Ooceraea biroi (clonal raider ant): 105281901
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Entry
105281901 CDS
T05778
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105281901
03036 Chromosome and associated proteins [BR:
obo03036
]
105281901
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
obo03037
]
105281901
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105281901
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105281901
UBL E3 ligases
105281901
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
105281901
Cilium and associated proteins [BR:
obo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
105281901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
zf-C3HC4
zf-C3HC4_2
PH
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-ANAPC11
zf-RING_10
zf-RING_UBOX
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
105281901
NCBI-ProteinID:
XP_026830325
LinkDB
All DBs
Position
13:5515461..5540098
Genome browser
AA seq
1359 aa
AA seq
DB search
MYSPLSPQASLSSELRQIINERNMLSMRSRMKVLHALNEDNERYAEERESTLRSQAIREI
LTTEVTYLQQLEILAKFFIQPILERKLLAHPLLTTLLENIKTLYNVSGELVAGLKHNSES
IAEVFRKLAPFFKLYSVYAYDYTQVLNLLQTSEESDPAFKKFICDQETRPEVGRKLSSLL
ITPVQRVPRYQLLVKEVLQHTPYRHREYRSLQACLVEIGKSAKHINSLIAQNEETQKLLN
LQRCINTSINLVKPGRMLIKQGPLMRVSRRGNSAYRRYFVLLNDTLLYCKGEPETSLSVS
CVLPLNKCSLTCVLSKKLFRVTCLHETFLLYSEKDDSDEWIQSIQGAIRKYTESRQTLRK
ESSSRKPLRHNNVIEFPSDDIPKKSVKRKRCRENEQILLDSSDIMYFKKDAQTDDAQQEN
SCLPLWRMNAKRFKRDEYPKADDIARRGTKRNVKSESCKGRSERTSAYGYSRKSKKSGCN
VEASAQHERSLCSVASSVGEHAPSPFRILSRFFTYVGTSIKDLFAFRQIAMEGSLEIKNS
SAGVEEPIKSEAPAQNSDSSERSEGAASPPPNCSICLGKLINTSFTDSCLHQFCFTCLLQ
WSKIKTECPLCKQTFKSIIHNVRSEEDYDQYHVPRELASQISQPQVTATLDVNFDVGGNW
DMAPRRFVYRTTMTGNRRHGVLLNPEQVARREQLPSITSQVSREERRRRRSNPLEYRRNI
YRHGIWATALPDVFGRFRECSAEFYRRQPQELNRLIPWLNRELQVLLLNNEPSHVAYLLN
IIIDALGQYDIRSLEFRNIVRPFFTIHTDHFAHELLNFAQTNFDLIGYDQSVTYMTRGLS
NEYTARILSPASSSSTTSTSTTSSNSSITSDYSDVRILDEAMDLRVNVEMPPTAPRSASH
PISMPGPSTVGQIFHRIDPYTPELLIISSTSSESEDGECEIIGYVKPRHERTPEIIELLS
SDSEHVVVHDAPSSQMTLRGTSPENLTLPSTSQEVHARGSSLSFSTSDEDSSDNDYSSKQ
SKRNNPKKSSGKKAAAQKHKRSYATKSRNKRSKKRRSSSSDSSSSESSLKKYNERRLRKA
RYKVQTKGAGRIKLIKKEENYLDFSSSSNSSSSETDSKTKADKSRRQHRSRRKCTLGSSD
RTAKSERTTRSKEMASALEKLRPKNKDQKYSESRQSRSRSVSESSNASDRDKRSSYSHRD
ARDTSDCGSRDDSASMNKDASRKERRSKSKKRGRYSSDSEDDRLRSSSQCSNHSNKSYSQ
WRKSKHKERKCKDKERHGSNSRALQSSENGALPVSASAKSDSYPTKHSDRSGSSGCKEKH
RSSRRVYKESKHKKSENEKKSRPKKKKRRLQSSSTSNSE
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaccactatcaccacaagccagcctcagttcagagttaagacaaattataaat
gagagaaatatgctgagcatgcggagccgtatgaaagttctacatgctttgaacgaagac
aacgagagatacgcagaagaaagggaaagcactctgagatcgcaagccattcgggaaata
ctgaccacagaagttacctacttacagcagctggagattttggcgaagttctttatacaa
cccatcctcgaaagaaagctactggctcacccgttgctcaccactttattggagaacata
aagacattgtacaatgtgagcggcgaactagtggcaggattgaaacataattccgagagc
atagccgaggtatttcgcaagctagccccgttcttcaagctgtactccgtttatgcttac
gactatacgcaggtgttgaatctgctgcagacgagtgaggagagcgaccctgccttcaag
aagttcatctgcgatcaggaaacaaggccggaagtaggtagaaagttgtcttcgctgttg
attacaccggtacagagagtaccgagataccaattactagttaaggaagtcttacaacac
accccttacagacacagggagtacagatctttacaggcctgtttggtcgagatcggaaag
tccgcgaaacacatcaacagcttgatcgcgcagaacgaggagacgcagaaactgttaaat
cttcagaggtgcatcaatacgtcgatcaatctcgttaaacctggcagaatgttgatcaag
cagggtccgctgatgcgcgtttcgaggcgaggcaattccgcctacaggagatacttcgtt
