Ooceraea biroi (clonal raider ant): 105281150
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Entry
105281150 CDS
T05778
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X2
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105281150
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obo01009
]
105281150
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105281150
03029 Mitochondrial biogenesis [BR:
obo03029
]
105281150
Protein phosphatases and associated proteins [BR:
obo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105281150
Membrane trafficking [BR:
obo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105281150
Mitochondrial biogenesis [BR:
obo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105281150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
105281150
NCBI-ProteinID:
XP_011340492
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All DBs
Position
5:11200269..11227628
Genome browser
AA seq
1301 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQSVSQLMEAIERECGVVAAHQVLLMSGGECLEPNARVCS
YSAGTDTNPIYLFSKAAIESTLPPTPSIDYGSDVDLQTQIDASLAMPATYQTLCARAHLA
QQCCGLAREQTRICERLVHDQHLQQQGWAAVVANLEDITVMFQSRTAQFEQAFVLYLNER
QRHMDLLDNFSADLGTLAKIPILPALRAQAEGLLSPDDQPSQSSEPAAEGNGEVLSLLRW
ISAKDNQSSLEQVADQCSRGLEQFDERLMETLKAEVNAAIDNAKKQDMKEIKGLSERLYA
LEQLMYQARRIVHEQGELTQGFLQNQSRASNLGDASVLPDLCTSHRRQLLVMLQNHNQLR
DIRRRCTKAKEELSMNIYHRLKWIMYVENKMVEVGNKLIIYHESLKRLRRHLEVLQQIHL
APQMYISAVIEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFDGHFLNTLF
PGLEDTPPPFATQAPSVFDNGLPKLTADDMESLRSQLPDLALTISTPDLNSITQFFLSKS
FTDGNKEKDATSVSTDIPSKEHERTRAPMLSDSVSIFRGGFESETDTEEFEKIGQAGVDM
SKPGVFDGTKQKRQKQLEENLGNTREEVERLRSILKTMKAVVCEELSSLRNELSILRDRS
NEGKSDLTDIKERVRVALSLYSQECDRRLQEREQEVTIEHELKMADVKKLMQEDCRNREE
EIRTLKGNLMEKEMELAEHGRLVATMRQKLEDEQIEKNNLQTRLHQQLENYSRILEQARI
DKEEAVKQTNDERFLEITSLTNSLTQCQKRIQELEENLATARSDQERMVKEATDKFQVEY
KAELETIRSRFKLMAASTMERSPSDSSLEKIERTDVIELANHEAILAQTKEDMKVENAMA
IRTAVEKERADCMAKLDNELSLAREVVVEKNKEIEIYRMRTAALIEQGKRYKNMIDQLIG
ELESKSEIRQTLKEKMKSLESDKGWLESKETAEKIMRTVLEHNENMYPLESGMCKGPRYD
RLDTSQVDLEEVFKDLESEKYEVEVSESKKVRLETDNDDLARLSRRLEALDNDNKRLSCE
LNSIRASKVAAEAKVEALVTDKIRLEIELLKEQTKRVFNIDSSVLSLENRDKEMNASVAV
VADASSASRDAATSPEPSRGSSSKSICFHPSHSSYIHKKVAEKVTKMVQLGIVTVTSCNP
GDIVLVVWDTVHCNYAVYQESTTLYFLHSDCVDALDVGMNPNGSRKCVLAEVIDKEYCHA
RKHENRYHVPRGTKFYRVRAKPRDGRALVDKTGSMSKSQLP
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacatatttcacgtcgacaccggcaccaccatcaccttcgacatcaagctggcc
ctgcaaagtgtcagccagctgatggaggcaatcgagagggaatgtggcgtggtggcagcg
catcaggtgctgctcatgagtggaggcgagtgcctggaaccgaatgcacgcgtgtgttcc
tactcggctggaaccgacacgaacccgatctatctgttcagcaaggctgccattgagagc
acccttccacccacgccgagtatagattacggttccgatgtcgatctccagactcaaatc
gatgcctcgctggcgatgccagccacttatcagactctctgtgcacgagcccatcttgcc
caacaatgttgcggcctagcgcgagaacagacgaggatctgcgagaggctggttcacgac
cagcaccttcaacagcagggttgggcggcggtggtcgcgaatctcgaggacatcacagta
atgtttcaatcccgaaccgcgcaattcgaacaggcctttgtcttgtatctcaacgagaga
caacgacatatggatctacttgacaatttcagcgctgatcttggtacactcgcgaaaatt
cctattctgccagccctcagagctcaagccgaaggcttgttaagtccagatgatcaaccc
agtcaatcatccgagcctgcagcagagggcaacggggaagtgctaagtctgcttcgatgg
atttctgctaaggacaatcaaagtagcttggagcaagtggcagatcagtgctcgcgcggt
ttggagcaattcgatgaacgattaatggagactttaaaggccgaggtaaacgcggccatc
