Ooceraea biroi (clonal raider ant): 105282576
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Entry
105282576 CDS
T05778
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obo03009
]
105282576
Ribosome biogenesis [BR:
obo03009
]
Eukaryotic type
90S particles
Other 90S particles
105282576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_SCAP
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_SPT8
Cytochrom_D1
KIAA1549
Beta-prop_WDR35_TULP_N
DUF374
Motif
Other DBs
NCBI-GeneID:
105282576
NCBI-ProteinID:
XP_011342935
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Position
4:7168947..7171907
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AA seq
475 aa
AA seq
DB search
MSFFIRSGGRGGGARKRKRMNEHNGYLGKTTTTQSTSKQSKQSKKKNKSLPNDDESIAST
DEEFAEENLKNERKFESETEEEEETAQEKRLRLAKKYLQEIEEEEKDRAEFEENAVAKRL
REEYLEEKGRLRKTIAINYVGHGELISLRCKEHKGSITCLCLSSDGSVLYSGSKDGSLVK
WSLKEKIKLNAIRGKRGKTKDGMTSIRCLATSTDGKFLVVGDDGCKDIKVLSGDTLNHIK
NLQGHRGLVVGLAFRKDTHTLYSASEDKSVRVWNLDDMAYVESLFGHQSGITYIDALSRE
RAITSGGFDGTIRIWKIVEESQLIFNGHDNGHSIDAVKLINEEAFFSGGSDGQLCVWGCQ
KKKPLCSVTEAHGRDEVNGQPMWISSIATLLNTDLVASGSRNGVVKVWHCGENFRSLNLL
FEVQLVGFINALAFTPDGNHLVAGVGKEHRNGNWWKVPDARNAIVIIPLTHKNKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttttcataagaagtggaggacgaggaggtggagcacgtaaacgcaaacgtatg
aacgagcacaatggttaccttggaaaaacaactacgactcagtctacatcgaagcagtcg
aaacagtcaaagaagaaaaataaatccctacctaacgacgatgaaagtattgccagtaca
gatgaagaatttgcagaggaaaatttaaaaaatgaacgaaaatttgaaagtgaaactgaa
gaggaggaggaaactgcgcaggagaagcgtttgaggcttgcgaagaaatatcttcaagaa
attgaagaagaagaaaaggacagagctgaatttgaagagaacgcagttgcgaagagatta
cgcgaagagtatttggaggaaaagggtcgattaagaaaaactatagcgatcaactatgtt
gggcatggagagctcatttcattgcgatgtaaagagcacaaaggctctatcacttgtttg
tgcctttctagcgacggcagtgtactatattcaggttccaaggacggcagtttagttaaa
tggtcactaaaggagaaaattaaattaaatgccattagagggaagagaggaaaaacgaag
gacggaatgacttccatacggtgtttagcaaccagcacggatggaaaatttctggtagtg
ggagatgacgggtgtaaggatatcaaagtgctttctggcgatactcttaatcacataaag
aatctgcaggggcacagaggcctcgtagtcggattggcattccgcaaggatactcacacg
ctgtactccgcgtccgaagacaaaagcgtaagagtttggaatctggacgacatggcttac
gtcgaatccttattcggtcatcaaagcggtatcacgtacatcgacgcactgtcgcgagaa
cgcgctataacgagcggcggtttcgatggcactattagaatatggaagatagtcgaggaa
tcgcaattaatatttaacgggcacgacaacggccatagcatcgacgcggttaagctcatt
aatgaagaggccttcttcagtggtggaagtgacggacagctctgcgtctggggatgccag
aaaaagaagccgctgtgctctgtgacggaggctcacggaagggacgaggtcaacggtcaa
ccaatgtggatctcgagcattgcgacgttgttgaatacagatctggtagcgtcaggatcg
cggaacggtgtggtcaaagtgtggcactgcggcgaaaacttcaggtctctcaatctcttg
ttcgaggttcaattggtaggttttataaatgcgctcgcgttcacgcccgatgggaatcat
cttgtcgctggtgtaggaaaggaacataggaatggaaactggtggaaagtaccagacgca
aggaacgctattgttatcataccattgacgcataaaaataaaaaatga
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