Ooceraea biroi (clonal raider ant): 105282010
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Entry
105282010 CDS
T05778
Symbol
Taf5
Name
(RefSeq) TATA-box binding protein associated factor 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105282010 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105282010 (Taf5)
03036 Chromosome and associated proteins [BR:
obo03036
]
105282010 (Taf5)
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105282010 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
105282010 (Taf5)
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105282010 (Taf5)
STAGA complex
105282010 (Taf5)
TFTC complex
105282010 (Taf5)
SAGA complex
105282010 (Taf5)
SLIK complex
105282010 (Taf5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_2nd
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_Aladin
Beta-prop_WDR75_1st
ANAPC4_WD40
DSE1_N
Beta-prop_TEP1_C
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
PAC11
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_NOL10_N
WD40_like
PEP5_VPS11_N
WDR54
Cytochrom_D1
Beta-prop_DCAF12
ERp29
Motif
Other DBs
NCBI-GeneID:
105282010
NCBI-ProteinID:
XP_011341949
LinkDB
All DBs
Position
7:complement(5299412..5302691)
Genome browser
AA seq
650 aa
AA seq
DB search
MEKNAMVAVLQLLKKYNLKGTEELFRKEANLTDVTIDDTQQTDSEVTSVLSAYKSEGDPA
QYEKAYSELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSEEAKQLMEKFSENLE
EYYQGDLKRLSNVTKREQMAGNEITDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLLNI
IQEHLYFDMYEGVARNKEQIDAISGAMGGEATRQDNKAKVYYGLLKEPDIQCVPPAEEEE
DDTAGGDGDKPKKKKAKKDPLFSKKTKSDPNAPSVGRMPLPNLKDADKLEKVKALREASK
RVVLGSDTLPSICFYTLLNAVHTVTTAEVAEDSSLLAIGFADSGIKVWSLIPQKLRLMKT
GEQLQDIDREADDVLVRMMDDRTAETARNLYGHSGPIYSLSFSPDRNLLLSSSEDTTIRL
WSLHTWTCVVCYKGHLFSVWCVKFSPHGYYFASTSNDKTARLWATDSHQPLRIFAGHYSD
VDVVQFHPNSNYVATGSSDMTVRLWDCVTGNQVRLMTGHKGPIYSLAFSAEGRFLASAGA
DTRVLVYDLAHGHLVAALSGHTGNIHCLSFSRDGNILVSGSLDYTLKLWDFTKLAEEMSL
EDVNVSHNPDVKTNAESYLLRTFPTKTTSVLTLHFSRRNLLLGVGMFDST
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaacgctatggttgctgttctgcagcttctgaagaaatataatttaaaggga
accgaagaattatttagaaaggaagctaacctaacagatgtcacgattgatgatactcaa
caaactgattccgaggtgaccagcgtcctgtctgcttacaaaagcgagggagatcctgca
cagtatgagaaagcgtacagtgaattgaagaaatttgtagaaggagccctggatatttat
aagcatgaattgggtactatattgtatccagtattggtacacatgtatctggagctagtt
tacaataaccattctgaagaagcgaaacagctcatggaaaaatttagcgaaaatttagag
gaatattatcagggtgacttgaagagattatccaacgtgacaaaacgtgagcaaatggca
ggaaatgagataacggatacctttaaatcaaatcagttcataatcaggatgtcgagggac
accctttctatattgaagcgacacttacaagagaagaaacacagcgtcttattaaatatc
atacaggagcatctctattttgatatgtatgaaggcgtcgctcgtaataaggaacagata
gacgcgatatctggagctatgggaggggaggctaccaggcaagataataaggccaaagta
tattatggacttttgaaggagccagatatccagtgcgtaccgccggccgaagaagaagag
gacgacacagctggcggagacggagacaaaccaaaaaagaaaaaggctaaaaaggatcct
ttattctcgaagaaaactaagtcagatccaaatgcaccgtccgtaggcagaatgcccttg
cccaatttaaaagatgcggataaactggagaaagttaaagcactgagggaagcatcgaaa
agggttgttctgggatctgacacgttaccatccatatgcttttacacattgttgaacgcg
gttcatactgtaactacagcagaagtagcggaagattcaagtttattagctatcggattt
gcggattccggtataaaagtatggagtttaattccacaaaagctgagactgatgaaaacg
ggtgaacaactgcaagatattgacagagaagcagatgatgtattggtcagaatgatggac
gatcgaacagccgaaactgcaaggaatctgtatggccatagtggaccaatttacagtctt
tcattcagcccggatagaaatctgttactttcatcatcagaagataccacaataaggcta
tggtcactccatacgtggacttgcgtggtctgctataaaggccacctcttttcggtatgg
tgcgtaaagttctcgccacacggttattactttgcaagtacttcaaacgataaaactgct
aggctgtgggcgactgattctcatcaaccgttacgaatatttgccggccattactcggac
gttgacgtagttcagtttcatccaaattcaaactacgtcgcgactggctcgagtgacatg
accgtcagattgtgggactgcgtgaccggtaaccaagtgcgactaatgactgggcacaaa
ggaccgatctactctctcgccttctcggcggaaggacgatttttggcgtcagccggcgcc
gatactcgagtactcgtgtatgacctggcacacggtcatcttgttgcggctctatccggt
cacaccggtaacatacattgcctctcgtttagtcgagatggcaatatcttagtttcagga
tctttggactacacgctaaagttgtgggacttcacgaagttagcagaagagatgagttta
gaggacgtcaacgtttcgcacaacccagacgtgaagaccaacgcggaatcgtatctattg
cgtactttccctacaaaaactacgtctgtcctgacgttgcatttttcgcggagaaattta
ttgctaggtgttggtatgtttgattcgacataa
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