Ooceraea biroi (clonal raider ant): 105281609
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Entry
105281609 CDS
T05778
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obo03009
]
105281609
Ribosome biogenesis [BR:
obo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105281609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
105281609
NCBI-ProteinID:
XP_026828311
LinkDB
All DBs
Position
9:11088580..11099229
Genome browser
AA seq
2753 aa
AA seq
DB search
MKNKPTRHKETNTFQFKPFSERITEIDVDIFHHVRHRNEDISEEIQTYFHETLQKWNVLN
LTEDYTTFKKQVRNIVTLPELLHRKRYVIDMLMEYLKKRDSLFLQPILELIVAVARDLQK
DFYEYFPEFLSEIVCLLQTKDAEQIEYTFTTLAYLFKYLWRYLIRNVRTVLALLLPLLAD
TQPVYINRFAAESFAFVVRKIKDKDSFLKLVLQILRDNVSGVLGYGKLLFEVVSGTPGQF
HSCAEQMLSVYFNALQDQSVDQNLTYQVLEEIVTCILQSIHPQKCDVMWNIILKMLDTFI
EKLNQSTLESDRQHALVLSLRLIHIIINYKNGKFLINPVSLTTRFAVLIDKNEDNNVLQE
VINASVAILLASNIKLMQEDSTQLLLKIMTVNDRDMLYSSVESLIHYSSFETLVLPNILR
RSISIGFDSETLLLFAKIIVAKSPPCLNGITLDKWKKYVFDIRNIGTENLNYFLLELKTL
STDSVSLNAIRILITLPHLKPMHEEFKDALKAGLLFSYETILKHENAEDAASINKIAFVF
LLTLESLIHVSEPRELHEFLENSKIAIINLVEKYYDNTYILNAIDLCLTYFAKSQHHVDY
INSTSFNILHNNVTKKMNSPYQKIRLTVTHLYSLFSDIDDLKNSSMPNSGKSAFELVHLV
ECESTTVQNYRAKLLRLQALEFQSPAISNLDPKYHEFPLRYLIGNLYINFSLLWEPVSAV
IASYGNKECSQFWPTFLNELTSNVSEIEWKPSFECQVVSSLEMLLEKHEDKPDLENHKIL
LWRCMTHFSHYAEMKNRDLTGLFIDFVNTNFFKSNSEDGKYCNVKKHKEKSPGVDNDTDE
NEDDEERDETAKAALADSKIRNYKVKLLIAQLQIFHKVLNPKMLYREAEMHQIYLDLLFS
KNVDVQKAALNCLFAYKHKYLLPYKESLFGLISEKNLKNELTRFKLDRESNVISEEHREN
LIPIVMRITYAKMVTKTSMRTGGKAGGFARRKMILRFLGGTQEDEMITFIKMAFKPFKSH
VSLETNDEAFNLRRCTENIVNTIDLHNVMPPKRMQSAVNLLAIIIEQFGGKMSTKLLPRL
LRILICILAEVTGILRRSEEVYLGYLPAIKIVRTNSIGILARFFTHFENYDWQQHEIDAL
YSVAIFPWLQKLPIEGIHSPTALLKLFMAWGQNSRYYPLFVKHQEGNESISPLPYVIQLL
LNPQTHQSVVNAILEIIEKMLTLYDYGKCNENAMEVDEPFLPLTPTLTNLLEVDKKTLSS
GVNYGSAVLLPHIPHILEFIKNKLKRSSKGINKTELLILSRISEFVSDAETCDTVLKLIL
PILIKKAAVNNEEAVMELLTTVINLVKIVDKPEIHIRTIAPLIGLVSDMPARKFLLRLYN
TIAERSSEQHRETMTRDCGILTALNAWDHKWVDQPDFQKRLDAFGEISRMVEKNAITLEF
GVTVMHNCFYFLKTESDLAMKDYSGQCLKLIGSRLAKEHQSNTVNRRYLMDDTILTLTRK
GIISRSETVRLQSLAFLGHMALECADVHPILRDLSLLTNRADPEVDFFENMQHLQLHRRA
RALLKFCTLAKTLQKPMNPKTLTQFILPLSSSYLCNEAFVHKNSLLDAAIETVGMVCRHL
PWHHYEIILKHYLNKLRSSTEYQKQLVRIVIGILDSFHYDLSKYKTAEEIPQIEAVSAQT
GDDVAAVDEKEPDATVGDENLEETEQEAEEKLEKALDDDNVENIEEIEKDNKANKGSVPI
IEKQTLLSQYGAKRVVSSISNGLLPQLHRSIVSKTRQDSKHKINRKKITSEIEEDDLLRV
PIALALVKLLQKLPESLLNANLPGIFIKLCTFLKSRMESVRRVTREILQKIMITLGPKYL
