Ooceraea biroi (clonal raider ant): 105282997
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Entry
105282997 CDS
T05778
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105282997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105282997
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105282997
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
HECT type E3
105282997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
105282997
NCBI-ProteinID:
XP_019888434
LinkDB
All DBs
Position
14:complement(7335983..7353306)
Genome browser
AA seq
2075 aa
AA seq
DB search
MADQQDQLSSGGSVEKASASADTSKPRGKNSSSGSSNYRKRQNTGAISDTVEEKRRRQAI
SDPQTSQVHSNTAHAHSVDSSREESRVRGERRNHGTGLESYPDTDWRPHHKIHQASYSSS
SSSARVRSVARTNLSELNLTPTDCVASRTRSRTPQNPQALTQGSSSYDLSLATGYSSRKT
STYNLVASSSATSITSHPSTSRGRGGQRMSECLEGFVSAVKALFPISTQTYHQEDSKSHG
GAATCSATSSSTSSQVLGVKSSIRVGNAASNSVESGGGALAHDGAGTSGIASTATTNPPV
SAAASANSAHPHSTHKHLLRSRAKASVEQSKELPSSNKTSGKHHKKDSTTGSCSSSRHRS
SSRVRKPVVESGSGLGTVMSGNDSISATSVSSSVPGSQLVSTTGEEESASTATSATASGG
PSGMSGTTGDSESDDGEVGRLQALLEARGLPPHVFGALGPRMQHLLNRSMGASSAAKAQQ
LLAGLQAVEDEGEQLQAVMNMGEILVMGNEDTLTGFPVKQVVAALINLLGIEHNFAIMTH
ACRALTYMMEALPRSSTVVVDAVPVFLQKLESIECMDVAEQCLTALAMLSRRHSKTILHA
GGVSACLKFVDFFNITAQRAALTITANCCQNLHPDDFHLVVDSLPLLTSRLTNQDKKSVE
CVCQAFSRLVDSFQHDPVMLHKIINAELLQNLQQLLMITPPVNSTNNFITVLRMLSVISN
RCPDLAQLLLQQNIAFTLSYLLTGSLEVKTEDVELVPHTPQEWFEITCLIEELMPPLPTD
GIFSVNSLLERTSNQQETVQWEWRDERQCFHPFSTIDSRIIEMAFQNGEDEICLSSLGRT
YTIDLTVMKQINEDIGMARSIFRRVNANPTEGKSPTCSSSMDVVPPVIETNEWLVSFIRT
LFSVLYEVYSSSAGPAVKCKCLRALLRMVYYASTDLLKDVLKNQVVSSHIAGMLASQDLR
IVIGALQMASILMKRLPQVFGVHFHREGVLHQVRQLADPEVPLGVSPPKCPSGTSLPSPQ
PGPSNTPLSSTAMLSSSSATSPVVSPSSNGNILFGTIASSCQYKPNISASLEPHRTELSG
SVEEPSTPQSAHLRIGDVLKRKRQNKKGRFSRLGGTTTPQQAQQPESLFTGFTPKNNRFL
GNLNPARWGRKSSSSSTSSDKRDSSSSTNLSKPPSNPSLTGGNRDKAKAWVREQAAQFLA
RYQDDAPCSHPALTVLARLTAAIQRLQSNELDEMLSALTELRDIVLESDISPFEMNYSGL
IKALLNYLTTTDAPGNRYDRLRMFWKLFAESTMQQNNDIMDLNPGAFGALVAKLNSCVAQ
LEQFPVKVHDLPAGSGAGRGGTSALKFFNTHQLKCNLQRHPDCNNLKQWKGGTVKIDPLA
LVQAIERYLMVRGYGRIRDADSMVSDDDNSEDDIDDTLAAVVISQGSAKHKLQFLIGDVV
LPFNMTVYQAVRQFGCSGVDHSEAEADSEPPLGHDAVWVQTHTIYYRPVPEEDAATSPKS
GSTSQGSSRKGKGKSTKISSKRKEDSLWLEGTIPPQHCPLAPYLSPTLPSSVTITDASLD
GLCLLRLLHALNRHWGILFPHLKSMSLLSSQDFINNKIAAKASRQLQDPLVIMTGNLPSW
LQQIATVCPFLFPFETRQLLLYATSFDRDRALQRLLDSAPELSGSDSQERVTPRLERRKR
