Ooceraea biroi (clonal raider ant): 105282289
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Entry
105282289 CDS
T05778
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obo03000
]
105282289
03036 Chromosome and associated proteins [BR:
obo03036
]
105282289
Transcription factors [BR:
obo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
105282289
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
105282289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PH1_SSRP1-like
PK_Tyr_Ser-Thr
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
Kinase-like
HMG_box_2
ABC1
SSRP1_C
GRAM
Motif
Other DBs
NCBI-GeneID:
105282289
NCBI-ProteinID:
XP_011342461
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All DBs
Position
10:6512460..6524444
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AA seq
1178 aa
AA seq
DB search
MDNKITICDPDEEEIENDLLRDIEPVMWINDDPNYDLDEINMFFHRVDSDQIIYKEKKKK
CKFIGKYVMGDVLGEGSYGKVKEVLDSQTLCRRAVKILKKRKLRRIPNGEQNVQREIKLL
RTLKHKNVINLVDVLYSDEKEKMYLVMEFCVCGLQDMLESTPTKKLPLWQAHDYFCQLLD
GLEYLYSKGIVHKDIKPGNLLLTVDGTLKISDFGVAEALDTFSKDDTCTIGQGSPAFQPP
EIANGCESFSGFKVDIWSSGVTLYNITTGLYPFEGDNIYKLYENIGRGEYTIPKDVEEPL
KSLIEGMLQKDADKRFTLQQVKRHCWTVRKHPKTQKEVPIPPLKSNGCHRMTVLPYLMEY
HQDGVDDNPVYYTEHQLNEERRLEELDRISEDGKSGRNSHRAKSNSNGQNKRRWRKPISC
ISIKRFPSCKPSRFVERSGNVPLEEKMDFLEYPDIFAEVKGAMTPGRLKLTDQHLIFKNQ
KTGKVEQISASDMEMVNYQKFIGTWGLRIFLKNGTLHRFKGFKEADQEKIAKFFSINYKK
DMLEKELSLKGWNWGTAKFSGSILSFDVGHHTAFEIPLYDVSQCNTGKNEVTLEFHQNDD
APVSLMEMRFHIPVSDSVDQDPVEAFHQQVMEKASVISVSGDAIAIFREIHCLTPRGRYD
IKIFQSFFQLHGKTFDYKIPMSTVLRLFLLPHKDNRQMFFVVSLDPPIKQGQTRYHYLVL
LFNQEEETSIELPFTEKELKEKYEDKLTKELSGPTYEVLGKVMKVIINRKLTGPGHFTGH
TGTPAIGCSFKAAAGYLYPLERGFIYVHKPPIHIRFEEIASVNFARGGGSTRSFDFEIEL
TSGVVHTFSSIEKEEYGKLFDFITSKKLRVKNRGKSDKLNYDEDFGDSDQEDEPDAYLAR
VKAEAQERDGDENQDSEDASSDEEFKPNQDESDVAEEYDTDANSSESDEDSDASAASHKK
EKKEKEKEKKKPKTAKTAPKKTRKSRKPKKQKDANRPKRPPTAFMLWLNSTRESIKADNP
GIAVTEIAKKGGEMWRELKDKSEWEAKAAKAKKEYAASIKEYEASGGGKAKEKKEKTEKK
KKETKKDSPSKMMTGTAFKSKEYISDDDSSSDESKKSEKKQSQNNESEEEKRKKKKRPVE
SSGKKTTKKAKRESDESDAEEPVESTPPSSDAESKDSD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggacaataaaataacgatatgcgatcccgacgaagaagagatagaaaacgatttgtta
cgtgacatcgaaccagtcatgtggatcaacgacgatccgaattacgatctggacgagatc
aacatgttttttcacagggttgattcggatcaaataatatacaaggaaaagaagaagaag
tgtaaatttataggtaaatacgttatgggcgatgttctcggcgagggtagttacggcaag
gtgaaggaggtactggattcacaaacgctctgccgaagagcggtcaagatattaaagaag
agaaaacttcggaggatacccaatggggaacagaacgttcaacgagaaataaaattgtta
aggacattgaaacacaaaaacgtgataaatcttgtggacgttttatacagcgacgagaag
gagaagatgtatctcgtcatggaattctgcgtatgtgggttacaggacatgttggaaagc
acaccgaccaagaagctcccgctttggcaagcacacgattatttctgccagctgttggat
ggtttggagtatctctacagcaaaggaatagttcacaaggacatcaagcctggaaatctg
ttgctcactgtagatggtactctgaagatcagcgacttcggcgtcgcagaggcattagac
acgttttccaaagacgatacatgtacgataggtcaaggatccccagcgtttcaaccaccg
gaaatcgcaaacggctgcgagagcttctcaggtttcaaagtagacatatggagcagcggt