HHLLNEMNALLTKGYQVHVLVYTIQSVLLALKPYFQKFDINNNLQSILSVCKIDLFGLTA
EEKEVAGIVRNVSEAKSVKSYDIFHILAEFITESCLLDLILPLKEVLMKTHSHKTVHKVV
ECLRNVSLGLADNTYIRLEQMLVFLYGVVSESIPSLLPEKESGQSAEEEAKTLVRRQSDC
YIIPAEPKSRMGMKTAAKTTRHANVHVMIEFGLKLFHILLKRDKISSVEYKCYLEPFVTI
LGDCLSSQHVKLSTVALQCLNWMLKMDLASMQTSISSICTAMFSILYKYTTVGLSRGDNF
DLVMATFKCMAVIVRDVKHFNIDADQLKILILYAEQNLYDSDKQATAFTLLKAIIHRKMT
VPEMYTVMEKVAMLSITSELEHVKLQSRSVFYSYLMEYPLGKHLDKHISFYLTQLSYETQ
PGRMSALEMIHTIVTGFPLKALIIRSGLIFLMTGTRLINDDNPNCLKLCAKCIREMLARL
PSNKRNVLFDTVLTWLSDSKIRHRTLAAQLCGIFVTVEKNEFALRLPEVLPLLLKQFHAS
FAVSSNVEIGKCVKLKNLNHPEEDNKSKDPETLKDHHLFQVFQLLLKISAHCPAFLTNEK
YRDFMHSFAQYSQTLLAYPHIWVRLAATQLIGFILTSLDVDKVAEFLNNPTDNETQETHV
YSRSTDTLRSLILDLVAQLHPDMTFEELADQVVKNLIFIAKILKSIKGSAAKNNEEDNEK
NKEENNANLSLLPWLVRKLRKAVNVEITQAPKSTSVRTAVFKFIAGVVATIPTEHLNAIL
FSITSPLVREIATTEEANAELRRLAKEVATMIKKAIGNEEYAKLVNRVQQKLNIKRAERK
KARAQQFVVDPELAAKHKLTRQQKKKEAKKRKLNSMKGKKVIKKRKKPVDLEI
NT seq
8262 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaagccaacgcgtcacaaggaaacgaacaccttccaatttaaacctttctct
gaaagaattaccgaaatcgatgtcgatatcttccatcatgttagacatcggaacgaggac
atttccgaggaaattcagacgtattttcacgaaacgctacagaaatggaatgtccttaat
ctaacggaagattatactactttcaagaaacaagtgcgaaatattgtcacattacctgag
ctacttcacaggaagcgatatgtgattgacatgctcatggagtacctgaaaaagcgagat
tccttgttcctgcagccaatcctagagttaatagtagctgtagcaagagatcttcagaaa
gacttttatgaatatttcccagaatttttatctgaaatcgtttgcttgttacaaacaaaa
gatgcagaacagatagaatatacattcacaactctggcatatctgtttaaatacctatgg
cgatatttgataagaaacgtgagaactgtgctcgctttgttgttgccactcttggccgac
actcaaccagtctacataaataggtttgccgcagaaagtttcgcatttgtagttcgcaaa
atcaaagataaagattcctttttgaagttggtactgcaaattttgagagataacgtgagt
ggagtcttgggttacgggaaattactatttgaagttgtgtctggcactcctggacagttt
cactcttgcgcggagcaaatgttgtcggtttattttaatgctctgcaagatcaatctgtc
gatcaaaacctcacttatcaagtattagaagagatcgtaacatgtattttgcaaagtata
catccgcaaaagtgcgatgtcatgtggaatataatattaaaaatgctagatacatttatc
gaaaaattaaatcaatcgactctggaatctgataggcagcatgcgttagttttgtccctg
cgccttatacacatcatcattaactataaaaatggaaaatttttaattaatcctgtatct
ttgacgacgagatttgcagttctaatagataaaaatgaagataataacgttttacaagaa
gttattaatgcatctgttgccattcttttagcgtccaatattaaattaatgcaagaagat
tcaactcaattgttactgaagattatgacagtgaacgatagagacatgttgtactcttct
gttgagagtttaatacattactcttcatttgaaactttagtgttaccgaacatattgcga
cgtagcatttccatcggatttgacagtgagacgttgctcctgtttgccaaaataattgtt
gcaaaatcaccgccttgcctcaatggcataactctagacaagtggaagaaatacgtcttt
