Ooceraea biroi (clonal raider ant): 105283682
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Entry
105283682 CDS
T05778
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obo03016
]
105283682
Enzymes [BR:
obo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
105283682
Transfer RNA biogenesis [BR:
obo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105283682
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
Methyltransf_32
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
105283682
NCBI-ProteinID:
XP_011344950
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Position
10:complement(9009424..9011449)
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AA seq
412 aa
AA seq
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MADNHCMYFVKRKKRFCRMTVREGKRYCGEHQQDANDAGDERVECPLDPKHTCYQSKLTK
HLNVCNAKQRLDAQPAFVVKGVNLDSETTTVTLHVPLSQLDETVVNTVIKKIHSAYEKLP
KFSTVILQHDTLKARLSDEPCGNNARKHLLQNASLLGHLEQAGLLQDDTCFIEFGAGRAQ
LTYWLGQIIKHKSNSCILLVDRSSHRHKNDNKLKREESCLMVKRVHADIADLRLNQIAEM
QSIKNKVGIAKHLCGTATDLAIRCLVKSMNDEPKVNVCGLVVAFCCHHKCEYSSYIGKEY
LQQCGFTADEFPVLCKIVSWATCGGRLKNDAKSQHEVFNEQHSGKDIDQSSELLNEREFV
GRKAKTLLNWGRLVFLQSVGFQAELFYYTSTNVSLENMCIVAKQERERERST
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatcattgcatgtattttgtcaagcggaagaaacgtttctgccgtatgaca
gtgcgagagggcaaacgatattgcggcgagcatcaacaagacgcgaacgatgcaggtgat
gaaagagtcgagtgtccactagatcctaagcacacgtgttatcaatcgaaattaacgaag
catttaaacgtgtgcaacgctaaacaaagattagacgcgcagcctgcgtttgtggtcaaa
ggcgtgaacttggacagcgagacgacgacagtgacactgcacgtgccattatcgcagctt
gacgaaactgtggtgaatacggtgataaagaagatccactccgcctatgaaaaattgcca
aaattttcgacggtcatactccaacacgacacgttgaaagctagattgagcgacgaacct
tgcggcaataatgcaagaaaacacttgcttcaaaatgcatctttgcttggacatttagag
caagctggtctcctacaggatgatacttgttttattgaatttggagcgggaagagctcaa
ttaacatattggttggggcagattataaaacacaaatcgaacagttgcattttgctggtt
gatcgttccagtcatcggcacaaaaatgacaataaactcaaaagagaagagagctgttta
atggtaaagagagtgcatgcggacattgccgatctgcggttgaaccagatcgcggagatg
cagtcaattaaaaacaaagttggtatagcgaagcatctttgcggcacggcgacagatctg
gcgatacgctgcctggtaaagtcaatgaacgatgagcccaaagtcaacgtttgcggccta
gtcgtcgcgttttgctgccatcacaaatgcgagtactcgtcttacataggcaaagaatac
ctacaacagtgcggcttcaccgcagacgagttccctgttttgtgcaaaatcgtcagttgg
gcgacttgtggcggtcgtttgaaaaatgatgctaaatcgcaacatgaagtcttcaacgag
caacatagtgggaaggatatcgatcaatcttcggaattattaaatgaacgcgaatttgtc
gggcggaaagctaaaacgctactaaactggggtcgcttggtgtttttgcaaagcgttgga
tttcaggctgaactattttattacacctccaccaacgtttccttagaaaatatgtgtatt
gtggcgaaacaagaacgagaacgagaacgttcaacgtga
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