLITARVGQEVAQEKGETLRYEVTLLREQMEQESRVKEQDISVLKNEISGLR
AQLDKYMRDHRTLADREEKLDRLEKQLQELQKEKKDAELAITELRQRVMSLQQELDTSEA
VQKDFVRLSQSLQVQLENIRQEDSEVRWQHEEDVEECPNCHNTFSVTKKKVHCRHCGHIF
CQSCLTRVVNSGPKQRPSRVCDVCHTLLVRDTAPYFSQEPPHTPT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcgaattcgtgtccgcggcagtgacccaccccaacaaaattctatttactcgc
gccnnaagtgatcgaacgatggagaaccaggacggtcaggcagtcgaagtgaacggagat
gagaatccacaggcgaagattaacagattagagttggaaaatattaagatgcgagaagag
tttgatgtacaaagagctaagatgaaagaattattccttcagaaggaagaagaattaaaa
tggagactggaggaaaacatgggcctgcaaaaggaaaatctcagattgaaaaatgaactg
gacgaagctaagagtcaactggtcgttgcggatcttaaagtacaaaacgacataatgatg
gagaaaagaaaagctcaagaagagatagcatctttgcaacaggttatacatgaaacggtg
gaggaatcttcttgttctagaaaacagcttgtcagtgacatgtccaaattacaactagct
cttactaagcttcaagaagagaatacactgttgaaaacgcaattgccacgcgatccacca
gacggaccacaaatctccttatctacagtaactaagacattagctaggaaagtggtttca
caattaggagctgattccttatctctaggccctgataatttagaagaaagcatgcggaag
gcacaagaagacgcggaggtcttacgttcactggttgtacctcttgaagaagagataaaa
gctttaaaagaaaagttaaggtcgactgatgacgaactgcaaaagtgtaaagaaactcta
gtgaagagacggcaacaagagcctggctcgtttgagccatcatgtgatatgtgtgcgaat
tatgaagcacaattagtcaaagtagaagcgactgccaaggatttggagaagcaggtgttg
gattctcagcgtatgttgcaagctcaaaaagaggatctagccaaggaagtcgaatttcga
aaggagatggaagggaagtggaacgagaagaaagaagagcataaaatcaaagttgcggaa
ctcacagttacctcgcagacggcgcaacaacacctggtagagttaaagaaaacttatgaa
caaattcaaaggaatgtttcggaagagctttgtaaattgacgcgaggcagagaagaagta
cagagacacctcactatgttgcagaaagaaaatgagaatcttgtgggtaagcatagcaag
cactcgcaacagcttcaaagcgaaagtataaacatgccaaatactgtcgaggaattgcac
attagtcttttaaagatgcgggaagatctaattacagccagagtaggtcaggaagttgcg
caagagaaaggagagacactgcgatacgaagttactttgctgagagaacaaatggagcag
gaaagtagggtcaaggaacaagacatttctgttttaaagaatgaaataagtggattgaga
gcgcaattagacaaatatatgagagatcatcgtacactcgccgatcgagaagagaaactc
gatcggctcgagaaacaactgcaggaacttcagaaagagaaaaaggatgctgaattagcc
ataactgaactacgacaaagagttatgagtttgcaacaagaattagataccagtgaagca
gtacaaaaggattttgtcagattatcacaatcattgcaggtacaactggaaaacattaga
caggaagacagtgaagtaagatggcaacacgaagaggacgtcgaagaatgtcccaactgt
cataacacgttctcagttacaaaaaagaaggtacattgtcgtcactgtggccatatattt
tgtcagtcttgcctcacgcgcgtcgtgaacagtggcccgaaacaaagaccatccagagtc
tgtgatgtttgtcatactttattagtgcgagatactgcaccatacttcagtcaagaacct
ccacacacacctacctag
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