Ooceraea biroi (clonal raider ant): 105283278
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Entry
105283278 CDS
T05778
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obo03000
]
105283278
03036 Chromosome and associated proteins [BR:
obo03036
]
105283278
Transcription factors [BR:
obo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105283278
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105283278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DNMT3_ADD_GATA1-like
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
105283278
NCBI-ProteinID:
XP_011344206
LinkDB
All DBs
Position
14:6849341..6863134
Genome browser
AA seq
2415 aa
AA seq
DB search
MSSRKEIKTTEQELAYRQKHCHDIRVLKERGIKCSSCGNELNVSSNRIFSNPWIGILQCE
QCRKHFKEVSTRFEKNNTEKYCYICGNSNKLYVCGDEDCTSAFCKKCIKRNVSLSLLAAE
KDDWKCFTCNPKPIWQLRAVCAVVMSDLSKGHNRRDTHTREKHTLPFDKQRFRKTREIQK
ALSAFCDEDDDDGNYSDNSSFLTARSTISMLGACNTNRDVKRQDTNSASRESILEISLVD
STSSESSSSSRERRGEQRKSREREKARSVDEQDSSSGVAQRVSKLAMNGKCKPRRNVISS
DDSDDESPDLSRTVRQKHTVKHKKSEEVRSKTSNRNYTNSSDSESDCVNETSNTSKSLSK
YTAHQKKGKIAGGSCSTKSAKDKQKKMNHDSSNESEDDLEHKKQTKKKSSTNNTLHSKDE
QKQENREKLLKRTFCETREDDSDASSGKEFQKIKIQKLHSDKYSKRQLFNLEQDRSKLTN
LETEKGERSIDEPTTSGFNEAKEILKGCKKICLSFLMYIDSIEQLYGKKAEEEVILKSAG
KVNKLKTMLEKKERDLTTFCQSCSKTRENRVATRNSRKIISDDDDDDEQVSEITDTREER
PMSENGRNSGNEREGKDVSECDSEEIFSADEMRTPQKMQSKKSISRVEDDPDDITTEIGK
DRMPIDKSKTNDNVDLQDEKSAAVSSISKEKNIRTENTKSNEKQLLRECDSNSKRTELAE
KDTDSKDEKQAKLNANNHDNESTFEDSSAKNGNQETTLRGDNQDDSISRTVAIDVSLDLF
DSSFDLHDEDENEMEAEKMDTETSCEKTKFLSKTTSLDTRETSLQDKIPDEKNNASALVP
RGEEEDLSNQVNTVSACTSKETIHDGSKEIDTSKEMSLGDVNKSVDEAEMLAKKALLESD
TDSDTDTVINKNITKQTEDLITDTSPRKDETEGCSDVSSTTSTVKLSTFAKSKIDTTIEV
TDASEESQLDKTAGKESEISQTSDETNAKKEQAAKKALLESTSEDSSSIILSSLESEEIE
EKSRLDVARENAEAKKALLASSNSESSGLVSETEINISKRMTKAKDYEADSDEDSLISRV
KKRRLKLSKNYHYKKDKKLRMFCEVCLERLSDNVLKRYSKTLKESREYLEQKALKSLINL
DRLEKRYKKNKKIDSDTSTDDDKAAKVLKSLNKRKGNQTKEESLMDHLKKIENDEVSAIV
RTDSSSDEFIHQVNDINATPVSNEALMSEANKVAKDNLLKSSDSDAGGDVLNSEDDISND
DKKLEDKKKKHQKKSDEKTLKQDDGKKEKTNKSNWRQNKLLTMKFSDTDSDNEKKKWDKK
QEKMAKGSERNSSDTDDEKARLTSKKKKIKRRILDSDSDVKLTDCSSDSNNISETSKDEE
NLSDSDARKEKQKRKRRKRGESNSSGTDSSFQEKKSKPKRKRIKKMASDSDSSDGDMKNS
QGSTPGKSGRKNIRKVLKDKQVAEDTKLAAKEEEERLKRIAERQALYNEVYEMRLAGEEK
VDKLVLDFNTETKEELISVHKELVKCLKPHQAQGIKFMWDACFESIERVKTTSGSGCIIA
HCMGLGKTLQVVALTHALLTHEATGVKTVLIVCPLSTVLNWLNEYNTWLKNLDDINVYEL
TKFKKNFERKYQLQNWQQTGGVMILGYDMFRNLTGPNKNIRKAMKEVILECLVEPGADLV
VCDEGHLLKNEETALSKCMRRVKTMRRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTRKEF
LNRFVNPITNGQFDDSTAYDVKLMKKRAHVLHKMLEGSVQRFDYSVLTPFLPPKQEFVIF
VRLTDIQMKMYQYYLDNLARRHHSGAGGTLFADFQALQRIWTHPVVLRLNAEKVEKANEK
KGLSDSEGSLKDFIDDGSLSSSSSSDSHSDSDVQALDDQDNVPKRRTRNNPGEEEPEEET
