Ooceraea biroi (clonal raider ant): 105283641
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Entry
105283641 CDS
T05778
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04145
Phagosome
obo04512
ECM-receptor interaction
obo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105283641
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105283641
09142 Cell motility
04820 Cytoskeleton in muscle cells
105283641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105283641
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obo04147
]
105283641
00536 Glycosaminoglycan binding proteins [BR:
obo00536
]
105283641
Membrane trafficking [BR:
obo04131
]
Endocytosis
Phagocytosis
Opsonins
105283641
Exosome [BR:
obo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105283641
Exosomal proteins of colorectal cancer cells
105283641
Exosomal proteins of bladder cancer cells
105283641
Glycosaminoglycan binding proteins [BR:
obo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105283641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
EGF_MSP1_1
cEGF
COMP
EGF
Motif
Other DBs
NCBI-GeneID:
105283641
NCBI-ProteinID:
XP_011344872
LinkDB
All DBs
Position
4:1203187..1211857
Genome browser
AA seq
1154 aa
AA seq
DB search
MYRERVRMRILAGLILGVLVICTVDGTVIPDEDLTTSLKDVWYADEFIISLSNIKAKKIM
SGDSFQTLLAVKYAGLNTKMILLLDRWTKRVILEHIDESGRRSAGHVNVDTLAVDTPLKS
LVILVHQGPQVSRMDVYVDCGFQGSIPFKKNFREMPDMENLNVEVHRDRSCLAKIYKTLG
INEALKKEKCPSHLKHTPRTPDHHGHLPAHGRPDKLHPHGHHRETDDSNGQDSNGRGDAS
NPDDDRSDYSNPLDALNPYNLKNDPIRTLDKLDPHGSPNPWNPAQPNSLHGRPDRRRHDY
LKQTDMSGHSPHTRVPRRGDIGIQSLDEKACLTDSQIAKTLNELINVTKRIWTELELNKL
ETQHLRHLIEKCWACRTPMVPTLPPPPTCASNSPCYPGVQCRDTPSGPECGPCPYGYTGS
GRNCVKIFVTCADQPCFTNVQCYDTQDGYRCGPCPSGYAGDGERCERPCSRRPCFSGVEC
HLIDYSPYYRCGPCPSGYKGDGMTCYDINECELAQPCYTGVRCINLVPGYRCDSCPAGYT
GSKIEGIGIEMIKTQKQVCEDVNECLFKNGGCDLHAECINTQGSYECGACKTGYYGNQTA
GCHTQQNICPGFLISCDINADCISVYSQEYSCRCHVGWAGDGHACGRDSDNDGVPDKSIN
CQQLRCRTDNCPNVPNSGQEDSDRDGIGDACDTDADNDGVLNSADNCPLIYNPKQEDADS
DKIGDKCDNCPKVANVRQTDTDKDGKGDECDPDMDNDGHRNEADNCPRVKNINQSDIDRD
TVGDACDNCINIPNKDQADRDGDGVGDVCDTDADRDRDGVQDNIDNCPNVPNPGQNDIDH
DGKGNECDDDMDGDGIPNMIDNCPYVSNKDQLDLDHDGIGDACWNDNDNDKVINPYDNCP
NNSLIWATDFRQYTMIDLDPVDNVQPDPVWKIHHQGAEIKQLVNSDPGLAIGPDVIAGVD
FEGTFYIDDDWDDDFVGFVFSYQDNRHFYVVTWKKYVQDYWKHEPFLAKADPGIVLRLVQ
SQSGPGPILRNSLWHKDGRANEVKILWTDPKKIGWKQRKSYRWHLLHRPKIGLIRFWLYQ
GTTLITDSKNIFDSTLNGGRLGVYCFSQENITWSDLLYSCRETVPQNVWNELPTHLRNQI
EVKDSGFLQTKRVA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgggaacgcgtcaggatgcgaatcctggcggggctgatcctcggggtactcgtt
atttgcactgtcgacggtaccgtcatacctgatgaagacttaacgacaagcctgaaggat
gtgtggtacgcagacgaattcattatctccttgtccaacatcaaagcgaaaaagataatg
tccggcgactcattccagactctcctagccgtgaagtacgcaggattgaacaccaagatg
atactgctgctcgatcgatggacgaagcgcgttatactcgagcacatcgacgaatctggt
cgacgcagcgccggccacgtcaatgtggacaccctcgcagtggacacccccctgaaaagc
ctggttatcctggtgcaccagggaccgcaggtctctcgcatggacgtgtatgttgactgc
ggttttcaaggctccataccgttcaagaagaacttccgtgagatgcctgacatggagaat
ctgaacgtggaagtgcatagagaccgatcatgcctggcgaaaatttacaagacgttaggc
