Ooceraea biroi (clonal raider ant): 105284167
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Entry
105284167 CDS
T05778
Name
(RefSeq) transient receptor potential-gamma protein isoform X3
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
105284167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
obo04040
]
105284167
Ion channels [BR:
obo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105284167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
105284167
NCBI-ProteinID:
XP_011345790
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Position
12:complement(6765267..6850984)
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AA seq
1207 aa
AA seq
DB search
MAADTARGRIAAVTGGFLRGSGQHVNFDPEAGPPPPPYPAAVAQQQTTSLLERPEIDKKV
KRHSIHGMMEEENVVRPHQEMASLSLQEKKYLLAVERGDVASVRRMLQKAHETEININCV
DPLGRSALLMAIDNENLEMVELLIEHKVDTKDALLHAISEEFVEAVEVLLEHEESFHKNG
DPHSWEALPPDTATFTPDITPLILSAHRDNYEIIKILLDRGSTLPMPHDVRCGCDECVTS
RMEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKCEYQEL
RRQCQDFATALLDHTRTSYELEVLLNHDPTGPAFEHGERMHLNRLKLAIKLRQKKFVAHP
NVQQLLASIWYEGLPGFRRKNLFLQVLEIVRIGILFPFLSVAYIIAPHSVVGQTMRKPFI
KFICHSASYFTFLFMLILASQRIESVIGNWMGHDVVEEPQPAPTKRGAAPTIVEWFILAW
VSGLIWSEVKQLWDVGLEEYAHDMWNVIDFVTNSLYVATVALRVVAYYRVQKENEEQKPG
FVTELQREQWDTWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMK
FFFLYVLVLFAFSCGLNQLLWYYADMEKKRCPTEWTYPPNANVTTDSNACIVWRRFANLF
ETTQTLFWAVFGLVDLESFELDGIKVFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQ
LISERADVEWKFARSKLWISYFEEGGTVPPPFNIIPTPKSAWYVAQWVYRKLCGHSRAAK
KEHMRTIRRKVKQASERDFRYQSIMRNLVRRYVTVEQRKAEGEGVTEDDVNEIKQDISAF
RCELIEILKNSGMNTSTAAGSGTDGRLKELSIGAGGKKNRQKERRLMKGFNIGPQPGGSG
TLPPVAEFIASLQQVQHENSHELFGSTLSGIFGPGATPKKSPHHTSTNSVPGLATGSRQS
RGTRSSSRKKRWGTLIEAAKAGKVSRLIGRSRSEDSVYSPASEDGGSRSEGSSDSKSSLE
TPGPDVQSVQHPHHSHSHHAHHHEAHHVFTHGLGPALAALRKKRKKFSASRSSTSAMTSS
TNTNPVDPGAMHSVATVLASRVSKKQLQRASSVPTRGPEMMPQSVSRRHEAIQSQQPSLD
VIEVASISEQQGVVSTGPLTPSTTEESVVVSGVPSKFTVKRNGSATQLQRLPGIEPISGH
DESAGWL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacacagcgagaggtcgaatcgccgccgtcaccggcggcttcctacggggt
tccgggcagcacgttaactttgatcccgaggccggccctcccccaccgccgtatcccgcc
gccgtcgcgcaacagcaaacgactagtctgctcgaacgaccggaaatcgacaaaaaagtc
aagaggcacagcatacacggcatgatggaggaagagaacgtggtgcgacctcatcaggaa
atggccagcctgtcgcttcaggagaagaaatatcttcttgccgtggagcgcggagatgtg
gcttccgttagaagaatgctgcaaaaagcccacgagaccgaaattaatatcaactgcgtg
gatcctctcggacgatcggctcttctcatggcgatcgataatgaaaatctggagatggtg
gagcttctaatagagcacaaggtcgataccaaggatgcgcttctccatgccatctccgag
gagttcgtcgaggcggtggaggttcttctagagcacgaggagagttttcacaaaaacggc
gatccacatagctgggaggctctgccgcctgatacagccacgttcacgcccgacatcacg
ccgttgatcctgtcggctcacagggacaactacgaaataataaagatcctcctagatcgt
ggatccactctgccgatgccgcatgatgttcgctgtggatgcgacgagtgcgtgacatcc
aggatggaggattccctcaggcattcgaggagccgaataaacgcctatcgggcactggcc
tcaccatccttgatagcactgtcgtctaaggatcctatcctgactgccttcgaactctcc