gttacattgtacaacataacgacaggtttatatcctttcgagggggataacatatataag
ttatacgaaaacatcggaaggggtgaatatacgataccaaaagacgtagaagaaccttta
aaatcgctgatagagggaatgttgcagaaagacgcggacaaaagattcacgttgcaacag
gtcaaaagacactgttggacggtacgcaagcacccgaaaacacagaaagaagtgccgata
ccgcctctcaaaagtaacggctgtcacagaatgaccgttctgccatacctgatggagtac
catcaggacggagtcgacgacaaccccgtgtactacacggaacaccaattgaacgaagaa
cgaagactcgaggagctggatcgcatcagcgaggatgggaagagcggtcgcaacagccat
cgtgcgaaatccaatagcaacggtcagaacaagcggaggtggcggaagccgatctcgtgc
atcagcatcaagagattcccatcctgcaagccgtcacgattcgtcgagcgcagcggaaac
gtaccccttgaggagaaaatggattttttagagtatccagatatttttgctgaggttaaa
ggcgctatgacgccgggcagactaaaattgaccgaccagcatctgatctttaaaaatcag
aagactggaaaggtcgaacagatctctgcctctgacatggagatggtaaactaccagaaa
tttattggaacctggggtttgcgcatcttcttgaagaacggcacgttgcaccgtttcaag
ggattcaaggaagccgatcaggagaaaatagccaagttcttttccatcaattataagaaa
gacatgttggagaaagagctgagcttgaaaggatggaactggggtaccgcaaaattcagt
ggatctatcttgagctttgatgttggccatcacactgcttttgaaatacctttgtacgat
gtatcacagtgtaacaccgggaagaatgaagtgaccctggaatttcatcagaatgacgat
gctccagtcagtctgatggagatgagatttcatattcctgtcagtgacagtgtcgatcaa
gatccagtggaggcattccatcagcaggtgatggagaaggcatctgttatcagcgtgagc
ggcgatgcgattgccatattcagggagattcactgcctaacgccccgtggtcgttacgac
atcaaaattttccaatctttcttccaactgcacggcaagactttcgactacaaaattccc
atgtcgactgtgctgagactcttccttctgccgcacaaggataatcggcaaatgttcttc
gtcgtgagcctggatcctcccataaagcaaggccaaacgcgatatcattacctggtgctg
ctgttcaatcaggaagaggaaacgtctatcgagctaccgttcaccgagaaagagctgaag
gaaaagtacgaggacaaattaacgaaggaattatcaggaccgacgtacgaagtacttggc
aaggtgatgaaagtgatcattaatcggaagttgacggggcctggccacttcactggtcac
accggaactcccgcgattggttgttctttcaaagctgcggcggggtacctgtatccgctc
gagcgaggcttcatttacgtgcacaagccgccgatacacatccgtttcgaggagatagca
tcggtgaattttgcgcgcggcggcggttcgactagatccttcgactttgaaatcgagctt
acgagcggcgtggtgcacacgtttagcagtatcgagaaagaggagtacggcaaactgttc
gatttcattacgtcgaagaagctccgcgttaaaaatcgcggtaagagcgacaagctcaat
tacgacgaggacttcggtgacagcgatcaggaggacgaaccggacgcctatttggcgcgg
gtgaaggcggaagcacaggaacgcgacggcgacgagaatcaggactccgaggacgcctcg
tccgacgaggaattcaagccgaatcaggatgagagcgacgttgccgaagagtacgacacc
gacgccaacagttctgagagcgacgaggactcggatgcgtccgcggcgagtcacaagaag
gagaagaaggaaaaggagaaggagaagaagaaacctaaaacggcaaagacggctccgaag
aagacacggaagtcgaggaaaccgaagaaacagaaggacgcgaatagaccgaagaggcca
ccgacggcgttcatgttgtggcttaacagcacacgtgagagcatcaaggcagataatccg
ggaatagctgtgacggaaatcgcgaagaagggtggcgagatgtggcgagaactcaaggac
aagtccgagtgggaagcgaaagcggcaaaggcgaaaaaggagtacgcggcatcgataaaa
gaatacgaggcgagcggaggtggtaaggctaaagagaagaaggaaaagacggagaagaag
aagaaggaaaccaagaaagattcgcctagcaagatgatgactggcaccgcatttaagagc
aaggaatacatcagcgacgacgacagcagcagcgacgagagcaagaagtccgagaagaag
caatctcaaaataacgagagcgaagaggagaaacgtaaaaagaagaagcgacctgtggaa
agtagtggaaagaagacgacgaaaaaagccaaacgggagtcggatgagagcgacgcggaa
gaacccgtcgagagtactccgccgtcatccgacgcggaatccaaggacagtgattaa
DBGET
integrated database retrieval system
