Ooceraea biroi (clonal raider ant): 105283850
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Entry
105283850 CDS
T05778
Name
(RefSeq) host cell factor isoform X1
KO
K14966
host cell factor 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03083
Polycomb repressive complex
obo04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105283850
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
105283850
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obo01009
]
105283850
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obo03036
]
105283850
03029 Mitochondrial biogenesis [BR:
obo03029
]
105283850
Protein phosphatases and associated proteins [BR:
obo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105283850
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
105283850
HMT complexes
COMPASS/SET1 complex
105283850
MLL-HCF complex
105283850
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
105283850
Mitochondrial biogenesis [BR:
obo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
105283850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Beta-prop_TYW4
NANM
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
105283850
NCBI-ProteinID:
XP_011345241
LinkDB
All DBs
Position
4:1738076..1749057
Genome browser
AA seq
1589 aa
AA seq
DB search
MAAPMLKWKRIANPTGPQPRPRHGHRAVSIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PSTKGDIPPGCAAYGFVVDGTRILVFGGMVEYGKYSNELYELQASRWEWKRLKPKPPKHE
PPPCPRLGHSFTLIGNKVFLFGGLANDSDDPKNNIPRYLNDLYTLELLPNGQTAWDVPQT
HGHAPPPRESHTGVAYTDRATGKSCLVIYGGMSGCRLGDLWFLDVDTMTWNKPIVHGPTP
LPRSLHTATLIGHRMYVFGGWVPLVVDDVKVATHEKEWKCTSTLACLNLETLTWEQLTVD
SLEENVPRARAGHCAVGVHSRLYVWSGRDGYRKAWNNQVRVCCKDLWYLEVSKPAAPSRV
QLVRASTQTLEVSWTASPSAQYYILQIQKYDMPPAAASGTFPPVSAPTSNVPVSATPAAV
TSPVMATTPATIPVTSPPVTTVAALPSSTPPAAAARSSVPTVASPAAAATPLRVQSAVQS
PVQKTLPTQAVQKPASPMTPRVATGNVIRIRSPLVTSTAATAAVTAAVAVTTEQQQTAVA
TTTTTVASGQTPAAMSGIAALAAAAAATPKITMNNVPILPQAATATATNTIRMKNVQPGQ
QIRFAAPGATVLRTASPQQSKQIILQKPGQNISGQPQIVHLLKTGQGMVATVPKVSLIPG
KTVQATGAKPLNQGPTILRLVNPNTVAGSKILTTMKTSSIVAMSKGQNITGKQTIMITKP
GGNGGLVGRTNQIIVVTTGSGLRAVQAVTTSQAGAGQGGNITTPVNVLPLSATNHVTNQQ
GVKMIVVSSGAMGGGTAGKPITITVPGQGGVPKTVTIATKGSPQAIFNPGKSQIVTMPQI
QKTPEAVTVSGKPVTLQMSGGIGAKTVTLMPTSSSIVTTSSASDSIDTSKMLFVPSQKQP
SASLASTSDGPATTDAALAALAAEAGLIDPVQEPSGGLSFMVATDDGGGGDDKIEDSCNG
NEATTAAALVSQMGAAETMQVDGDGNFVLPQVDGPIDFLLSEDEEKMDVDEEPATENTES
TADGVTAAEQDVNAAENVHAEESAVKEEIAAPETATADLAGSVASADGTSEETEGAAGNP
SADDPTPMDVSADSTELKSEKMEDLGNPLAEEAKAASELPFVQSSAEAQPEQPLAADVAD
SAVETDEAQNESNQTKNIKVESHLEKSPVPEELPTDSASSISHLARDEISEAEKSKNEIA
ESKSDLSTESSSLVKSESIGEPLIVDDSTSSAVDSMNATPVTTPVATPLKSEPIEEPVGQ
DKVSDLPVSSVNGVTTALEKETESPQKGLTPVKIEIKDELVSPKSLKQEKVNDARSETGD