tgggaacttcgacgactatcgttcctggagcacgaattcaagtgcgagtatcaagagctt
cgaagacagtgccaagatttcgccaccgccctgctggaccacactagaacttcttacgag
ctcgaagtcctgctgaatcatgacccaacgggaccagcttttgagcacggagagaggatg
catctcaatcgtttaaaattagccattaaactgagacagaagaagttcgtggcgcatccc
aacgtgcagcagctactggcatcgatctggtacgagggtctgccgggattccggaggaag
aacttgttcctccaggtgctggagatcgtcaggatcggcatactcttcccatttctcagc
gtggcgtacatcatcgcgcctcacagcgtggtcggccagaccatgaggaagccgttcatc
aaattcatctgccactccgcgtcgtatttcacttttctattcatgttaattctggctagt
cagcggatagaaagcgtgatcggtaattggatgggacacgacgtagtcgaggaacctcaa
ccagcgccgacgaagagaggtgccgcgccgacgatcgtggaatggtttatattggcctgg
gtgtcggggttgatctggtcggaggtgaaacaattgtgggacgtgggcctggaggagtac
gcgcacgacatgtggaacgtgatcgacttcgtaacgaactcgctgtacgtagccaccgtg
gcgctcagggttgtagcctactacagggtacagaaggagaacgaagagcagaagccgggc
tttgtgaccgagcttcagcgggagcaatgggacacttgggatccgatgcttatctccgag
ggcctcttctctgccgccaacattttcagctcgctaaagctcgtctacatattctccgtt
aatccgcacctcggccccctccaagtttccctgtcgaggatggtcatggacattatgaag
ttcttcttcctctacgtgctggttctcttcgctttctcgtgcggtctgaatcaacttctg
tggtattacgcggacatggagaagaagcggtgtcccacagaatggacgtatccaccgaac
gccaacgttaccaccgactccaacgcgtgcatcgtctggcgcagatttgcaaatttattc
gagacgacgcaaacgttgttctgggcggttttcggtttggtggatctcgagagcttcgaa
ctggacggcatcaaggtgttcaccagattctggggtatgctgatgttcggcacttattcg
gtcatcaacatcgtcgttctcctgaatctcctgatcgcgatgatgaatcattcctatcaa
ttaatctcggagcgcgccgacgtcgagtggaagttcgcgaggagtaaactttggatcagc
tatttcgaggagggcggaaccgtgccaccgccctttaacatcataccaaccccgaagagc
gcctggtacgttgcacaatgggtgtatcggaagctttgcgggcatagcagggcggcgaag
aaggagcacatgcgcacgatcaggcgaaaagtcaagcaggcttctgagcgtgacttcaga
tatcaaagcatcatgagaaatttggtaagacgatacgtcaccgtcgagcaacgtaaggcc
gaaggcgagggtgtcacggaggatgacgtgaacgagatcaagcaagacatcagtgcattt
cgctgcgagctcatcgagatactcaagaattccggcatgaacacttcaaccgcggcgggc
agtggtaccgacggtaggcttaaagagctgtccataggtgcgggcggcaagaagaatcgt
cagaaggagcggcgcctgatgaagggtttcaacatcgggccacagccgggcggaagtggc
actctaccgcccgtggcggaattcatcgcatccctacagcaggtgcaacacgagaactcc
catgagctatttggctcgacactgagcggtatattcggaccaggtgcgaccccgaagaag
agcccgcatcataccagcactaatagtgtgcccggactcgccaccggatcccgacaaagt
cgtggtacccgaagcagctctcggaagaagcgttggggcacgctaatcgaagcggcgaag
gccggaaaggtctccaggctcatcggtagatctcgttcggaagattcggtgtattcacca
gcgtcggaggacggcggctcacgatccgagggctcgtccgactccaaatcctctctggag
acgcctggtcctgatgtacaaagcgtgcagcatccccatcactctcactctcatcacgcg
caccatcacgaggcccatcacgtgttcactcacggtttgggcccagccctggccgccctg
aggaagaagcgcaaaaagttctccgcgtcgagatcctccacgtccgcgatgaccagcagc
accaacacaaaccccgtggatccgggcgcgatgcattcggtggcgaccgtcctcgcgtcc
agggtctcgaagaagcagctgcagcgcgccagcagcgtgcccacccggggcccggaaatg
atgccgcagtcagtgtcacgacgacacgaggccattcagagccaacaacccagcctcgac
gtcatcgaggtcgccagtatcagcgagcagcagggtgttgtcagcacgggtccactgacg
ccgtctaccaccgaagagagcgtggtggtgagcggcgtgccgtcgaagttcaccgtgaag
cgtaacggatcggcgacgcagctgcaacgtcttcctggcatcgagccgatttccggccac
gacgagtccgccgggtggctctga
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