gatatacggaatattggaactgaaaatctcaattattttttgctggaattaaagacattg
tccactgattccgtttcactgaatgcgataagaatattaataactttaccacacttgaaa
ccaatgcatgaagaattcaaagacgcattgaaagctggattattattttcatatgaaacg
atattaaaacacgagaatgcagaggatgctgcaagtattaacaaaattgcatttgtattc
ttgttaacgttagaatcattgatacatgtatcagaaccgcgtgagcttcacgagttttta
gaaaattctaaaatagcaataattaatcttgttgagaagtactacgacaatacgtacatc
ttaaacgcgatagatctttgcctgacatattttgccaaatcgcaacatcacgtggattac
attaattctacgtcattcaatatattacataataatgtaacaaaaaagatgaattcaccc
tatcagaagattcggttgaccgtcacacatttgtattctttattttccgatatcgacgat
ctcaagaattcttcaatgccaaacagtggaaagagtgctttcgaacttgtgcatttagtg
gaatgtgaatccacgacagtacaaaactaccgtgccaaattgttgcgtctgcaagcccta
gaatttcagagtcctgcgatatctaatctagatccgaaatatcatgaattcccattacga
tacttgataggtaatttgtacatcaatttttctctactctgggaacccgtgagtgcagtt
atagctagttacggcaacaaagagtgttcacagttctggccaacgtttctgaatgaatta
acatctaacgtatcggaaatcgaatggaagccatcgttcgagtgccaagttgtttcctca
ttggaaatgcttttagaaaagcacgaggacaagcccgacctcgagaaccacaaaatcctt
ctttggagatgtatgacgcatttctcgcattacgccgaaatgaaaaatcgagacttaact
gggctgtttatcgattttgtaaatacaaactttttcaaatctaactccgaagacggcaag
tattgtaacgtcaaaaagcataaagagaaatcgccaggtgtagataatgacacggacgag
aacgaggacgatgaagaacgggacgaaactgcgaaagctgcgctagcggattcgaagatt
cgaaattacaaagtgaaactgttaatcgcccagctgcagatattccacaaagtgctaaat
ccgaaaatgttatacagggaggcggagatgcatcaaatttatctggacttgcttttctcg
aagaatgtcgacgtacagaaggcagccttgaattgtcttttcgcatacaagcacaaatac
cttttgccgtacaaggaatctctgttcggtttgataagtgagaaaaaccttaagaacgaa
ctgacgcgcttcaaacttgatcgggaaagcaacgtgataagcgaggaacaccgcgagaat
ctcataccaattgtaatgagaatcacgtatgcgaaaatggttacaaagaccagtatgcga
actggcgggaaagccggtggatttgcacggcgcaaaatgatattgcgctttttaggtggt
acgcaggaagacgagatgatcacgttcattaaaatggcatttaaacccttcaagtcacac
gtgtcgctggagacaaacgacgaagcgttcaatttaagacggtgcaccgaaaatatcgtt
aatacgatcgatttgcacaacgtaatgccacctaaacgcatgcaaagcgccgtgaatcta
ctggcgatcataatagaacaatttggcggaaaaatgtcgacgaagctgctgccgcgtttg
ctgagaatactaatctgcatcctggccgaagtgactggaattctacgaagatcggaagaa
gtctacttgggctacttaccggcgatcaagatcgtaagaacaaattctattggaatattg
gcaagattcttcacgcatttcgaaaactacgactggcagcagcacgagatagacgcgctt
tactctgtcgcgatattcccctggttgcaaaaattgcctatcgagggtatacatagccct
accgccttgctgaaactatttatggcctggggccagaactcgcgatattatccattgttc
gtgaagcatcaggaaggtaacgagtcgatcagtcctctcccctacgttatacagcttctc
ctgaatcctcagacgcaccaatcggttgttaacgctattctggagattatcgagaagatg
