Ooceraea biroi (clonal raider ant): 105283962
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Entry
105283962 CDS
T05778
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105283962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105283962
Membrane trafficking [BR:
obo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105283962
Protein recycling
Other Rab GTPase associated proteins
105283962
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PRANC
Motif
Other DBs
NCBI-GeneID:
105283962
NCBI-ProteinID:
XP_026829022
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Position
1:15513992..15517029
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AA seq
620 aa
AA seq
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MYSTKTPTLRIDEADLKCKNGCGFYGNAEWEGYCSKCHREHLQKRRAQAERVSHAQISDT
DNANRSTSAGSHKYYEEKKVQQEKKYKLLNISFRKPVAKVQGYQELYHELLKDNTDLEKV
KAENRDLLVYIAKTLVEKDVRKCIHSFVVDILQNKDIKRIEELSEITQNFYHVFGKRLEN
STKYADIPTDIKEKLLDYVERYAMTLLYRILFCPPFTTDEEKDLAIQKRIRQLNWVSGKN
LECRIHETSSEVRELVYTSITDLLNMDSAKAPQEKLACVIHCCRNIFLLLQQSVDGPASA
DEFLPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAE
SLNMAEKDFNAYMSGECVPANTWESALMICESLHFMCEDITLLDGLQAKNADIIKQTEEL
KNKMMDFKEKIKEDVSKVIERTPLLISHSQRVPTNLDSEDVESYQLPPPIIPQIYPHSIG
DNLNNGVMTDLSNDLMRTSLVEDSVTPSPTFDFPSFIADDSLEVSKAEDETSLISLDAQS
DLASGETQLFKKHMTDSLMDESPTPETNLPPALKPISSEDYHGFTIQGSNIPTIPCNTGD
SSITPADLDSENYSNYYQNM
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtattccacaaagacaccgactcttcggatcgacgaggccgatctgaagtgcaaaaac
ggctgcggattctatggcaatgcggaatgggagggttattgcagcaagtgtcaccgcgaa
cacttgcagaaacggcgcgcccaagccgagcgcgtgtctcacgcccaaatttcggacaca
gataacgctaatcgatcgacaagcgcgggaagtcacaagtattacgaagagaaaaaggta
caacaagaaaagaagtataagttgttaaacatttcgtttaggaaacccgttgcgaaagtg
caaggatatcaggaactgtaccacgagctcctgaaggacaatacagatctcgagaaggtt
aaagcggagaatcgagatctgctggtgtacatagccaagactctggtggagaaggacgtg
agaaagtgcatacactcgtttgtagtggacatactccagaacaaggacatcaagaggata
gaggaactctcggaaatcacgcaaaatttctatcacgtgtttggaaagcgcctggagaat
agcaccaaatatgcagacatacctacagacatcaaggagaagctgctggactacgtggag
aggtatgcgatgactttgttgtacaggattctcttctgtccgccgttcacgacggacgag
gaaaaggacttggctatacagaaaaggatacgacagttgaattgggtcagcggcaagaat
ctggaatgcaggattcacgagacgagctcggaagttcgagaactcgtttacacgtccatt
acagatcttctgaacatggattccgcgaaggctcctcaagaaaaattagcatgcgtcatt
cactgttgcaggaatatattcctattgttgcaacagtctgtcgacggaccggcatccgcc
gacgagtttctgccagcgctcatattcatcgtcctgaaggccaatcctgcgcgcctcaag
agcaatatcaattttattacgagattctgcaacgccagcagattgatgactggcgaggga
ggatattacttcacgaatctatgctgcgcagtgtcgtttatcgaaaacttgactgcggaa
tccttgaacatggccgagaaggacttcaacgcgtacatgtcaggagaatgcgtgccagcc
aacacgtgggagtcggctctcatgatatgcgagagtttgcactttatgtgcgaagatata
actctcttggacggtctacaagcgaagaatgccgatatcataaagcaaacggaggagctg
aagaacaaaatgatggatttcaaggagaagatcaaggaggacgtgagcaaggtaatcgag
aggacaccactgctaatatctcacagtcagagggtgcctacgaatttggacagcgaggac
gtcgagagctatcagctgccgcccccgattattccgcagatatatccgcattccatcggc
gacaacctgaacaacggcgtgatgacggacctatcgaacgacctgatgagaacgtcgttg
gtcgaggactcggtaacgccttcgcccacattcgacttcccatccttcatcgccgacgac
agcctggaagtcagcaaggccgaggacgagaccagcctcatcagtctcgacgcgcagtcc
gatctcgcgtccggcgagacgcagctgttcaagaaacacatgaccgacagcctgatggac
gagagcccgacgccggagacgaatttaccgcccgccctgaagccgatcagctccgaggat
taccacggcttcacgatccaaggctcgaacataccgactataccgtgcaacacgggcgac
tcgtccatcacaccggcggacttggactcggagaattattccaattactatcaaaacatg
taa
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