gacaacgccaagaagcaggacatgaaagaaattaagggtctaagcgagaggctgtacgcc
ttagagcaattgatgtatcaggctaggaggatcgttcacgagcagggcgaacttactcaa
ggctttctgcagaaccagagtcgcgccagtaatttgggcgacgctagcgttctgcctgat
ctctgcacctcccatcgacggcagttacttgtcatgctgcagaatcacaatcagttgcgt
gacattcgtcgcagatgcaccaaagcaaaggaagaactttcgatgaacatctaccatcgc
ctgaagtggatcatgtacgtagagaataagatggtggaagtgggtaacaagctgatcata
tatcacgagagcttgaagcggctgagaagacatctggaggtgctacagcaaatccacttg
gctccgcaaatgtacataagcgcggtaattgaagtagttcgcagacggacattctctcag
gcgtttcttgtgtgggccagcaacttggcatgccaactactgacggtccacagcgaagag
ctggcgcgcaggcgagaatttcagagcaagttcgacggccacttcttgaacacccttttt
ccgggtctggaagacacgccaccgccctttgcgacgcaggcgccctccgttttcgacaac
ggactgcctaagcttacagcggatgacatggaatcgctgagatcgcaacttccagacttg
gcgcttacaatctctacgccggatttgaatagcatcacgcaattcttcttatccaaaagc
ttcaccgacggcaacaaggagaaagacgccacgtcagtgagcaccgatattccatcgaag
gaacatgagcgtactagagcgccaatgttgtccgatagtgtgtcaatttttagaggtggc
ttcgaatccgaaactgatacggaggaattcgagaagattggtcaggccggcgtggatatg
tccaaacccggcgtgttcgatgggacgaaacagaagcggcagaagcaattggaggagaat
ctcggtaacacacgtgaggaggtggaaagattgcggtccattctgaagaccatgaaggca
gtcgtgtgcgaggaactgagctcgcttcggaacgaattgtcaattctgcgagatcgatcc
aacgagggcaaaagtgacctcactgatataaaggagcgcgtccgagtagcattgtctctg
tactcgcaggagtgcgatcggcgccttcaagaacgcgagcaagaagttacaatcgagcac
gagttgaagatggccgatgtgaagaagctaatgcaggaggattgcagaaatcgcgaggaa
gagatccgcacgctgaaaggcaaccttatggaaaaagagatggaattggcggaacacggc
cgactagtggctacgatgcgtcagaaactcgaagatgaacagattgagaagaataactta
cagactcgtttacatcagcagctcgagaattactcgaggatactggagcaagcacgtata
gacaaggaagaggctgtgaagcagacaaatgacgagaggttcctcgagattacctctctc
acaaattctttgacgcaatgtcagaaacgaatccaggaattggaagagaatctggccacc
gctcgcagcgatcaagagagaatggtgaaagaagcaaccgataagttccaggtagaatat
aaggcggaattggaaaccattcggagtcgcttcaaacttatggctgcttctaccatggag
aggagtcccagcgattctagtctagagaagattgaacggaccgatgtcatcgaacttgca
aatcacgaggcgattctggcgcagacgaaggaagatatgaaagtagagaatgctatggca
atacgtaccgctgtcgagaaggagagagctgattgcatggcgaaattagataacgaatta
agtttggcaagagaagtcgtcgtggagaagaacaaagagatagagatatataggatgaga
acagccgcgttaatcgaacagggcaagcgctacaagaatatgatagatcaattgatcgga
gaactcgaatcgaaatcggagatacggcaaacattgaaggagaagatgaaaagtcttgaa
tcggacaaaggatggttggagagtaaagagactgcagagaagataatgcgaacggttctg
gaacataacgaaaatatgtatcccctcgaatctggaatgtgtaaaggcccgcggtacgat
cgattggacaccagtcaagtcgatcttgaggaagtctttaaagatctggagtcggaaaag
tacgaagttgaagtctcagaatcgaaaaaagtgcgattggagaccgataacgacgatctg
gcgcggttatccagacgacttgaggcactcgataatgataacaagagactatcctgcgaa
ttaaattcgatacgtgcgagtaaggtggcagctgaagcgaaagtagaggcattggtgacg
gataaaatccgtttagaaatcgagttactgaaggagcaaaccaaaagagtgttcaatatt
gattcgtcggtgttgtccttggagaatcgcgataaggagatgaatgcgtcggtcgcggtg
gttgcagatgcgagttccgccagtcgggacgcagctaccagtccagaaccgagtcgagga
tcatcttccaaatcgatatgcttccacccctcccattcctcatatatacataagaaagtc
gcggaaaaagtgacgaagatggtgcaactggggatcgtcacagtcactagctgcaatccg
ggcgacatagtactcgtggtctgggatactgtgcactgcaattacgccgtgtaccaggag
tctacaactctgtatttccttcactcggactgcgtggacgcactggatgtgggaatgaat
ccgaacggctcgcggaagtgcgttctcgccgaagtaattgataaggagtattgtcacgcg
agaaaacatgagaaccggtatcacgtcccgcgtggcacgaaattctacagagtacgcgcc
aagccacgagatgggcgcgcactggtcgacaaaacgggctcgatgtcgaagagtcaacta
ccgtaa
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