ctcctgaatgacactttgctctattgcaagggcgagccggaaacctcgctaagcgtgtcc
tgcgtcctaccgttaaacaagtgcagcctgacttgcgtcctaagcaagaaactgtttcgc
gtaacgtgcctgcacgagacgttcctactgtactcggaaaaggacgacagcgacgagtgg
atacaatctatacaaggcgctatcaggaagtatactgagagtagacaaactctgcgtaag
gaaagcagctcgaggaaaccactcaggcacaacaacgtcattgaatttccgtcagacgac
atacccaagaaatctgttaagaggaaaaggtgcagggagaacgaacagatactgctggac
tcctccgacattatgtattttaagaaagacgctcaaacggacgacgcacaacaggaaaat
agttgtttgcccctttggcgcatgaacgccaaaagattcaaacgcgatgagtatccgaag
gcagacgacattgctcgccgaggcacaaaaagaaacgtgaaatcagaatcgtgcaagggc
agaagtgagcgaacatctgcgtatggatattctcgaaaatcgaagaagagtggatgtaat
gtagaggcctcggcgcaacacgaaagaagcctatgctcggtcgcctcaagcgtcggagaa
cacgcgccatcgccattccgaatactcagtcgattttttacgtatgtcggtacatccata
aaagatctttttgcattcagacagatagcaatggaaggctcattagaaataaagaactct
agcgcgggtgtagaggaacctatcaaatctgaagcacctgcacaaaattccgacagtagc
gagcgaagcgagggtgctgcctctccaccgcccaactgtagcatttgcctaggcaaacta
attaacacgtcgttcacggacagttgcttgcatcagttctgtttcacctgcctgcttcag
tggtccaagataaagacggagtgtcccctgtgcaagcaaacgttcaaatcaatcatacac
aatgtacgatcggaggaggattacgatcagtatcatgtgcctcgcgagttggcgtcgcag
atctctcagccgcaggtcacagctacactggatgtcaacttcgacgtcggcggcaactgg
gacatggctcctcgtcgctttgtctacaggacaacgatgaccggcaatcgccgacacgga
gtgctgttaaacccggaacaagtcgccaggcgcgaacagctgcccagtatcacgtctcag
gtgtcgcgggaggaacgccgacgtaggcgcagtaatcccttggagtaccgtcgcaacatc
tacaggcatggtatatgggccaccgcgttacccgacgtgttcggacgtttccgtgaatgc
agcgctgaattttataggaggcagccgcaggaactgaaccgccttataccgtggttgaac
cgggagctgcaggttttgttacttaacaatgaaccgtctcacgtcgcgtatctgttgaac
ataataatagatgccttaggtcagtatgacattaggagcctggagtttcgcaatatcgtg
cggcccttttttaccatacacacggatcacttcgcgcacgagctgttgaattttgcgcaa
accaacttcgatctgattggatacgaccaatccgtcacttatatgacacgcggcctgtcg
aacgagtacacggctcgcatcttgtcgcccgcgtcatccagcagcactaccagcaccagc
actaccagcagtaacagcagcatcacttctgattactcggacgtacgaatactcgacgag
gcgatggatttgagagtgaacgttgagatgccgccaacagcgccgcgttctgcgtcacat
cccattagcatgcctggtcctagtacggtagggcaaattttccaccgaatagacccatac
acgccggaactgttgatcatctcgtcaacctcctccgagtcggaggacggcgagtgcgag
ataattggctacgtgaagccgcgtcacgagaggacgccggaaatcatcgagctgctttcc
tccgactccgagcatgtagtggttcatgatgcacctagctcccagatgactctgagagga
acgtctccagaaaacctgacattgccgagtacatcccaggaggtacacgcaaggggatcg
tccctgtcattttcgacgagcgacgaggacagttctgataacgattacagctcgaagcag
agtaagcggaacaatccgaagaagtcatcggggaagaaggctgccgcgcagaagcataaa
agatcgtacgcgacgaagagccgcaataagcgatccaagaagaggagatcgagttccagc
gactccagctcgtccgagagctcgctgaagaagtataacgagagacgactgaggaaggcg
cgatacaaggtgcagactaagggtgccgggcgaataaagctcatcaagaaggaggaaaat
tatttggacttttcgtcgagcagcaacagcagtagcagcgagaccgacagcaaaacgaag
gcggacaagtcgcgtcggcagcacagatcgaggaggaagtgcactctcggctcgagcgac
cgcacggcgaaaagtgagaggacaacgagaagcaaggagatggcctcggccctggaaaaa
ttgaggccgaagaacaaggatcaaaagtacagcgaaagtagacaatccagatctaggagc
gtcagcgagtcgtctaacgcatccgaccgagataagagatcgagctacagccaccgtgat
gctcgggacacgagcgactgtggcagccgggacgacagtgcctcaatgaacaaggatgct
tcgaggaaggagcgcagatccaaatcaaaaaagaggggacgttactcgtcggactcggag
gacgatcgtttgcgatcgagcagtcagtgcagcaatcactctaacaagtcgtactcgcag
tggagaaaatcgaagcacaaagagagaaagtgcaaagacaaggagcggcacggctcgaac
agcagggcgttgcagtcgagcgagaacggggctttgccggtgtccgcctccgcgaaaagt
gactcctatccgacgaaacattccgatcgcagtggttccagtggttgtaaagagaaacac
agatcgtcgcgcagagtctacaaggaatcgaagcacaaaaaatctgagaacgagaagaaa
tcaagaccaaagaaaaagaagcggcgcctgcaatcttcctctacctcgaattcggaataa
DBGET
integrated database retrieval system
