Ooceraea biroi (clonal raider ant): 105283491
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Entry
105283491 CDS
T05778
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obo03036
]
105283491
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105283491
microRNA pathway
RISC loading complex
105283491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
105283491
NCBI-ProteinID:
XP_011344594
LinkDB
All DBs
Position
1:complement(22824964..22836235)
Genome browser
AA seq
1975 aa
AA seq
DB search
MAFPLNDQVYTKSFTPREYQVELLYAAKERNIIVCLGKNSEQTFLAIKLIQEFATNNRRL
ITEGGKRAMYILNDEDKCVIIGTYIKQLTDLKVLACDSDILKEFVDSVESSHVLVGTPKV
YAQLMTESKLLPCHINLVIVDECHKSIEDSNLKFILRTFLLCDNVPRIIGLAVPVFNLTQ
EPGRLGLEIEKVEAAFQCGVETANDILSIIRYSPKPREYVVEYAKGEKGNLYDTLESCVL
HAIEFLRDHRYDPMEIYTEEFYEDIQKIPDPIQKPFEMLQDFLHILETLGPWCADRAALA
LLILTEKLKIKTPYERHYLLLNMMTTVFIKIRALCDNEFQHLSEKEKIYQYSTPKVHRLL
QILKTYTPFYTKEINTPEKKINADVDVKNCVTKSDRDASLSRIEEKPAAHSKKFRTNWKF
NDDNYKRTSKSQRHPCNTMDPDLLCGVIFVDKGFTAKVVFYLLNEISKHDEDLHFLSPLY
TIERNTDDIGYARDLEMEYRKQEEVLKRFRIHECNLLISTSILEEGIDIPKCNFVMRYDF
PRNYQSYVQCKSRARAIDALHVLLVPQETSKELIWQLAQYQYIEKTLLLKCSNKELTEEE
ENEADMYTAMIPHYKPLDGADAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSINTVKI
NDTGMYTCSLRLPINSPLKYVVTSYPMPNRAMARRMAALQMCIDLHQENEIDDNLLPIGK
ENFKAKPEDAEVPALPDESRVDFSEARPGTTKRRQYYYKKTAEALMDCRPIVGTPSYLYH
INMVLSCPLPEEQNTRGRRIYPPEESAIGFGILTLKEIPKLCPFPIYTRSGEVHVQLKLS
KESVILNEVQLEKIDTFLNYTFTNVLRLQKYLMLFDPNASENSYIIVPVKISDKGSDVSV
DWDFLECIYQNRNAVPTKVPEEERKTFKFDSSKYHDAVIMPWYRSQDQPQYFYVAEICTN
LNPKSSFPGHDYSTFEEYYLKKYGIQIQNLEQSLLDVDHTSARLNFLTPRYVNRKGVALP
TSSEETKRAKRENLEQKQILVAELCAIHPFPASLWRQAVCLPCILYRINALLLANQIRCQ
VAQMINLGQENLNSDFEWPALDFGWSLAEVLKRSKETEKAKQTKSENVQCNASSNNVISN
KCQNILDQENNKEKASFNETDKPIELESDGTDKTDEANEEIDQKSNELEIGTWSNDMAWS
NDIAIDSINYDAENLKSFPLNVTVLPQDFGWNDIRYGSPTCESDFDGYESDDIYSDGFAD
TSDESEDESRGLKISYMGENVAEAVEDEKQICKQEINKKILDLLETEKNYDNNFWMYAEK
DEEVLLMKHKEAHYEFTKKKERDIMNDGTFISCDSEIMMKRRNSLSCQIDKEQPNCKHEE
YTKTIVKKFIDEVLNKEPSKSTQSVKKEISMQNKISYLDNEFFSFDYQPELKGHPGPSPS
LILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLN
LYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSTLWNQADIPTLQA
VNPSEITQLVKETEEKLVIMKSELDKNESRLSNTLDNLRCFIPYNLITQHSIPDKSIADC
VEALIGAYLIACGPRGALLFMTWLGIHVLPAKEICVVSENEPEDRIPGSTPYVKEFDESD
ETTWTQMYYGKLEEPQNPLLRYIPDPENELHMMLDGYEELEKNIGYKFRDSSYLLQAFTH
ASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALVNNTIFASLA
VRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEDECEEAEDVEVPKALGD
VFESLAGAIYLDSGMSLDAVWSVYYAIMKSEIEQFSTNVPKSPIRELLELEPETAKFGRP
EKLADGRRVRVTVDVFGKGSFKGIGRNYRIAKCTAAKCALKKLKSKMQNYSKPKL
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggcatttccactaaacgatcaggtctatacaaagtcctttactcccagggagtatcaa
gtggagcttctttatgcagcaaaggaaagaaacataattgtatgtctgggaaaaaattct
gagcaaacttttctcgctataaaattgattcaagaatttgctactaacaataggagatta
ataaccgagggtggaaagcgggcaatgtacatattgaatgatgaagataaatgcgtaata
ataggaacttacataaagcaattaactgatctgaaagtattagcatgtgattctgatata
