Ooceraea biroi (clonal raider ant): 105283105
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Entry
105283105 CDS
T05778
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04120
Ubiquitin mediated proteolysis
obo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105283105
04120 Ubiquitin mediated proteolysis
105283105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105283105
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105283105
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105283105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
VPS13_N
zf-ANAPC11
zf-RING_Vps41
zf-RING_5
zf-RING-like
zf-HC5HC2H
Endonuclease_7
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
105283105
NCBI-ProteinID:
XP_011343874
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Position
9:11477337..11481567
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AA seq
613 aa
AA seq
DB search
MREAGIMLISTVLTCAVIGNAYYQRKQFYPTVVHITKSNPSMTVIYAQGFILAFMINAFL
RKIFFGTLRAAELEHLVEKVWYAVTETCLAFTVFRDDFSPKFIALFTLLLFLKSFHWLAE
DRVDYMERSPVITWLFHLRVGTLLSLLFAINLTMIHYAYNTTATKGPSVQLVFGFEYAIL
LTVVFNITVKYILHTIDLQSENPWDNKPVFLLYTELIIGLLKVILYVAFVTLMIKLFTLP
LFALRPMYYTMRDFKKAFHDIVMSRRAIRNMNTLYPDATTEELAAADNVCIICREEMVAA
SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNILRPAPSNTAPRQHNPPQPGQQVPQPAQA
PGVNPIGAPFHFPVFWAGLPAPGMPHQQQQQPQQQQQQPPQQQQQQQSQSNVGNSPPPQN
IPPTGNIPLFPPLFPTIVPLPPIPVPPPNLTELSEEELRAMEGNLRQAVQARIQTLQRIQ
LLLDAANAMMNQYQTAAATANIPVHSTNDINSTPDVSATTQPSTSNTTDASAGVTGEAPP
QAETKTDSAVLSRRTFEEDFPTPSTSKEDTEGTPTESNRTEDLSNGYETKSSSEQEMLRR
RRLQKFSPQPATE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggccgggatcatgctgataagcaccgtgctaacgtgtgccgttattggcaac
gcttattatcaaagaaaacaattctacccgaccgttgtccacataaccaaatccaacccg
agtatgaccgtaatctacgcgcaaggattcatccttgcgttcatgataaacgccttcctg
cggaagatcttcttcggtaccttgcgcgctgccgagctcgaacacttggtggagaaagtg
tggtacgcagtgacggagacgtgtctggcgtttacagtgttcagggatgacttcagcccc
aagttcatagcgttatttactctcctcttgttcttaaaatcatttcactggctcgctgag
gaccgcgttgattatatggagagaagtccagtaataacatggttgttccacctcagagtc
ggtaccttactgagtcttttattcgccatcaatttaacaatgatccattacgcgtacaac
acaacggccactaagggcccctccgtacaacttgtgtttggctttgaatacgcgattttg
ctaaccgttgtcttcaatatcactgtaaaatacatactgcacactatcgacctacaaagt
gaaaatccatgggataacaagccagtttttctgttgtacacagaattgattattggtttg
ttaaaggttattctctatgtcgccttcgtgactttaatgattaagttatttacattgccc
ctgttcgcgttacgtcccatgtattatacgatgcgagacttcaagaaagcatttcacgat
atcgtaatgtcgcggcgagccatcaggaacatgaacaccctctatccggacgcgacgact
gaggaattagctgctgctgataatgtctgcattatatgccgggaggagatggttgcggca
agcaagaaattgccatgtaatcacattttccacactgcttgcttgcgttcctggtttcaa
cgtcaacaaacgtgtccaacctgccgcttgaacattctgaggcccgcaccgagcaacacg
gcacccagacagcacaatcctccccagccggggcaacaggtacctcagcctgcgcaagcg
cctggtgtcaatcctataggagcaccgttccatttcccggtattctgggctggcttacca
gcgccgggcatgccgcaccaacaacagcagcaaccgcagcaacaacagcagcaaccaccg
cagcagcagcagcagcagcagtctcagagtaacgttggaaatagcccgccgcctcaaaat
atcccacctactggaaacataccgcttttcccaccgctgttccctacaatagtaccgttg
ccacctattcccgtgccgccaccgaatttgaccgaactgagcgaagaggagcttagagca
atggaaggaaacttgcggcaggctgtccaagccaggatacaaaccctgcaaagaattcag
cttctattagacgcagctaacgcgatgatgaatcagtatcaaacagcggctgcaactgct
aacattcccgtgcacagtacgaacgatatcaatagtacgccagacgtgtcggcgacgacg
caaccaagcacaagcaatacaacagacgcaagcgccggggttaccggcgaagctcctcct
caggctgaaacgaaaacagacagcgctgtcctatctcggagaacatttgaggaagatttt
cctactccgagtacatcgaaggaagacacggaaggaacacctaccgaatcgaaccgcacc
gaagatttatccaacggatacgaaacgaaatcctccagcgaacaggaaatgctacgcaga
cgtaggctacagaaattttcacctcagccagcgacagaataa
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