TISRTDILKQAEQVIQDLASSKALLEVQYVNEVGTGLGPTLEFYALVSKELQRADLDLWH
GSSNPTENGYVNPVHGLFPTPIPWNTKVSHLAKLKTKFKFLGKFMAKAIYDSRMLDLPFS
LTFYRWLLGEEHTLTLADLAYVCPDVHRTLSKLQEVVRRKEAMEKDQTLRPHEKAQLIES
LDLDSCPISDLGLVFELPGYENIELRKGGSEISVTIHNLDQYIKLVVYWFLYEGVFRQME
AFREGFESVFPPSQLRLFFPEELEAVFCGHAQTGGQWDVKTLAECCRTDHGYTPDSRAIR
FLFEVMSKYNSEEQRQFIQFVTGSPRLPVGGFKSLTPPLTIVRKTFDPSMKTDDFLPSVM
TCVNYLKLPDYTTLEIMREKLRIAAQEGQHSFHLS
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaacaagatcagttgtcatcaggggggtctgtagagaaggccagcgcttca
gcagacacctctaaacctagggggaaaaactctagtagcggttccagtaattatagaaaa
cgacaaaatactggtgctatctcagatacggtggaagagaaaagacgtagacaagccatt
agcgacccacaaacatctcaagttcatagtaatacagcacacgcacattcagtcgattct
tccagggaggagagcagggtcagaggtgaacgaagaaatcatggaactggcttagaatct
tatccagataccgactggagaccacatcataagattcatcaagccagctatagcagcagt
agtagcagtgcaagggtgcgcagtgttgcaaggacgaatttgtcagagttaaatttaaca
cctaccgattgtgtggcatcgcggactcgttctcgtacaccacagaatccacaagcattg
acacaaggaagtagcagttacgatctgtcattggctactggatacagtagcaggaaaaca
agtacctacaacttggtagcttcatcgagcgcgacgtcaatcactagtcatccatctaca
tcgagaggaagaggaggccagaggatgagcgaatgtctggaaggatttgtgtctgctgtc
aaagcactttttccaatatcaacacaaacctaccatcaagaagactcgaaatctcacgga
ggtgcagcaacctgtagcgcaaccagtagcagcacgagtagtcaagttttgggtgtgaag
tccagcatcagagtgggtaacgcagcaagtaactctgtggagagtggtgggggtgcgttg
gcacatgacggggcaggcacgagtggcatcgcgtcaacggccactactaatccacctgtg
tctgccgccgcttctgccaattctgcacaccctcattctacacacaagcacctgctacgc
tctcgcgcaaaagcttctgttgaacaatccaaggaactgccatcgagtaacaaaacttca
ggaaagcatcacaagaaagactctacaacgggttcctgttcgagttccagacatcgctcc
tcatcacgtgtgaggaagccagtagttgagagtggctccggtttgggcactgttatgtca
ggcaatgactctatcagtgctacttcggtatcgtcctccgttcctggcagccagttagtc
tcaactacaggtgaggaggaatcggcatccaccgctacatccgccacagctagtggaggg
ccgtctgggatgtcgggaacaaccggtgacagtgaaagtgatgatggagaagttggacga
ttacaagctttactggaagctagagggctgccgcctcatgtatttggtgcattaggaccg
cggatgcaacatttacttaacagaagcatgggtgcaagttctgctgccaaggcgcaacaa
ctgctagctggtttgcaagctgtcgaggacgaaggagagcaattgcaagccgtaatgaat
atgggagagattcttgtaatggggaacgaagacactttaaccggtttccccgtcaagcaa
gtggttgcagctttaattaatttattgggaatcgagcataattttgcgataatgactcat
gcgtgtcgtgctcttacatatatgatggaagcattgccgcggtcatctactgttgtggtg
gatgcagtgccggtatttctgcaaaaactcgaatcgatcgaatgtatggacgtagctgaa
cagtgcttgacagcgttggccatgttatcacgcaggcacagcaaaacaattttacatgcg