cttaaggaatttgttgacagcgtcgaaagttctcacgtattagtaggaacaccaaaagtt
tatgcacaactaatgacagaaagcaagcttttaccgtgtcacataaatctagtcatagtg
gacgagtgccataagtctatcgaagacagcaatctaaagtttatccttcgaactttctta
ttgtgtgacaatgttcctagaataattggcttggcagtaccagtgtttaatttgacgcaa
gaacctgggagattaggcctagaaatagaaaaagtagaagctgcctttcagtgcggagta
gaaactgctaatgacatcctttcaataatacgatatagcccaaaaccaagagaatatgtt
gtggaatatgcgaaaggagaaaagggaaatttatacgatacgctcgaaagttgcgtactg
catgctattgaatttttacgtgaccatcgatatgatccaatggagatttacactgaggaa
ttttatgaggacattcagaaaattcctgatcctatacaaaagccatttgagatgctgcaa
gatttcttgcacatattagaaactcttggtccatggtgcgcagatcgtgctgctctagca
ttattaattttaacggaaaaattgaaaatcaaaactccttatgaaagacattatttatta
ttaaatatgatgacaactgtttttataaaaattcgtgctctttgtgataatgaatttcaa
catttatctgaaaaggagaagatatatcaatatagtacgccaaaagttcaccgattatta
caaatcttaaaaacttatactcctttttatactaaagagattaacactccggaaaaaaag
ataaatgctgatgttgatgttaaaaattgtgttacgaaaagtgacagagacgcttctttg
tcgaggattgaggaaaaaccagcggcacactctaaaaagtttagaactaattggaaattt
aatgatgataattataaaaggacatctaaatcgcaacgtcatccatgcaacactatggat
cctgatctactctgtggagtaatttttgtggataaaggatttacagctaaagttgtattt
tatttattaaatgaaataagtaagcacgatgaagatttgcattttctatcacctctttat
acgatcgaaagaaataccgatgacattggttatgcaagagatttagaaatggaatataga
aagcaggaagaggtcttaaagcgatttagaattcatgaatgtaatttattgatttccact
tcgattttagaagaaggtattgacattccaaaatgtaattttgtaatgagatatgacttt
cctaggaattatcagtcatatgtacaatgcaagagcagagcaagagctatagatgcattg
catgtattattggtaccgcaagaaacgtctaaggaattgatatggcaattagctcaatat
cagtatatagaaaagactttattattaaaatgttctaataaagagttaactgaagaagaa
gagaacgaagcagatatgtacactgcgatgataccacattacaagccacttgatggtgct
gatgctcctaaagtaacttttaattctgctatctcgttggttaataggtattgcgcaaaa
ttaccaagtgatactttcacgagattaacaccagagtggtctatcaatacggtaaagatt
aacgatacaggaatgtatacttgttcgttacgacttcccataaattcaccattaaagtat
gtagttacgtcatacccaatgccaaatagagcgatggctaggcgtatggctgctttgcaa
atgtgcattgacctacatcaagaaaacgaaatagatgataacttgttacccattgggaag
gaaaattttaaagctaaacccgaagatgctgaagtacctgctctgccagacgaaagtaga
gttgatttttcagaagccagacccggaacgacaaagcgccgacaatattattataaaaag
acagctgaagcattgatggactgtagaccgatagttggcacgccatcttatttgtatcac
attaatatggtactaagttgccctttgcctgaggaacaaaatacacgaggcagacgtatt
tatccacctgaagagtcagctatcggatttggtatacttacattaaaagaaatacccaag
ttgtgtccgtttcctatttatactaggtcgggcgaagttcatgtgcaattaaagcttagt
aaagaaagtgtaattttgaacgaggttcagctagaaaagattgacacttttctcaattat
acttttacaaacgttttaagattgcaaaagtatttaatgctgttcgatccaaatgcttca
gaaaattcatatataattgtaccagtaaagatatcagataaaggctcggacgttagcgta
gactgggattttttggagtgcatttatcagaatcggaatgcagtaccaaccaaggtccca
gaagaagaaaggaaaacttttaaatttgattcgtccaagtatcacgatgctgtgattatg
ccgtggtacagaagtcaagatcaaccacagtatttctatgtagcggaaatttgtacgaac
ttgaatccaaagtcttcttttcccggacacgattatagcactttcgaagaatattacttg
aagaagtacggtatacagatacagaatctagagcaatcgttgttagatgtagatcataca
tcggctagattaaattttctaacgcctagatacgtaaatcgcaagggtgtcgcgttgcca
acgagcagtgaggaaacgaagcgtgcgaaaagagaaaacttggaacagaagcagattctc