DSTALTTLATAALGSAEPVKAKNDQQSEEEKKEAEWYDVGVIKGTSFTVQHYYLPGDEPL
DITQSLTMDVFKGRTKVTLEPGTAYKFRVAAVNSCGRSAWSEVSAFKTCLPGFPGAPSAI
KISKSADGAQISWEPPPSNVGPILEYSVYLAVRSTALNNDGEPKTVVSNPNQLAFIRVYC
GSSNSCSVNNSALNAAHVDTTTKPAIIFRIAARNDKGYGPATQVRWLQADPTTAVKSNPQ
VKRPGGTDPRSQASPQKKVKLDTAGDNFS
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacccatgctaaagtggaagcggatcgcgaatccgaccggaccccagccgaga
cccaggcatggccaccgggcggtctccattaaggaccttatggtcgttttcggcggcggt
aacgagggcatcgtcgacgaactgcatgtgtacaacacagcaacaaatcaatggtttgta
ccatccactaaaggagatataccaccgggatgtgcagcatatggtttcgttgttgatggc
acacgtattttggttttcggcggcatggtcgagtatggtaaatattccaatgaattgtac
gagcttcaagcaagtcgatgggagtggaaacgtttgaagccgaagcctccgaaacacgag
cccccgccatgcccgcgattgggccacagtttcacgctgatcggcaataaggtcttcctt
tttgggggtctggcaaacgatagcgacgatccgaagaataatataccgagatatctcaat
gatctgtacacgctcgagcttcttcctaacggccaaacagcctgggacgtgccgcaaacg
catggacacgcaccacccccgcgagaatcccataccggggtggcatacaccgatcgtgcc
accggcaaatcctgtctggtgatttatggcggcatgagtggctgtcgtctgggcgacttg
tggtttctcgatgtcgataccatgacatggaacaagccaatagttcacggtcctactcct
ctgccacgatcactccacactgccactttaatcggtcatcgaatgtacgtctttgggggg
tgggtgccattggtcgtcgacgacgtgaaagtcgcgacacacgagaaagagtggaagtgc
acaagcacgctagcatgtttgaatctggaaactcttacttgggagcaattgactgttgat
tcgctggaggaaaatgtccctcgtgctcgtgctggtcattgtgcagtcggtgtacatagc
agactctatgtatggtccggtagagacggttatcgtaaagcttggaacaaccaggttagg
gtatgctgcaaagatctctggtatctcgaggtcagcaaaccggcggcgccttccagagtt
cagctagttagggcttccacgcaaacgttggaagtgagctggacagcgagcccgtccgcg
caatactacatccttcaaatacagaaatacgatatgccaccggcagcagcgagcggcact
ttcccaccagttagcgcgccgacgtcgaacgtgcccgtcagcgctacgcctgctgcagta
acgagtccagtgatggcgacgactcctgcaaccataccggtcacgtccccgccggtgact
acggtcgctgctcttccttcgagtactccgcctgctgcggccgccagatcatccgtaccg
acagtagcgtcaccggcggcagcggcgactccgttaagagtccagtcggccgtgcaaagt
cccgtgcaaaagaccctgccgacgcaagcggtgcagaaaccggcgagcccgatgactccg
agagtcgccaccggcaatgttatacggattcgttcgcctctggtcacctcgacggcggca
actgcggcggtgactgccgcagtggccgtcactactgagcaacagcaaaccgcagtagcg
accacgactacaaccgtggcgtccggtcaaacacccgctgccatgtccggaattgccgcc
ctggccgcggcggcagctgccactccgaaaatcaccatgaacaacgttcctattctgcca
caagccgcgaccgccaccgcgaccaacaccatcaggatgaagaacgttcagccgggtcag
cagatacgtttcgccgcgccaggcgccacggtgttgcgcacagcttcgccacagcagagc
aagcaaatcatattgcagaaaccgggccagaacatatccggccagcctcagatcgtgcac
ctcctgaagaccgggcagggcatggtagctaccgtgccgaaagtgagcctcattcccggc
aagactgtccaagcgaccggcgcaaaacctctcaatcagggaccgacaatattgcgactg
gtgaatcccaacaccgtggccggctcgaagatcctcacgaccatgaagacgtccagcata
gtggcgatgagcaagggacagaacatcacaggcaagcaaaccataatgattactaagccc
ggaggtaatggtggcttggttggtaggaccaaccagatcatcgtcgtcactactggctcg
ggtctgcgagctgtgcaggctgtgacgacctcgcaagctggtgcgggacaaggcggtaac
