Ooceraea biroi (clonal raider ant): 105281991
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Entry
105281991 CDS
T05778
Name
(RefSeq) collagen alpha-2(I) chain isoform X1
KO
K19720
collagen type III alpha
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105281991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
obo00536
]
105281991
Glycosaminoglycan binding proteins [BR:
obo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105281991
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GFIT
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NCBI-GeneID:
105281991
NCBI-ProteinID:
XP_011341904
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Position
7:complement(5157945..5167934)
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AA seq
1256 aa
AA seq
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MWTGSSECSLAVFLFACTFLIDSDARAAPNGASAFSSAGSAVSSAGAFVGAFGGTGNFPG
IQNGHKEIRSYDSTGYFHDNDAGRGTKSYDTPSGHGAGHDHSIKGGGHDYNRNGDGCSKC
KWENDDYWERDEPEEEQNEDECDDGDDGQYRPQKPHHHDASGRGHAPGSHPSGVHKQGPT
GVYLDDGANAGVKGGRPGGINFPAAAGHAGSDSGFGGTTPKPGTNWNTPFASKPGYSGAA
AGPFRTTSWPKANTGTTPDFSLLWRPTSTSGYDSGSFVTTPRPGTNWNTGSGGKPGQEWS
TGPDGTPTTGFPSSRKPAPGWNAHDNRPGNFDSTPIPGSNWNTGLSTSTAAPWAGQDRSF
GTTPRPGQNWDIASGSKPGQNPWNPNYGATPDSQSDCTQSNLSCNQGKQVPVKVGATPIG
PTKSGEYPSAVFPATSHTGSDIPSSYGSPKQDQYGPYGQPGTQTAPSGVYAGTGVTSVSA
SHGRVPDFGKKDHPFGFDKPTYSQVPPDNRPYPSGIDQAYPNTGSDTYGPGNTPDYGKPG
HGSGPHNTWPSNVPTTFGNTKGPYEGINSPAAVPGAQGVTKPNYETSTYSWSTPGQIGSG
SSSWHGPGGTGPHAGFPTSNTIFSTTKNPFSYGSTPIASGNPYLGTGPNQFGFNIASSGA
NAGAGAFATSFDSHNTPGIIGTTTPSYGTTHKFRGTSYPGVKGYPGTTPYGTHPNIGNAW
PDAGSGTSPNRYPETVGNTWPTGQPGISNEPRGKPGDGSGIAPGRYPGSDGGIWPTGRPG
SVSGTTPGYFGTGSGNRPVEQPASGSGTWSDGQSKPAGGSGPGCSSITCASPTGSAAGSS
NCGSGNYNCGSSCSEGNYPTVHGPCDGPISGPSGVNKTYYPAGTGDGNVPNLGNTYRPNS
PSNNIGAGTYPGTGCGSGDSSCNQVGGTNIPEEPIKWNPANPFLFGTGGSTPSHVSRPWD
SGSTVKPLGVGNPFLDSSWSTPKPGYNANDKNVIPLGGENNKPIGQGNPFLDNSKTRGDI
NVDEGVIPLGGKPEGSNPFIRPESGSNGPSYGRHPVGFPGSEIPQSESHGDRNDGFHPGG
TSPQAGSNTGPYPTAGNPQSPLQCKLGIFGCGTPGSGSYAPTKGGKHPEGSFGGIGGSTN
AGAGIGSGPVSSPDHFNSAGYPGSAGSNVGSISGAGAYAGSFSNAQPSSFASPKSLPPSD
TRGVGNNFGQAYSGSWSSSGAQNVGGSNPWAASGASAFASSSAGSWSGNRPTNVKG
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgtggactggcagctccgagtgttccttggcggtgttcctttttgcatgcacgttttta
attgattcagatgcacgtgcagcacccaatggagctagcgctttcagcagcgcaggatcc
gcagtaagtagtgccggtgcatttgttggtgcgtttggaggaaccgggaattttcctgga
atccaaaatggacacaaggaaattcgtagctatgacagcaccggctacttccacgacaat
gacgctggtcgtggtacgaaatcttacgacacgccttcgggacatggcgccggccatgat
cacagcataaaaggcggaggtcacgactataataggaacggtgacggctgctctaaatgc
aaatgggagaatgacgattactgggaacgggatgaaccagaagaggaacagaacgaagac
gaatgtgatgacggcgatgacggccaatacaggcctcaaaaaccgcatcatcatgacgca
agtggtaggggacacgcaccaggttctcatccatccggggtgcacaaacaggggcctaca
ggcgtgtatctcgacgatggagccaacgcaggagttaaaggaggcagacctggtggtata
aattttcccgctgccgccggacatgcaggatcagatagcggctttggaggaaccacgccg
aaacctggaaccaactggaacactccattcgcgtcaaaaccaggatatagtggcgcggct
gcaggtcccttcagaacaacctcttggccaaaagcgaacacaggaacaacgccagatttt
agtttattgtggagacctacttcgaccagtggatacgacagtggaagttttgtaacaaca
