Ooceraea biroi (clonal raider ant): 105281121
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Entry
105281121 CDS
T05778
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04068
FoxO signaling pathway
obo04120
Ubiquitin mediated proteolysis
obo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105281121
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
105281121
04150 mTOR signaling pathway
105281121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105281121
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105281121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
DUF7885
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_R13L1-DRL21
LRR_14
YtzH
Motif
Other DBs
NCBI-GeneID:
105281121
NCBI-ProteinID:
XP_011340432
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All DBs
Position
5:11486949..11490919
Genome browser
AA seq
550 aa
AA seq
DB search
MGRVGVDGGEVRIRIIPPKMNSGVAEHARLNKEPCLRKSKEFSPPESKRLHLDDGCNNNL
NSTLNNESQNTRWSYSGDVSLLEPEVLKDMGVGLLEENIINCGSTKKLQSDECTVLSACL
DNKQRLLANRVGSFEFEQEISTSSSSEINAERIQQDLDDLEDLAGFSNTENESGYSSRME
AEQFGDLKENLAKEKIDSLGKNMQERLEQFYLYKRKKKSVGEGENKFNKLSDEIILMILK
WLPKKSLVRCMLVCKRWNRIARDEVLWTRLDLGGKVLGEGTLGHILPRGVQILRLAQAEI
ADPVFCHGSTVLSDSYISKLQFLDLSMAVISPNGLAALLSKCKYLKKLSLEKCVINKDCC
IAISQSTELEILNLTMCENMDAACLANIMHLKRLTALNVGWCTLDNECTTLLCKTLPASV
TRLNIAGCRKTMTDENVKHLSKRCPNLIELDLSDCAMLTMNAVHHLLTFSKLEHLSLNRC
YSIPHTAYLRLAHMSCLLYLDVFGLMSEPVLKTLQSTCREPEINKFLYSSIARPTVGIRR
TSIWGHRVRD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagtcggcgttgacggcggtgaggttagaatacgtattattccgccaaaaatg
aattctggcgtagccgaacacgcgcgactcaacaaggagccttgcctgcggaaatccaaa
gaattttcaccgcctgagagcaaacgattacatttggatgatggttgcaataacaattta
aatagtacattgaacaatgagtctcaaaatacacgctggtcttattctggagatgtcagt
cttttagaacctgaagttctaaaagatatgggcgttggcttattagaggaaaatataata
aattgtggaagtacaaaaaaattacaatctgatgaatgcaccgttttgtcagcgtgttta
gataataaacaaagattattggcgaatagagttggtagctttgaattcgagcaggagatt
tctacaagttctagttctgaaattaatgcagaaagaatacagcaagatttggatgattta
gaggatttggctgggtttagcaatacagagaatgaatctggttattcttcaagaatggaa
gctgaacaatttggagatttgaaggaaaatttggctaaagaaaagatagattccctcggc
aaaaatatgcaagaacgtttagagcagttttatttatataaaaggaaaaaaaagtctgta
ggtgaaggtgaaaataagttcaacaagttgtcggatgaaatcattttgatgatattaaaa
tggttacctaagaagtctctggtacgttgtatgttagtatgtaaacgttggaatcggata
gctcgcgatgaagtattatggactagactagatttgggtggtaaagtgttaggcgaaggt
acattagggcacatattaccacgaggagtacaaattctaagactggcgcaagcagaaatt
gcggaccccgttttctgtcacggcagtacagtcctaagcgactcttacatcagtaaatta
caatttctggatttgtctatggcagtgatatcgccaaacggtttagccgcgttgttatcg
aaatgtaaatatttgaaaaagctgtcgctagaaaagtgtgttataaataaagactgctgt
atagctattagccaaagcacagagctagaaatcttaaatctaacgatgtgtgaaaatatg
gatgccgcatgtctggcgaatataatgcaccttaaacgcttaactgccctcaatgtagga
tggtgtaccttagataacgaatgtacgactttactttgtaaaacactgccagcatctgtt
acacgcttgaatatagcgggctgtaggaaaacgatgactgatgagaatgtgaagcatttg
tcgaagaggtgtccgaacctcatagaattggacttgagtgattgtgccatgcttacaatg
aatgctgttcatcatttgttgactttctcgaaattggaacatttatcgctcaatcgttgt
tacagtattccgcacacggcctatctaagattggctcacatgtcatgtttattgtattta
gatgtctttggcttgatgtcggagccggtactcaagacgttacagtctacttgccgtgag
cctgaaattaacaagttcctttatagttcaattgcaaggccaacagttggtatccgaaga
accagtatttggggccaccgagttagagattaa
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