atcaacgaggcattgaagaaagaaaagtgtccttcccatctaaagcacacgccgcgcaca
cccgaccaccatggacacttgccagctcatggacggcctgacaagttacatccacatggt
caccatcgagaaactgatgactcaaatggacaagactccaacggacgaggcgatgcatct
aatccagacgatgatagatctgactattcaaatccgcttgatgcactcaatccatacaac
ttgaaaaacgatcctattcgaacactagacaagttggatccacatggaagtcctaatcct
tggaatcctgctcaaccgaattctttgcatggacgtccagatcgtcgtcgacacgattat
ctaaagcagacggacatgtcaggacactcgcctcatacgagagtgcccaggagaggcgac
atcggaatccagagtctggatgagaaagcttgtctgactgatagccaaatcgcgaagacc
ttgaatgaattgatcaacgtgaccaagagaatctggacggaattggaactaaacaaactg
gaaacacaacatcttcgtcatttgatcgaaaagtgttgggcgtgtcgtacacccatggtg
ccaacactgccaccgccgcccacgtgcgcctctaattccccgtgctaccccggggttcag
tgtcgcgacacgccgagcggacccgagtgcggcccgtgcccctatggctacaccggaagt
ggacggaactgcgtgaaaatcttcgtcacctgtgccgaccaaccgtgcttcacgaatgtg
caatgctacgacacacaggacggttacagatgcggtccatgtccaagcggatacgccggc
gatggcgaacgatgcgagcgcccttgctccagacgaccttgtttctcgggcgttgagtgc
catttgattgattattcaccatattacagatgcggaccatgcccgtcgggatacaagggc
gacggcatgacgtgttacgatataaacgaatgcgaactggcgcaaccctgttataccgga
gtgcgatgcataaatctcgtaccaggatacagatgcgattcatgtccggcaggatacacc
ggctcgaaaatagaaggtatcggtatcgagatgatcaaaacgcagaaacaggtctgtgag
gacgtaaacgagtgtctcttcaagaacggtggatgcgatctccatgcggaatgcattaac
acccaggggtcctatgagtgcggtgcatgtaaaactgggtattacggcaatcagacggcg
ggatgtcatactcaacaaaatatctgtccgggtttcttaatatcttgtgacataaatgct
gattgcatatccgtatacagccaagagtattcgtgcaggtgtcacgtcggttgggccggc
gatggccacgcatgcggtcgcgacagtgacaatgatggtgttcccgataagagtatcaat
tgtcagcagcttcgttgtcgcactgataattgtccaaatgtgccaaatagtggacaagaa
gactccgacagggatgggattggtgatgcttgcgataccgacgccgacaacgatggtgtg
ctgaattctgccgataattgcccgttaatttataatccgaaacaagaggacgcggattcc
gacaagatcggcgataagtgtgacaattgcccgaaggtcgcgaacgtgcgacagactgac
acggacaaggatggcaagggcgatgagtgtgacccggatatggataacgacggtcacagg
aatgaagcggacaattgcccaagggtgaagaatattaaccagagcgacatagacagggac
accgtcggcgatgcctgcgacaactgtataaacattcccaacaaggatcaagcggataga
gatggtgacggcgtcggagatgtctgcgacaccgatgccgatcgcgacagagacggtgtc
caggacaacatagacaattgcccgaacgtgccgaatccagggcagaatgacatcgaccac
gatggcaagggtaacgagtgcgatgacgatatggacggcgacggtatccccaatatgatc
gataactgtccttacgtgtccaacaaggatcaactcgacctcgatcatgacggtattggg
gatgcgtgctggaatgacaatgataacgataaggttattaatccgtatgataattgtccg
aacaacagtttaatatgggcgacggatttccgccaatacacaatgatcgatctcgatccg
gtagataacgtgcagcctgatcccgtatggaagattcatcatcaaggggccgaaatcaaa
cagcttgttaatagcgatcctggattggctataggaccggatgtaattgccggcgtcgac
ttcgaaggaactttctacattgacgatgactgggacgatgattttgtgggctttgtcttt
tcctatcaggacaatcgacatttttatgtcgtcacctggaagaaatatgtgcaggactat
tggaaacatgagccgttcctcgccaaagccgatcctggaatcgtattgagacttgttcag
tcccagtcaggaccgggtccgatactcaggaatagcctatggcataaggatggcagagcc
aatgaagtgaaaatcctctggacggatccaaagaagatcggttggaagcagcgcaaatca
tacaggtggcatttgttgcacagaccgaaaataggactgatccgattctggctatatcag
ggcacgacactgataaccgattctaagaacattttcgactcaaccctaaacggtggccga
ctgggtgtctactgcttctcgcaggagaacatcacctggtctgatctattgtacagctgc
agagaaacagtaccacaaaatgtatggaacgagttgcctactcatctgaggaaccaaatt
gaggtgaaggatagcggttttctccaaacgaagcgcgtagcctaa
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