ggtggagtatcagcctgtttgaaatttgttgatttctttaacattacggcacaacgtgca
gcattaacgattaccgccaactgctgtcagaatcttcatccagatgattttcatttagta
gtggatagtttgccgttattaacgagcagattgacaaatcaagacaagaagagcgtcgag
tgtgtatgtcaagcgttcagtcgattagttgacagttttcaacatgatcccgtgatgcta
cataagatcatcaatgccgaactcttacagaatttgcaacagctgcttatgattacgcca
ccggttaacagcactaataatttcataactgtattgcgaatgctctctgtgatatcaaat
cgctgtcccgatctggcacagttgttactgcagcaaaatatagctttcactttaagttat
cttttaactggatctctggaagtaaaaacagaagatgtggagttggtaccgcacacacca
caggaatggttcgaaattacatgtttaattgaagaactcatgcccccattgccgacagat
gggatattcagtgtaaatagtttactcgaaaggaccagcaatcaacaagagactgtccag
tgggaatggcgcgacgaaagacagtgtttccatccattcagtactatagattctagaatt
attgagatggcgtttcaaaatggcgaggacgaaatatgcctttcatccttaggacgaact
tatactatagatctgactgtgatgaaacaaattaacgaggatataggaatggcgagaagt
atatttcgcagagtaaacgccaatcccactgagggaaagagtcctacttgctcatctagt
atggatgtcgtgcctccggtaatcgaaacaaacgaatggctagtgtcttttattcgaact
ttattctctgtactatatgaggtttatagtagttcagctgggcctgctgtgaaatgcaaa
tgtcttcgagccctccttcgtatggtgtattatgcttcaactgatttacttaaggatgtt
ctaaagaatcaagtggtttcgtcgcacatagctggtatgttagcgtcgcaagatttacgt
atagtcattggggctctccaaatggcgagcatcttaatgaagaggttgccgcaagtgttt
ggagttcattttcatcgtgagggagtgctgcatcaagttcgtcaattagcagatcccgaa
gtacctctcggtgtttcaccacccaagtgcccttctggtacatcattaccaagcccacag
ccaggtccgtctaatacaccactttcttccaccgcaatgttgtcttctagtagtgccacg
tctccggttgtctctccatcatcgaacggcaacatattgttcggcactatcgcgtcgtca
tgccagtataaaccaaatatcagcgcttcgttggaaccacatagaacggagttaagcggt
agcgtagaagaaccaagtacaccacaaagtgctcacctaagaatcggtgacgtgctgaag
aggaaacggcaaaacaaaaagggtcgtttctcaagactgggaggtactactacaccacaa
caagcacagcagccggaatctctgtttaccgggtttacaccgaagaataaccgatttctg
gggaacctcaatccggctagatggggtcggaaatcgtcctcgtccagcaccagcagtgat
aagagagactcaagctcatctacgaatctgtcgaagccacccagcaatccgagtttaacc
ggtggtaaccgggacaaggcaaaggcgtgggtgcgcgaacaagcggcccaatttctagcg
agatatcaggatgacgccccctgctcacatccagcactaaccgttctcgctcgactaacc
gctgcaatacagcggctacaatcaaacgaactggacgaaatgttgtcagcactaacggaa
ttacgggacatagtcctcgagagcgacatatcgccctttgaaatgaattacagtggtctt
atcaaggctctgctgaactacctcactactacagatgcacccggcaatcgttacgatcgc
ctccgtatgttttggaaattgtttgcagagtccactatgcaacagaacaacgacatcatg
gatcttaatcctggagcattcggagctctagtagcgaaattgaacagctgcgttgcacag
ctggaacaattcccggtgaaggttcacgatttacctgcaggttctggcgctggccgtggc
