Ooceraea biroi (clonal raider ant): 105283287
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Entry
105283287 CDS
T05778
Name
(RefSeq) ATP-dependent RNA helicase bel
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105283287
03041 Spliceosome [BR:
obo03041
]
105283287
03036 Chromosome and associated proteins [BR:
obo03036
]
105283287
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105283287
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105283287
mRNA cycle factors
Common to processing body (P body) and stress granule
105283287
Spliceosome [BR:
obo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105283287
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105283287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
105283287
NCBI-ProteinID:
XP_011344217
LinkDB
All DBs
Position
14:6831285..6840863
Genome browser
AA seq
707 aa
AA seq
DB search
MSNAPNQNGSGLEQQLAGLDLQGSRQPSGGRYVPPHLRHKAASNPPLDLNYSSNSRPPFG
DRDRGGDRDRDHERDRDRGRGGYRDSRSPRDIDFGNFGSFGGRNRRNQENGRDFRYLNSE
RDRPISGNDRWQEPSRNDRWQDNRNDRMGGGGRWDDRGGRGGGRGEVDWTIPTARDERLE
MELFGTGNTGINFSKYEDIPVEATGENIPPHITSFDEVKLTEIIKNSITLAGYDKPTPVQ
KYAIPIIIGRRDVMACAQTGSGKTAAFLVPILNQIYESGPRPPPPQANSSGRRKQYPLGL
VLAPTRELATQIYDEARKFAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDM
LGRGKIGLHNCRYLVLDEADRMLDMGFEPQIRRIVQEDNMPPTGERQTLMFSATFPKEIQ
MLARDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQASNFSDPTAESLTL
VFVETKKGADMLEEYLATMGYPVTSIHGDRTQREREEALRRFRAGKAPILVATAVAARGL
DIPHVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNHKNHNLVRDLVSLLIEANQ
ELPPWLDDMYTEARYSGGASRRPGGGGGGGGGGGGGGGGGTKGRFTGGGFGARDYRQQPS
SGSRNNGPSRPGGYGGGYSSYGGNYNNSSYNNSSNNGNSGGPDWWDK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcacccaaccagaatggatcaggtctagagcagcagttagctggtctggac
ttgcagggctcccgccaaccaagtgggggtcgatacgtaccaccgcatcttcgtcataaa
gctgcaagtaatccaccgttggatttaaattactcttctaactcaagaccaccgtttggt
gaccgagatagaggaggagatcgcgatcgtgaccatgaaagggatcgggataggggtagg
ggtggctatcgcgattcgcgaagtcctcgcgacatcgatttcgggaacttcgggagtttc
ggcgggcgcaacaggcgcaatcaggaaaatggcagagattttagatatctcaactctgag
cgcgaccgaccaattagcggcaacgatcgttggcaggagcctagcagaaatgatcgttgg
caagacaacagaaatgacagaatgggaggcggtggaaggtgggacgacagaggcggccga
ggtggtggaaggggcgaagtcgactggacgatccctaccgcccgggatgagcgactggag
atggagctgttcggcactggcaacaccggaatcaatttcagcaaatacgaggatatcccg
gtcgaggctaccggtgagaacataccgccacacatcacatctttcgacgaggttaagctg
acagagataataaagaacagcatcaccttagcgggatatgacaagcctacaccagtgcag
aagtacgcgataccgatcatcattgggcgccgtgatgtaatggcctgtgctcaaactgga
tccggtaaaacagcggccttcctagtgccaatattaaatcagatttacgagagtggaccg
cgaccgccaccaccgcaagcaaactcctccggtaggcgtaagcagtatccgctcgggctg
gtactggctccgacgagggagctcgctacgcagatatacgacgaggcgcggaagttcgcg
taccgctcgcgtatgcgtccggccgtcgtgtacggcggctccaacatagtggatcagatg
cgcgagttggatcgcggctgccacttacttgtcgcgacgcctggtcgtttggtcgacatg
ctgggacgcggcaaaatcggcttgcacaattgccgatatctcgtcctggatgaggcagat
cgtatgttggacatgggtttcgagccgcaaataaggcgcatcgtccaagaggacaatatg
ccaccgaccggagagagacagactctcatgttctccgctactttcccgaaagagattcaa
atgttggctagagatttccttagcaattacatcttcctggcagtcggtcgcgtaggatca
acctccgagaacataacgcagaagatagtatgggtggaggagcatgacaagcgttcatac
ttgctcgacttgttgcaagccagcaatttctcagatcccactgcagaatcgctaacttta
gtattcgtggagacgaaaaaaggcgccgatatgctcgaggagtacttggccacgatggga
tacccggtcactagtatccacggcgacaggactcaacgcgaacgtgaggaagccctgcgt
cgcttccgcgcggggaaagcaccgattttggttgcgaccgcggtggcggcacgtggtctc
gacataccacacgttaaacatgtcatcaatttcgacctgcccggcgacgttgaagagtac
gttcatcgtatcggccgtaccggtcgcatgggcaatttaggtttggccacgtcgttcttc
aatcacaagaatcacaatctggtgcgcgacctggtgtccttgctgatcgaggctaatcaa
gaacttcctccctggttggatgacatgtacacggaagcgagatactccggaggcgcatcc
cgacgacccggcggtggcggcggcggcggcggcggcggtggtggcggcggcggcggcggt
accaagggtcgcttcaccggcggcggtttcggcgcgagagattatcgtcaacaaccgagt
tctggatctcgtaacaacggtccctccagaccaggtggttacggaggcggttactcaagt
tacggaggtaactataataattcgtcgtacaataattcctccaacaacggcaacagtggt
ggccctgattggtgggacaagtaa
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