atcaccactcccgttaacgttttacccttgtcggctactaatcacgtcacgaaccaacaa
ggcgtcaagatgatcgtcgtctcctcgggcgcaatgggcggtggaactgccggcaagccc
ataaccatcacggtaccgggccaaggcggtgtaccaaagacagtaactatcgctaccaag
ggcagcccgcaggctatcttcaaccccggcaagagtcagattgttactatgccgcagata
caaaagactcctgaagcggtcacggtgtctggtaagccggtaacactgcagatgtccgga
ggcataggcgcgaagacggtgacgctgatgccgacaagtagttccatagtaaccacttcg
agcgcgtcagattcaatagacactagtaaaatgctctttgttccatcacagaaacagcct
tcagcttctttagcatccacgtctgatggaccagcaactactgacgcagcattggctgca
ttagcagctgaagcgggactgatagatcctgtccaggaaccatcaggtggtctatccttc
atggtagctacggatgatggcggcggtggagacgacaagatagaggacagctgtaacggg
aacgaagcaactacggcggccgctttggtctctcagatgggcgcggcggagacgatgcaa
gtcgacggcgatgggaacttcgtcctaccgcaagtcgacgggccaatagactttctctta
tcggaagacgaggagaagatggacgtagacgaggagcccgctacggagaacaccgagtca
actgcggacggagtcacggccgcagaacaggacgttaacgcggcggagaacgttcacgcg
gaagaatcggcggtgaaggaggaaattgctgcgcctgaaacggcaacggctgatcttgcc
ggatcggtcgcaagtgcagacggaacttccgaggaaacggaaggcgctgctggcaatccg
tcggctgatgatccaacacctatggacgtcagtgctgacagcacggagttgaaatctgaa
aaaatggaggatcttggcaatccactcgcggaggaagcgaaagcggcctcggagttgcct
tttgtacaatcatcagcagaggcccaacccgagcagccgcttgcggcggacgtcgcggat
tcagcggtggagactgacgaggcccagaacgagagcaaccaaacgaaaaacataaaggtc
gaatcgcatctcgagaaatcgcccgtgccagaggagctacctactgacagtgcgagcagt
atatcgcatctcgcccgagatgaaatttcggaagctgaaaagagcaagaatgaaatcgca
gaatccaagtccgatctctcgaccgagagctcctctctcgtaaaatcggaaagtatcggt
gaaccgctgatcgtcgatgatagcacgtcatctgcggtagattcgatgaatgcgacgcca
gtaacgactcccgttgccacgccgttgaaatcggaaccgatcgaggaacctgtaggacag
gataaggtatccgacttaccggtttcgtcagtcaacggagtcacgactgcgctcgagaag
gaaactgagagtccgcaaaagggtctcacgccagtaaaaatagagataaaggacgaactc
gttagtccaaagagcttgaagcaagagaaagttaacgacgccagatcggagaccggagac
gactcgacggctttaaccacgttagctaccgccgctttgggctcggcagagccagtaaaa
gctaaaaacgaccagcagagcgaagaagagaagaaagaagcagagtggtacgatgtggga
gtcataaagggaaccagctttactgttcagcattattaccttcccggtgacgaaccgtta
gatattacgcaatctttgacgatggatgtctttaaaggaagaactaaagtgacattagaa
cccggaactgcctacaagttcagagtcgctgctgtgaatagttgtggacgaagtgcctgg
agcgaggtatcggcattcaagacgtgtcttccgggattcccgggtgcaccgagcgctata
aagatatcaaagtccgcggacggcgcacaaatctcatgggaaccgccgcccagcaatgtc
gggcccatcctcgaatattccgtttatcttgcagtgcgtagcaccgcgttgaacaatgac
ggggaaccaaaaacagtcgtgtcgaatccgaatcagttagcctttattagagtttattgc
ggttcgagtaattcctgttcggtgaacaatagtgcccttaatgccgctcacgtggacacc
actacgaaaccggccataatctttagaatagcagcacgaaacgacaagggatacggaccg
gccactcaggtcaggtggttgcaagcagatccaaccaccgccgtgaagagtaatccgcaa
gtgaagcgacccggaggcacggatccacgctcgcaagcttccccgcagaagaaggtaaaa
ctggacacggctggtgacaatttctcgtga
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integrated database retrieval system