ggtaccagcgccctcaagttcttcaacacgcatcaacttaagtgtaatcttcaacggcac
ccagactgtaataacttgaaacaatggaagggcggcactgtaaaaatagatccacttgca
ctagtacaagcaatcgaacgttacttgatggtacgcggatatggcagaatacgagacgcc
gattcaatggtcagcgatgatgacaacagcgaagatgacattgacgataccttggcggca
gtcgtgataagtcaaggatcagcgaaacacaagcttcagtttttgattggcgatgtagtt
ctaccttttaacatgaccgtctatcaagctgtcagacagtttggatgttcaggagtggat
cattcggaagcggaggccgatagcgaaccaccgcttggacacgatgctgtatgggtgcaa
actcatacgatatattacagacctgtaccagaagaggatgctgccacttctccaaaatca
gggtcgacctcacagggtagtagtagaaaaggcaagggaaaaagtacaaagattagttcg
aaaagaaaagaggacagtctctggctggaaggtacgattccacctcaacactgtcccctt
gcgccatacctatctcctacgttaccgtcatcggtaaccattacggacgcttctctcgac
gggttgtgcttgttgcggctcttacatgctctaaatcgccattggggcatactgtttcct
catctgaagagcatgagtttattatcatctcaagactttatcaataataaaatcgctgcg
aaagctagtagacagctgcaagatccactggtgatcatgactggaaatttaccatcgtgg
ttacaacagatcgcgactgtctgcccgttcctctttccatttgaaacgaggcaactgttg
ttatacgcaacatcgtttgaccgagatagagcactgcaacgtcttttggactctgcgccg
gaactctcgggttcggatagtcaggagcgtgtcacgccacgtttagaacgacgaaagaga
actatttcaagaacagacattcttaagcaagctgaacaagtaattcaagacttggcctct
agcaaggctttgcttgaagtgcaatatgtcaatgaggtcggtactggcctcggcccaaca
ctggaattttacgctctagtctcgaaggaactgcaacgcgctgatctcgatctgtggcac
ggcagttctaatcctaccgaaaatggatacgttaatcctgtacacgggcttttcccgacg
ccaattccatggaacactaaagtatctcatttagcaaaattgaaaaccaagttcaaattc
cttgggaagttcatggcgaaagcaatatatgactctagaatgttggacttgccatttagt
ttaactttctaccgctggttactgggagaggaacatacgcttacgttagcggacttggcg
tacgtgtgccccgacgtgcaccgcactctcagcaagttgcaggaagttgtcagacggaag
gaagctatggagaaagatcagacgttgcggccgcacgagaaagcacaattaatcgaatcg
cttgatttggacagttgtccgatctccgatctcggtctcgtattcgaattgccgggttac
gagaacattgagttgagaaaaggcggcagtgagatatccgttactattcataatctcgat
caatatattaagttagtcgtatactggttcttgtacgagggagtgttcagacaaatggag
gcttttcgggaaggtttcgagtcggtattccctccctcgcaattgagactattcttcccg
gaggagctggaggcggtattctgcggacacgcacaaaccggcggacaatgggacgtgaaa
actctcgccgaatgttgcaggaccgatcatggctacacacccgactcgcgcgccattcgt
ttcttatttgaagtcatgtcgaagtataacagcgaggaacagcgacaattcattcagttc
gttaccggctcaccgcgcttacccgttggaggtttcaagagcttaacgcctccgttaaca
atagtgcgcaagaccttcgatccatctatgaaaacggatgattttctaccatcagtaatg
acttgcgtcaactacctaaaactgcctgattataccactttggagataatgcgggaaaag
ctgcggatagctgcacaagagggtcaacactctttccatctctcctag
DBGET
integrated database retrieval system