KEEENKEAEWWSQFVQPEHFEDIRVSAKLTLLFGILKECEQIGDKVLVFSQSLYSLTLIE
EFLARIDDETQKNASLDTLENHTGSWSLGLDYFRLDGQTSPENRSMWCKIFNKPNNIRAR
LFLISTRAGGLGINLTAANRVIIFDASWNPSHDVQSIFRIYRFGQKKPCYVYRFLAAGTM
EEKIYNRQVTKLSLSCRVVDEQQIERHYSNHNLNELYIFEPYDNVDKPIEQRFNIPKDRL
LAEIFQKYQNIIENYHEHDSLLENKAEEELDEEERKQAWLEYEEEKKGRPMINPTINSAY
QNNILLQQYNMMMNSGQSSMVSPGMSLQMEYENLQQLIRKDYPNATPEQQKMMTNRAIME
MYNYWEKQATLGNTFPPARNLTTVTQTNFQQRPMPMSHTMTNSNVQQQQTSQLSQLLASG
QTGNYVNKSVQPNVAQRDMLPNMYRNAPSTNSAGKADDDIIEVIPTTSNAGTLKVGQVAM
QSTMQSTNKSNNQEE
NT seq
7248 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaggaaagaaatcaagacgactgagcaggagcttgcttatcgtcaaaagcac
tgtcatgacattagagttctcaaggagagaggtataaaatgttcttcatgtggcaatgaa
ttaaatgtctcgtcaaatcgaatcttttctaatccgtggataggaatattgcaatgtgag
caatgtcgaaaacactttaaggaagtaagtacgagatttgaaaagaataacactgagaaa
tattgttatatatgtggtaacagcaataaactgtatgtatgtggtgatgaagattgcacc
tcggcattttgcaagaaatgtataaagagaaatgtgagtttatcattgttagctgcagaa
aaggacgattggaaatgcttcacatgcaatcctaagcctatttggcaattgagagctgtg
tgcgcagttgtgatgagtgatctttcaaaagggcataacaggagagacacccacacacgt
gaaaaacatactttgccatttgacaaacaacgattcagaaaaactagagaaatacaaaag
gccttgagcgcgttttgtgacgaagacgatgatgacggtaattattctgacaacagctca
tttcttactgcaagatctacaatatctatgctgggagcgtgtaacacaaatcgtgacgta
aagagacaagatacaaactcggcttcgcgagaaagtatattggaaataagcttggtagat
tctacgtctagcgagagctcatctagctcgcgcgaacgacgaggcgagcaaagaaaaagc
agagagcgcgagaaagcgagatcggtggatgaacaagattccagcagcggcgtcgcacag
agagtttccaaattagctatgaatggaaaatgtaaaccaaggagaaatgtaatttcttcc
gatgattcggatgacgagtcccccgatctgagtagaacggtcagacagaagcacacggtc
aaacataagaagtccgaagaagtgagaagtaaaacgagcaatcgtaattacacgaactct
tccgacagcgagagcgattgtgtaaacgaaacgtcgaatacatccaagagtctttcaaag
tatacggcgcaccagaagaagggaaagatcgctggtggttcttgtagcacgaagtcggct
aaggacaaacagaagaagatgaatcacgattcatctaacgaatctgaagatgatctcgag
cacaagaagcaaactaaaaagaagagttctacgaataatacgctgcatagtaaggatgaa
caaaagcaagagaatcgtgaaaaattgctgaagagaaccttttgcgagactcgagaggat
gactcagacgccagctctggtaaggaatttcaaaagataaaaattcaaaagttgcatagc
gataaatattctaaaaggcaattgttcaatttggaacaagatcgtagcaagttaactaac
ttggagaccgaaaaaggtgagaggagtatcgatgagccgacgacctcgggtttcaatgaa
gcaaaagaaattttgaaaggatgtaaaaagatatgtctaagttttctaatgtacatagac
tctatagagcaactctatggaaagaaggctgaagaagaagtgatactgaaatctgcgggg
aaggttaataaattgaagacgatgctggagaagaaggaaagggatttaacgactttctgt
caatcgtgctccaagactagggaaaatcgcgttgctacgagaaattcgcgcaagataatt
agcgatgacgacgacgatgatgagcaagtttcagaaataactgatacacgcgaagaacgc
ccaatgagtgagaacggacgtaattctgggaacgagcgagagggcaaggacgtgtccgag
tgtgacagtgaagaaatattttcagcagacgagatgagaacacctcagaagatgcaaagc
aagaagagtatatcgagggtagaagatgatcccgatgatatcactactgaaattggcaaa
gacagaatgccgatagataaatcgaaaactaatgataatgtggatttacaagatgaaaaa
