Ooceraea biroi (clonal raider ant): 105283771
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Entry
105283771 CDS
T05778
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5
KO
K13174
THO complex subunit 5
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105283771 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
105283771 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105283771 (thoc5)
03041 Spliceosome [BR:
obo03041
]
105283771 (thoc5)
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105283771 (thoc5)
Spliceosome [BR:
obo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105283771 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
ATAD4
Phyto_cutinase
Motif
Other DBs
NCBI-GeneID:
105283771
NCBI-ProteinID:
XP_011345108
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All DBs
Position
10:7216666..7221298
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AA seq
667 aa
AA seq
DB search
MGKENEPDGTKKRRKSVNTSSGTSVKDGDMYKTIISNEEKEAIERLPDDDSECFLTTCNN
IRAAMAKIAKLKASGDSNVKDEIHELQVQTSLAFIELKKLNRMEKFRTKFARDSLVAAKS
SVDSRHLHLQNLLYEVMHLKKEVVKCLQFKSKDELIELVPEEEFYKEAPESISRPETTKN
NQHQLRLARLEWELTQRKQLAVLCDELTESKKAVASSIETKQTRLDNLAPQLRSILAASK
PLQESLGLPLDKIRQEHQKASLLASPLYVLYAKASAYRDAYDSTLLVIVEGDEDEAKRAN
SQDSLQESDSDADAQSENVVEEAPVHKKRHHRLSREARQEEKRSKLLQRHPLHVKIVITL
KNETRLTLHFYYMIYLKVVTVESKLETEDLGGISAGDMLVSESVLRELYPGDLGLQSPNP
ANQYQLSRHNLGTFSSLGLGIPYRWAQRMAGLRFVSPDAGEQKVTSQELAQDCVESVLKE
IKRRIKARLDLCTEIRHLESGNLPIFISTTDPVPQKISTSLHRFTTMTWKSYSNFISSST
FCQRGLVSSVDIFYEAVLRRGSSELVARIAIKPDYPKIAPVFNVSISPMVPASADIVRDI
EREVNVMWTKSPTLTAQIQRLRACFDIYLETESMAPKEKIFFHPVRGRTRARPYKFLSLG
GGIFTHR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaacgaaccggacggcacgaagaagaggaggaaatcggtgaatacaagc
agtggaacgtcagtgaaagacggagacatgtacaagacaataattagcaacgaagagaag
gaagctatcgagaggcttcctgatgatgattccgaatgtttcttgactacgtgcaacaat
attcgagcagcgatggccaagatagccaagttaaaagctagcggagattcaaatgtgaag
gatgagatccacgagcttcaagtccagacatctttggctttcatagaattgaagaagcta
aaccgcatggaaaagttccgcacgaaattcgcgcgtgactctctcgtagctgcgaagagc
agcgtagacagtagacacttgcatttgcagaacctgttgtatgaggtgatgcacttgaag
aaagaagttgtcaaatgtcttcaattcaagtctaaagatgaattgatagagctcgttccg
gaggaagaattctacaaggaggctcctgagagcatttcgcggcctgagacaacaaaaaat
aatcagcaccaactaagattggctcgtctggagtgggaattgacccagagaaagcaactg
gccgtgttgtgcgatgaattgacggagagtaagaaggcagtagcgtcgagtatcgagacg
aagcagacgcgtttggataatctcgcgccacaattacgttctatattggcggcaagcaaa
ccgttacaagaaagccttggattgccgttagacaaaattcgacaggagcatcagaaagca
tcgttgctcgcatcgccgctctacgttctgtacgcaaaggcatccgcctacagagatgct
tatgatagtacactactagtcatagtggaaggcgacgaggacgaagcaaaacgtgcaaac
agtcaggacagtctacaagaatccgactcggatgctgacgctcagtcggagaacgtcgta
gaggaggcaccggtgcacaagaagaggcatcacagattgtcccgggaggccaggcaggag
gagaagcgatctaaattgctgcagcgacatccactgcatgtaaaaatcgttattacatta
aaaaacgagacgagattaactctccacttttattatatgatctacctaaaagtcgtgaca
gtggagtcgaagctagaaacggaagatctgggtggcattagtgctggggacatgctggta
tccgaatcggtcctccgtgaattgtacccaggagacttgggtttgcagagtccgaatccc
gcgaatcagtatcagctgtcacgacataatttgggtacattctcgtctctggggctaggc
attccctacagatgggcgcaaagaatggcgggtctacgtttcgtctcacccgatgcgggc
gaacagaaggtcacgagtcaggaattggcacaagactgcgtggagagtgtgctgaaagag
atcaagcggcgcataaaagcgcggctggatctttgcacggagatacggcacttggaatcg
ggtaacctgccgatcttcatcagcacgacggatccagtgccgcagaagatctccacgtcg
ctgcaccgattcacaaccatgacgtggaagagctactcgaacttcatcagctcgtcgacg
ttctgccaacggggattggtttcgtctgtggacatcttttacgaagccgtgcttcgccgt
ggcagcagtgagctcgtagcgaggatcgccataaagccggattacccgaagatagcaccg
gtgtttaacgtaagcatcagcccgatggtgccggcgtccgccgatatcgtcagggatatc
gagagagaggtcaatgtgatgtggacgaaatccccgacgttgacggcgcaaatacaacgg
ttgcgagcgtgtttcgacatctacctggagactgagagcatggcgccgaaggagaagata
tttttccatcccgtaagaggccggactcgcgctcgaccatacaagttcttgtcattgggg
ggaggcatattcactcatcgttaa
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