KEGG   Ooceraea biroi (clonal raider ant): 105282834
Entry
105282834         CDS       T05778                                 
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03013  Nucleocytoplasmic transport
obo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105282834
   03015 mRNA surveillance pathway
    105282834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105282834
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105282834
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 105282834
NCBI-ProteinID: XP_011343392
LinkDB
Position
7:16506578..16512560
AA seq 799 aa
MSDTRRRRKSNQSCGSDDLSDSYEELNATKETQSSEQTDGHQDSECDIYESESDGESQEG
GELRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTDNNTETQTNTK
ETKEKKVWKDKEDRWDHDRYNDEEQAPKRPEELIATYGYDIRNEEGPPRARRRRRYGRGP
NKYTRNWEDEDAYGKTTPGRGNIRRFQKNNEDFPALSNNKNASSKVEEPVISSAWYSSKN
KTQKTQNFPPLQPQQDNAKTKSATVPNTPTNESKVPDDSTNTSWKKDDKHIIQNQNTNGN
SGSGDAEKSVNAKPSPRENNKRNAQESVSLAANRSRGRGFKPNANNNMVANRIVENKAKG
RGPGPVTIENRRNNTVQHSDEHQLVHDMKQVSVSDGNQYHQPARHNKGFFPSSNQHRSNA
VPPRMQSHQQQTHSQQQTIQQQQQQQQQQQDNSGNRPKRYSSLRQRPTISETSAQQNYPS
QHAQHGYFPPQAGNSRSVLESQGYPQGHFEQSSPVASATAGPMAGQPVISLPPGGQPASY
APPAFLVPPPQFIPPQTAPPNIINYVPGPNGPTFPPNFQGYQGYSPSVQPQGPPPPQELF
QPQGCTYYSPAQQQQQQQQQAAPIRRPKAAIPILPPPDNQQGGRGRGRSAQPYQHSNQPG
GGAIVQQTEQQEIKNAAESDEKSVSGQFDSAQIEPSSVPDQEYEHAMDHATDVIASMDDT
NESAEGNAETHAKVDALLSAEDNVDDSNSVTELLETTSAEKNAVSRSPTTTLAVAETECE
LGNIESAISESTIVEKAAA
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgtcggatacacgacgacgtcgaaaatccaatcaatcgtgcggttccgatgatctctcg
gactcgtacgaggagctcaacgcgacaaaggagacccagagtagtgaacaaaccgatggg
catcaggattcagaatgtgatatttatgagagtgagtcggatggcgaatcacaggaaggt
ggagagttacgagagagcggggacggtcaggaggaagagaagccacagaagaagttggac
gacgacgaggacaggcgtaatccacaatatattccgaaacggggcacgttttacgagcac
gacgatcgtacgaccgacgaagtgactgacaacaacacagaaacgcaaacgaacacaaaa
gaaactaaggagaagaaggtgtggaaggataaggaagacagatgggaccacgatcggtac
aacgatgaggagcaagctccaaagagaccggaagaattgatagctacgtacggttatgat
atcagaaatgaggaagggccgcctcgcgctagaaggagaagaagatacggtcgtgggcct
aacaagtacacaagaaattgggaagatgaagatgcttacgggaagactactcctggtaga
ggaaatatcaggcgctttcagaaaaacaatgaagactttcctgctctcagtaataataag
aatgcttcgagcaaagtagaagagcctgtgatttcatcggcatggtacagcagcaagaac
aaaacgcagaaaacgcagaacttcccgccgcttcagccccagcaggacaatgcgaagact
aaatctgctaccgttcccaatacacctacaaacgaaagcaaggtaccagacgattcaact
aatacatcttggaaaaaggatgacaagcacattattcaaaatcaaaatacgaatggaaat
agcgggtcgggcgacgcggaaaaatcagtcaatgctaaaccatcaccacgggaaaacaac
aagaggaacgcccaagagtccgtaagcctggccgcgaataggagccgaggaagaggtttc
aagcccaatgctaataacaacatggtcgctaacagaatagttgagaacaaagcaaaggga
cgcggccccggcccagtcactatcgagaatagaaggaacaacactgtgcagcacagtgac
gagcaccaacttgttcatgatatgaagcaagtcagcgtcagcgatggcaatcagtatcat
cagcccgcaagacacaacaaaggctttttcccatcttccaaccaacacagatcaaacgca
gttccacctagaatgcagtcacatcagcaacaaacgcattcgcaacagcagacgatacag
cagcagcaacaacagcagcaacagcaacaagataattctggaaacagacctaaacggtat
tccagcctgcgtcaacgacctaccatttcagaaacttccgcacagcaaaattatccatct
caacacgctcagcatggatattttccacctcaagctggaaactcaagaagcgttttggaa
tctcaaggttacccgcagggtcactttgagcaatcttctccagtcgcttctgccacagca
ggacctatggcagggcaacccgttatttccttgccgcctggtggacagcctgctagttac
gcgcctccagcgttcctagttccacctccgcagttcatacctcctcaaactgctcctcct
aatataatcaattacgtgcccggtccgaacggaccaacgttcccaccaaacttccagggt
tatcaaggatacagtccttcagtacagccccaaggaccgccgccgcctcaagaattgttc
cagccgcagggatgcacttactacagcccggcgcaacagcagcagcagcagcagcaacag
gcggctcctatacgacgaccaaaagcggcgatacccattctcccaccgcctgacaatcaa
cagggcggtagaggaagaggtagaagcgctcagccgtaccagcacagcaatcaacctggt
ggtggtgctatcgtgcaacagactgagcagcaggaaattaagaatgcggcggagagtgac
gagaaatccgtgtcaggacaattcgatagtgcgcaaatcgagccgtcgagcgtgccggat
caggagtacgagcacgccatggatcacgctacggacgtgatcgcgagcatggatgatacg
aacgaaagtgcagagggaaacgccgagacgcacgcgaaggttgacgcgttactgtccgcc
gaggacaacgtggacgacagtaacagtgtgacagaactgttagaaacaacgtctgccgag
aagaatgccgtttcacgtagtcccacgacaacactggccgttgctgaaactgaatgcgaa
ttaggtaatattgaatcagctatttccgaaagtaccatcgtcgagaaggccgcagcctaa

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