tcagctgcagtatcatctatctcaaaagaaaaaaatatcagaacggaaaacacaaaatca
aatgaaaagcaactgcttagagaatgtgatagcaacagcaaaaggacagaattggcagaa
aaagatactgattcgaaagatgagaaacaggccaaattaaatgctaacaatcatgataat
gaaagcacctttgaagattcctctgcaaaaaatggtaatcaggaaacgacattacggggt
gacaaccaagatgattctataagcagaacggttgcaattgacgtgtcattagatttgttt
gattcatctttcgacctccacgacgaagatgaaaatgagatggaagcagaaaaaatggat
acagaaacgagctgtgagaaaacaaagtttttatctaaaactacgtctttagatactcgt
gaaacctcgttgcaggataaaattccagatgaaaaaaataatgcgtctgctttggttcct
agaggcgaagaagaggatttatcgaatcaggtaaacacggtgtctgcatgtacaagcaag
gaaacaattcacgacggttcaaaagaaattgatacatctaaagaaatgagtctcggcgat
gtcaacaaatctgtcgatgaggctgagatgttagcgaagaaagctttattagaatcggac
acggattctgacacggatacggtcattaataaaaacattacaaaacaaacggaagattta
attacagataccagtccgaggaaagatgaaacagaaggttgttctgacgtcagtagcact
accagcacagtaaaattatcaacatttgcaaaatcaaaaattgacactacaattgaagtt
accgatgcaagtgaagaaagccaattggataaaacggctggcaaagagagtgaaatttct
cagacttcagatgagacaaatgccaagaaagaacaagctgcgaagaaagctcttttggaa
tcaacttcagaagactcgtcgtcgataattttatcgtcgctagaatcggaagaaatcgag
gagaagagtagattggatgttgccagagaaaatgccgaagcaaagaaggcacttttagca
tcttcgaatagcgaaagttccgggctcgtgtccgaaaccgaaataaatatctcaaagaga
atgacaaaagcgaaagattacgaggccgacagtgacgaagattcattgatctccagagtg
aaaaagagaagactgaaacttagcaaaaattatcactacaaaaaagacaagaaattgaga
atgttctgcgaagtgtgcttagaaagattaagcgataatgtccttaagcgttattcgaaa
acgttaaaagagtcaagagaatatctggaacaaaaggcactaaaaagccttattaatctg
gatagacttgaaaaacgatacaagaaaaataaaaagatagattccgatacgtcaacggat
gatgacaaagctgcaaaggttttaaaaagcttaaataaacgaaaagggaaccaaaccaaa
gaagaatcgttaatggatcacttaaaaaaaatcgagaatgatgaggtttcggcaatcgta
cgaacagattctagctccgacgaattcattcatcaagtaaacgacataaatgctacgcct
gtgtctaacgaagctttaatgtcagaggcaaataaggttgcgaaagacaatctattaaaa
tcctctgattcagatgctgggggagatgtactaaacagtgaggatgatataagtaatgat
gataaaaagctagaagataagaaaaagaagcatcagaagaaatccgatgagaaaacttta
aagcaagatgatggcaagaaagagaaaactaataaaagtaattggaggcaaaataagtta
ttaacgatgaaattttccgatactgattctgataacgaaaagaaaaaatgggataaaaaa
caagagaaaatggcaaaaggatccgaaagaaatagcagcgacaccgacgatgaaaaagca
cgtctaacgtccaagaagaaaaagatcaagcggagaattttagattctgattcagacgtc
aaattgactgactgcagttcagattctaataacatttcggaaacttcaaaggatgaagaa
aatttaagcgattcagacgcgaggaaagaaaagcaaaaacgaaagagacgcaagcgcggg
gagagtaattcatcaggcacggattcctcgtttcaagaaaaaaaatcaaaaccaaaacgc
aagcggatcaagaagatggcatcggacagcgacagtagcgacggggatatgaaaaattca
caaggatctacacctggtaaaagtgggcggaaaaatattcgcaaagttctgaaggacaaa
caagtagcggaggatacgaagctagccgctaaggaagaggaagagaggcttaaacgtatc
gctgaacgtcaggctttgtacaatgaagtatacgagatgagacttgctggcgaggagaaa
gtggataagctcgttttagattttaatacggagacgaaagaggagcttattagcgtacat
aaggaattagtaaaatgcttaaagccgcatcaggcgcagggcatcaaatttatgtgggat
gcctgtttcgagtctatagaaagagtgaaaactacatccggctccggatgtataatcgca