ttgacgctatatgactatgggaaatgtaatgagaatgcgatggaagtggacgaaccgttc
ctaccactgacaccaacgctcacgaacctactcgaggtcgacaaaaagacgctctcgagc
ggggtcaattacggctcggccgttcttctgccgcacattcctcacatcttggaatttatc
aagaacaagctgaagagatccagcaaaggcataaacaagactgagttgcttatattgtcg
cgaatttccgaatttgtcagcgacgccgagacatgcgatacagtgttgaaactgattttg
cccatattgatcaaaaaggctgcggttaacaacgaggaggctgtcatggaactgctgacg
accgtcataaatcttgtgaagatcgtggacaagccagagattcatatacgcaccatcgca
ccgttgataggcctcgtgtcggacatgcctgcccgcaagttccttctgcgactgtacaat
actattgctgaaagatcctcggagcagcatcgtgaaacgatgacacgggattgcggtatt
ttgactgctctgaatgcatgggatcacaaatgggtcgaccagccagatttccagaaaaga
ttggacgccttcggtgagatcagcaggatggttgagaaaaacgcgatcactttggagttt
ggcgtgaccgtaatgcacaattgcttttacttcttaaagactgaatctgatttggcgatg
aaggattactctggccagtgcctgaaactcattggctcgagattggcgaaggaacaccaa
agcaataccgtgaacaggcgctacttaatggacgacacgatcctgacgctcacgaggaaa
gggatcatcagcagaagtgagaccgtccgcctgcagtcgttggcatttttaggacacatg
gccctggaatgcgcagacgtacatcctattttgcgagatttatccttgctcaccaatcgc
gctgacccggaagtcgatttcttcgagaatatgcagcacttgcagttacacaggagagct
cgcgcgctgttaaagttctgtacgctcgctaaaacgttacagaaaccaatgaacccgaaa
actttgacgcaattcatccttcctctctcttcgtcatacttatgcaacgaagcttttgtc
cataaaaacagtctcctcgatgctgctatcgaaaccgtcggaatggtgtgcagacatcta
ccgtggcaccattatgagatcatcctgaaacattatctgaataaattaagaagctccacg
gagtatcaaaaacagctcgttagaatagtcataggaatactggactccttccactacgat
ctctccaagtataaaacggcggaagaaattccgcaaatcgaagcagtctcggcacaaacc
ggcgacgatgttgctgccgtcgatgaaaaagaacctgacgcaacggtcggtgatgagaac
cttgaagaaacggaacaggaagccgaggaaaaattagagaaagcactggatgacgacaac
gtcgagaatattgaagaaatagagaaggataacaaagcgaacaaaggaagcgtgccaata
attgagaaacagacgctactttctcaatacggagcgaagagagtagtgtccagtatatcg
aacggtttattgcctcaactgcatcggtctatcgtgagcaaaactcggcaggacagtaag
cataagattaataggaaaaagattacctccgagatcgaggaagatgatttactgcgagtg
cctattgctctcgcactcgtcaaattactgcaaaaactgcctgagagtcttttgaatgcg
aatctaccaggaattttcataaaactgtgtacatttcttaaatcacgtatggaatcagtt
cgacgagtaactcgcgagatattgcagaaaattatgataacattaggaccgaaatatctt
catcatcttctaaacgaaatgaacgcgttattaaccaagggataccaagtacacgttctc
gtttacacgattcagtcggtattgctcgcactgaagccctactttcagaaatttgacatt
aacaacaatctgcaaagcattctatctgtatgcaagatcgatctatttggcttaactgcg
gaagagaaggaggtagctggtattgtcagaaacgtatcggaggcaaagagcgtcaagagt
tacgatatttttcatatactagcagaatttataacggaatcgtgcttgctggacctgatt
ctgcctttaaaagaggtgctgatgaaaacgcattcacataagacggtacacaaagttgtg
gaatgccttcggaacgtatctctgggattggcagacaacacttacatacggttggagcaa
