KEGG   Ooceraea biroi (clonal raider ant): 105281217
Entry
105281217         CDS       T05778                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105281217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obo03041]
    105281217
   04121 Ubiquitin system [BR:obo04121]
    105281217
Spliceosome [BR:obo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    105281217
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    105281217
Ubiquitin system [BR:obo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105281217
SSDB
Motif
Pfam: SART-1 HIND DUF1398
Other DBs
NCBI-GeneID: 105281217
NCBI-ProteinID: XP_026825681
LinkDB
Position
5:10046830..10051928
AA seq 745 aa
MGSNKRHKAEKSRDTKKKRHRSRSRSYTPDREKSEKHRHHKKHRRKERKDYDSDVEIVNA
PPPPKISKSSHPSTPPPPEISKQRSPSPVKGGASQVSLSIEETNKLRAKLGLKPLEVDNN
TPKEDPNKIKDDLGEFYHKPALNNNEKVRAQKLRDKISTQKEKRQIEANLSKLKSLGECD
SEDDTHAWITKSRHLEEEKKKAEKRAKMLDQLDEEFGIGNLVKEEIHSARNTAYTEKDLK
GLKVEHNIETLEEGKTVILTLKDQEVLNENDDLLVNVNMIDNERYKRSVLNKTKKSTYDP
YADENFDEYGFSKSTVLEKYDEEIDGEKKDNFVLGSNNVEVKRRQVETVKQRLANKRLES
LQMAEPKLASEYYNEEELAKFKKPKKKIRKIRKKLKADDLVPVDNDYLRDLGSRRKKKPE
DSKDNDAILDVDDLEAPTEDLTGVKLEEDDKELELQLALKKAQRLKEGHPAGMQKTIETL
KQEILSAEENQAGNIVLNSTAEFCRTLGDIPTYGLAGNREENGQELMDFELDGVKDEPSM
NEDEDDGRGAWNTVHLDENISEPVIMEAAILDAEPSLGQGVGGALQLAMSKGYLQKEDSN
RPSASRFAHLQAQNYSIEDKTYGDDDKFGRRDRFNGPTSDFKEKDGFKPNVKLEYIDDDG
HVLSAKEAFRYLSHKFHGKGPGKNKVEKRMKKAEQEVLMKRMSSTDTPLGTLNLLQAKQK
ETQSPYIVLSGSKQMQTTSIAKPKH
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgggttcgaacaaacgtcataaagctgagaaatctcgcgataccaaaaagaaacgtcat
cgcagtcgttctaggagttatacacctgaccgcgagaaatctgagaagcacaggcatcac
aagaaacatagaaggaaagagcgcaaggattatgacagtgatgttgaaattgtcaatgct
ccaccgccaccaaaaatatcaaagtcatcacacccatcgacgcccccaccacccgaaatc
tctaaacagcgtagcccatctcctgtgaaaggtggagcatcgcaagtttcactatctatc
gaggaaaccaacaagcttcgtgcaaagttgggactgaagccattagaggttgataataat
acaccgaaagaggatcctaacaaaatcaaagatgatttaggagagttttatcataaacca
gcgctaaataacaatgaaaaggttagagcgcagaaactgagagacaagataagtactcag
aaagaaaagagacagattgaggcaaatttgtcaaagctgaaatctttgggtgaatgtgac
tccgaagatgatactcatgcatggatcactaaatctagacatttggaggaagaaaagaaa
aaagcagagaagagagcaaagatgttagatcagttggatgaagaattcggaattggtaat
ttggtcaaagaagaaatacatagtgcccgtaacacagcatatacagagaaggatttgaag
ggtctcaaagttgaacataatattgaaacacttgaggaaggcaaaacggtgatattaaca
ctgaaagatcaggaagtattaaatgaaaacgatgatttacttgtaaatgtcaatatgatc
gataacgaacgttacaagcgtagcgttttaaacaagactaagaaatctacatacgatccg
tatgctgatgaaaatttcgatgaatatggattttctaaaagtacagttttagaaaaatac
gatgaggaaatcgatggcgagaaaaaagataactttgtattgggctctaataatgtggaa
gtaaagcggcgccaagtagaaacagtgaaacaacgtttagcaaataaaagattggaaagt
ctgcaaatggcagaaccgaaactggcaagtgaatattataatgaggaggaacttgcaaag
ttcaagaagccgaaaaagaagattcgaaaaattagaaagaaactcaaggccgatgattta
gttcctgtcgacaatgattatcttagagatcttggaagtagaagaaagaaaaaaccggaa
gattcaaaggataacgatgctatattggacgttgatgatctagaagctcctacagaagat
ctgactggagtaaagcttgaagaggatgataaagaattggaattacaattagccttgaag
aaagctcaacgtttgaaggaaggacatccagccggcatgcagaaaactattgagacacta
aagcaagaaatccttagtgcagaggaaaatcaggctgggaatattgttctcaattcgact
gctgagttttgtagaacgttaggtgatattcctacgtatggacttgctggaaacagagaa
gaaaatggacaagaactcatggatttcgaactggatggtgttaaagacgagccatctatg
aatgaggatgaggacgatgggcgtggtgcttggaacacagtgcatttagatgagaatatc
tcagaaccagttataatggaggcagcgatattagatgctgagccgtcgctcgggcaagga
gtaggcggagcgttacagttagctatgagcaaaggctacttacagaaagaggatagcaat
cggccctcagcatcacgatttgcacatttgcaagctcagaattattcgatagaagacaaa
acctatggagatgatgacaaattcggcagaagagatcgtttcaacggaccgacatctgac
ttcaaagaaaaggatggtttcaaaccgaacgtcaagcttgagtatatcgatgatgacggc
cacgtgttgagcgccaaggaagctttccgatatctgtcgcataaatttcatgggaaaggc
ccaggaaaaaataaggtggaaaagaggatgaagaaagctgaacaagaagttttaatgaaa
aggatgtcttcgacagacacgcctttaggtacactgaatttattgcaagcgaaacaaaag
gaaactcaatcaccatacatagtgctcagtggtagcaaacagatgcaaacgactagtata
gccaaaccaaaacattaa

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