cattgcatgggcctgggcaagacgctacaagtagtcgcgctgacgcacgcgcttctgact
cacgaggcgacaggtgttaagaccgtcctgatagtttgtcccttgagcacagtgctcaac
tggttaaatgagtacaatacgtggctgaagaatttggatgatatcaatgtgtacgagctg
acaaaatttaaaaagaacttcgagaggaagtaccagctacagaattggcagcaaaccggc
ggtgtaatgatcctcggctacgacatgttccgcaatcttacgggaccaaacaaaaatatt
cggaaggctatgaaagaggtgatactggaatgtctggttgaaccgggtgctgatctcgtt
gtatgcgatgagggtcatttattaaagaacgaggagactgcactgagtaaatgcatgaga
agagtgaagactatgagacgtatagtacttacgggaacgcctctacaaaataacttaata
gaatatcactgcatggtacagttcgtgaaacctaacttattaggtacgaggaaagaattc
ttaaacagatttgtcaatccgataacgaacggtcaatttgatgattctaccgcttatgat
gttaaattaatgaaaaagcgtgcgcatgtgttgcacaaaatgttagagggtagcgtgcaa
aggtttgactactctgtccttacaccgttcctaccgcctaaacaggaattcgtgatcttc
gtcagattgacagacatacagatgaagatgtatcaatattacttggataatttagcaaga
cgtcatcattctggtgcagggggaaccctttttgcagattttcaggcattgcaaagaatc
tggacgcaccctgtagttttgcgtttgaatgcagaaaaagttgagaaagcaaatgagaaa
aaaggactttctgactcggaaggatcattaaaagattttattgatgatggcagtttatca
agcagtagtagcagcgactcgcacagtgacagcgatgttcaagctctcgatgatcaagac
aatgttcccaaacgtaggacaaggaataatcctggtgaggaggaaccagaagaggaaact
aaggaagaagagaataaagaagcagaatggtggtcgcaattcgtacaacccgaacacttc
gaggacataagggtgtctgctaaattaacacttctctttggaattctaaaggaatgcgag
cagattggcgataaagtgctcgtgttctcgcagtctttgtattccctcactttgatcgag
gaatttctcgcgagaatagacgacgagacgcagaaaaacgcatctttggatacactggaa
aatcatactggaagctggtccctgggcctcgattatttccggttggacggtcagacgtca
cccgagaatagaagcatgtggtgtaaaatattcaacaagcctaacaatataagggcgaga
ttgttccttatatccacgcgcgccggaggattggggataaacctgaccgcggcgaacagg
gtgatcatattcgatgccagttggaatccctctcacgacgtgcaaagcatatttcggata
tacaggttcgggcaaaagaagccgtgctacgtataccgatttctcgcagcgggcacgatg
gaggagaagatttacaatcgccaggtcacgaagctctcgctttcctgccgagttgtcgac
gagcagcagattgaacggcactacagcaatcacaacctaaacgagctatacatatttgag
ccgtacgacaacgtggacaagcctatcgagcagagattcaatatccccaaagatcgtcta
ctggcagagatatttcagaagtatcagaacatcatagaaaattatcacgaacacgattct
ctcttggagaataaggctgaagaggaactggacgaggaggagcgtaagcaagcctggtta
gagtatgaggaagagaagaagggaagaccaatgataaatccgacaataaattcagcttat
cagaataacatactgttgcagcagtacaatatgatgatgaattctggacagtccagcatg
gtatctccaggaatgtctctgcaaatggaatatgaaaatttgcaacagcttatccgcaaa
gattatcctaatgctacgccggaacaacagaaaatgatgacaaatcgagccataatggaa
atgtacaattactgggagaagcaagctacattaggcaatacattcccacctgcaaggaat
ctgacaacagtgacacagacgaacttccaacaaaggccaatgccgatgtcacataccatg
accaacagcaacgtacaacaacagcaaacctcgcagttgagccaattgcttgcatcgggg
caaacagggaattacgtgaacaagtctgtacagccgaacgtggcacaaagagatatgcta
ccaaacatgtatcgaaatgctccatcgaccaacagcgccgggaaggccgacgacgacata
atcgaggtgatacctaccaccagtaacgcgggtacgctgaaagtagggcaagtagcgatg
caatcgaccatgcaatcgactaataagagcaacaaccaggaggagtag
DBGET
integrated database retrieval system