gttgccgagttatgtgctattcatccttttccagcgtccttgtggagacaggcggtctgc
ctgccctgtatactgtacagaattaatgctttgttgctcgctaatcaaatacgatgtcaa
gtcgcacaaatgataaacttgggtcaagaaaatttgaattcagattttgaatggccggca
ttagatttcgggtggagtttggcggaagtattaaagagatcaaaggaaacggaaaaggca
aagcagactaaaagtgaaaatgtgcaatgcaacgcgtcttcgaacaatgtgatctctaat
aaatgccaaaatatattagatcaggagaataataaagaaaaggcgtcgttcaatgaaact
gacaagccaattgaattggaatctgacggtactgataaaactgatgaggctaacgaagag
atcgatcagaaaagtaatgaattagagatcggcacctggtcaaatgacatggcatggtca
aatgatatagcgattgattccataaactatgatgcagaaaatctgaaatcgttccccttg
aatgtaacggtcttgccgcaagacttcggttggaacgatatccggtacggttcaccaaca
tgcgaatccgatttcgacggttacgaatcggatgacatatacagcgatggctttgcggat
acgtccgacgagagtgaggacgaaagtagaggtttaaagatttcctacatgggggaaaat
gttgccgaggcagtggaagatgaaaaacagatatgcaaacaagagatcaacaagaagatc
ttggatcttttggaaacggagaagaactatgacaataatttctggatgtacgcggaaaag
gatgaggaggtgttactcatgaagcataaagaagcgcattatgagtttactaagaagaag
gagcgtgacataatgaacgatggcactttcatatcttgtgattctgaaatcatgatgaaa
aggaggaactctctgagttgtcagatcgacaaagaacagccgaactgtaagcacgaggaa
tacaccaaaaccattgtaaagaaatttattgacgaagtattaaataaggagcctagtaaa
tctactcaatcggtaaaaaaagaaattagtatgcaaaacaaaatcagttacttagataac
gaattctttagtttcgattatcaaccagaattaaaaggccatccagggccaagtcctagt
ttaatcttgcaagctttaacgatgtctaatgcgaatgacggcattaatctggagcgattg
gaaacgatcggcgactcgttccttaagtacgctataacgacatatttgtattgcacatac
gataacatccatgaaggaaaacttagtcatttaaggtctaagcaggttagtaatttaaat
ctatacagacttggaagacagaaaatgcttggtgagagtatgatagcgactaaattcgaa
ccacatgataactggttgcctccgtgctattacgttcccaaggaacttgagcaagcgcta
atcgaatctggtgttccttcaaccttgtggaatcaggctgatattcccactttgcaagct
gtaaatcccagtgagataactcagctggttaaagaaactgaagagaaacttgttatcatg
aaaagcgaattggacaaaaacgaaagtagactgtcaaatactttggataatcttcgatgt
ttcataccttacaatttaattacgcaacacagtatcccagataaaagtatcgcggattgc
gtggaggctttaataggagcatatttaattgcatgcgggccccgtggcgcgcttctcttt
atgacttggctgggaattcacgttttgccggctaaagagatttgcgtggtaagcgaaaat
gagccagaagatagaatacctggtagtacgccgtacgttaaggaatttgatgaaagcgac
gagactacttggactcaaatgtattacggaaaattggaagaaccacaaaatccgttactc
agatacattcctgatccagaaaacgaattgcacatgatgctcgatggctatgaagagttg
gaaaaaaatataggctacaaatttcgtgatagtagttatctcttacaagcatttacacac
gcttcttatcagccgaacagattaacggattgttatcaacgtttggaatttctcggtgat
gctgtgttagactatttgataaccagacatttatatgaggattcccgacagcactcgccg
ggtgctttaacagatttaagatccgctttagttaataatacgatattcgcttctttagcc
gtgagatgtggattccataaatacttccgtcatctctctcctggtctaagtgtggtgata
aatcggtttgttagaatacaggaagaaaatggacattccattagcgaagagtattattta
attggtgaagacgaatgcgaggaagctgaagacgtagaagtaccaaaggcattgggcgat
gttttcgaatcattagctggtgctatttatttggacagcggaatgtccctcgatgcagtt
tggagcgtttattacgcgataatgaaatcggaaattgaacaatttagcacgaatgttccc
aagtcaccaatccgcgagttattagaattagaacctgaaacagcgaaattcggaagaccc
gagaaactagccgatggtcgtagagttcgagtaaccgtagatgtgttcggtaaaggttcc
tttaaaggaatcggacgaaattatagaatcgcaaaatgtacagcagcaaaatgcgccttg
aagaaattgaaaagcaaaatgcaaaattattcaaagccgaaactgtga
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