ccgagacctggcacaaactggaataccggatctggaggaaaacctggacaagagtggagt
accggacctgatggtacgccaacaacaggatttccttcctcacggaaacctgcgcctggc
tggaatgctcacgataatagacctggaaatttcgattccacaccgataccgggatcaaac
tggaatactggactcagtacttcaacagcggctccttgggctggacaagataggagtttt
ggaacaacgccgagacctggacagaactgggatatcgcatctggtagtaaacctggccaa
aacccttggaatccaaactacggagctacgcctgatagtcagtctgattgtactcagtct
aatttaagctgtaatcaagggaaacaagttcctgttaaagttggtgcaacacctattggt
ccaacgaaaagcggcgaatatccgagtgctgtttttcctgcgacatcgcacacaggaagt
gacataccctcaagttatggaagtccaaagcaagatcaatatgggccatacggacaaccg
ggaacacaaacagctcctagcggtgtttacgctggaacaggtgtaacatctgtaagcgcg
tctcatggaagagtaccagattttggaaaaaaagatcatccatttggttttgacaagcca
acatatagccaagtcccaccggataacaggccatatcccagcggaatagatcaagcatat
cctaacactggtagcgatacttatggtccaggaaatactcctgattatggcaagcccgga
catgggagtggacctcataatacatggccgtcgaatgtaccaactactttcggaaacaca
aaagggccatatgaaggaattaattcacctgctgccgttcctggagctcaaggtgtcacc
aaaccaaactacgaaactagtacctattcctggtcaactcccggccagattggaagtgga
agcagtagctggcatggtccgggaggtacaggtcctcacgctggatttcctacgtcaaat
actatattttcaaccactaaaaatccgtttagttacgggagcacgccaattgcatccggc
aatccttatctcggaacgggaccaaaccaatttggttttaacatagcaagtagtggtgcg
aacgctggtgcaggcgcgtttgcaacatccttcgattctcataatactcccggtataatt
ggaactactacaccttcttatggtacgacacacaagttcagaggtacaagttatcctgga
gtcaagggttatcctggaactactccttacggcacgcatcctaacattggaaatgcttgg
cctgatgccggaagtggaacttcgcctaacagatatcctgaaaccgtagggaatacttgg
cccacaggacaacctggaatcagtaatgaacctagaggaaaacctggagatggaagtggt
attgcacctggccgatatcctggaagcgacggtggaatttggcccactgggagacctgga
agcgtaagtggaactacacctggttattttggaaccggaagtggaaataggcctgtcgaa
caaccagccagtggaagtggaacttggtcagacgggcaatctaaaccagccggtggaagc
ggacctggatgttcaagtataacttgcgcaagtcctactggttcggctgcaggaagcagc
aattgtggaagcggaaactataattgtggcagcagttgcagtgaaggcaattatccgacg
gtacatgggccatgtgatgggccaataagtggtcccagtggtgttaataagacatattat
cccgctggaactggtgatggcaatgttccaaatcttggcaatacatataggccgaattca
ccttctaataatattggtgcgggaacttatcctggaacgggatgtggaagtggagatagt
tcatgtaatcaagttggaggcacaaatataccagaagaacctataaaatggaatccagca
aatccatttttgtttggaactggaggcagtactccaagccatgtttcacgcccctgggat
agtggatctacagttaagccattaggtgtaggaaatccgttccttgattccagttggagt
actcctaagccagggtataatgcaaacgataagaatgtaatccctcttggaggtgaaaat
aataagcctatcggccaaggcaatcctttcttggacaacagcaagacaagaggagatatt
aatgtggatgaaggagtgattccactcggtggaaaacctgaagggagtaatccttttatc
agacctgaaagcggaagcaatggtccatcatatggtagacatcctgtcggatttcctgga
tcagaaataccgcaaagtgagagtcatggagatagaaatgatggttttcatcccggagga
acttcaccgcaagctggaagtaatactggaccgtatccgacggcagggaatcctcaaagt
ccattacagtgtaagctgggtatttttggttgtggaacacccggtagtggaagttatgca
cctacgaaaggtggcaagcatccagaaggatcgtttggcgggatcggtggatctacgaat
gccggtgctggaatcgggtccggcccagtatccagtccagaccattttaatagtgcagga
tatcctggatcagcaggaagtaatgtaggatccatcagtggtgcgggagcttatgctgga
tccttcagcaacgctcaaccttccagttttgccagtcctaaatctttacctccctctgat
acaagaggagttggtaataattttggccaagcctatagcggaagttggtcttccagtgga
gcgcaaaacgtaggtggatctaatccttgggctgccagcggtgcttctgcctttgccagt
agtagtgccggaagctggtcaggaaatcggcccaccaacgtaaagggctaa
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