atgctcgtgtttctttacggtgttgtctcagagagcataccaagtctgttacctgaaaag
gaaagcggacaatccgcggaggaggaagcgaaaactctagtgcggcgacagtcggactgt
tacattataccggccgagccgaaaagtcgaatgggtatgaaaaccgcagcaaaaaccacg
aggcacgccaatgtccacgtaatgatagaatttggcttgaaactgtttcatatattgttg
aagcgggataaaatctccagtgtggaatataaatgttacttggagcctttcgtgacgatc
ttgggtgattgtctgagctctcagcacgttaagttgtctaccgtagcgttacagtgcttg
aactggatgcttaaaatggacttagcttcgatgcagacgtcgatatcgagcatctgcacc
gccatgttcagtattttgtacaaatacaccaccgtagggctcagcaggggcgacaatttt
gatctcgtgatggccacgttcaagtgcatggccgtgatcgtgcgcgacgtgaaacacttc
aacatcgacgctgatcagctgaagatcctaattttgtacgcggagcaaaatctgtacgac
agcgataagcaagccaccgcgtttaccttgctcaaggctataattcaccgaaagatgacc
gtccccgagatgtacactgtgatggagaaagtggcgatgctgagcatcacctcggaattg
gagcacgttaaactgcaatcgcgatcggtattctattcgtacctgatggagtatccgctt
ggcaagcacttggacaagcacatatctttttacctgacgcagttgagctacgagacgcaa
ccaggccgcatgagcgcgctagagatgattcataccatcgtcacgggatttccattgaag
gccttgattatacgatcaggacttatatttctgatgactggcacgagactgataaacgac
gacaatccgaattgtctcaagctctgtgcgaaatgcataagagaaatgcttgctcgatta
ccttccaacaagaggaacgtgctttttgacacggtcctcacttggctaagcgactcgaag
ataagacaccgaacgttagcggcgcaattgtgcggcatatttgtgaccgtcgagaaaaat
gaattcgctttgcgactacctgaggtgttgccgttattattgaaacagttccacgcaagc
ttcgccgtttccagcaacgtggaaattggaaagtgcgtaaagctcaagaatctaaatcat
ccagaggaagataataagtcgaaggatccagaaacgttaaaggatcaccacctgttccaa
gtatttcagttgctgttaaaaatatcggcacattgcccagctttcctcacgaacgagaaa
tacagggacttcatgcactctttcgcccaatatagccagactttattggcttatccgcat
atttgggttcgactggcagccacacaattgatcggttttatcttgacctcccttgacgtc
gataaagtcgccgagtttttaaataatccaacagacaacgaaacacaagagactcacgtg
tattcacgatccactgatactttgaggagtttaatcctagacttagtagcacagcttcat
ccggacatgacgttcgaagagttagcggatcaagttgtaaaaaatctcatttttatcgcg
aagatattgaagtcgatcaaaggatccgctgcgaaaaataacgaagaagacaatgagaag
aataaagaggagaataatgctaatctatctcttcttccttggctcgtaagaaaattgagg
aaagctgttaacgtggagataacgcaagctcccaaatcaacatcagtgagaactgcagtg
ttcaagtttattgctggtgtagtggctacaatacccacggagcatttaaatgcgatactg
tttagtatcacttctccgttggtacgcgagatagctacgacagaggaagcaaatgctgaa
ttacgtcgactagccaaagaggtagcaaccatgattaaaaaagctatagggaacgaagaa
tatgccaaactagtgaatcgagtgcaacagaaactgaatattaagagggcagaaagaaaa
aaggctcgcgcacaacagtttgtagttgatcccgagttggcggcgaaacacaaattgact
agacagcaaaagaagaaggaggcgaaaaaaaggaaattgaacagtatgaaagggaaaaaa
gtcataaaaaaacgtaaaaaaccggtagacctggaaatataa
DBGET
integrated database retrieval system
