Ooceraea biroi (clonal raider ant): 105284410
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Entry
105284410 CDS
T05778
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105284410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
obo04990
]
105284410
Domain-containing proteins not elsewhere classified [BR:
obo04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
105284410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_CCN
TSP1_spondin
ADAMTS_CR_3
PLAC
Motif
Other DBs
NCBI-GeneID:
105284410
NCBI-ProteinID:
XP_026824010
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All DBs
Position
3:17277247..17348667
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AA seq
952 aa
AA seq
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MHRARCTSCDDEERPFVAFTDRSSSRRSRSCRAPQRRDSPHKEWPEPRSISSMDRSRKSE
DDSPPPCIFPGFPRPRCRQQSAMIRMNLGSILVLTMLSVAGISSSHIPEKYPIEVYHMLQ
ARTQYGIERDNRVRGTWGTWSSWSECSRSCGTGIQSQSRECVPLRRLLRRRSIISENGTS
SIKPICIGRYKRQHTCNTQECPNFPEDLRAEQCAKYNGRNYKGRSYVWVPFVDAPNSCAL
NCRAVGERFYATLEPAVIDGTPCDAPNLLRGRGAGGGISTERNGERWLCVAGQCKPVGCD
GVVGSGAMMDACGVCGGQGRGCRLFEGIFMEPILPKGHQQVNTIPKGAMSLNISELRFSS
NFLALRDSNGSYILNGPWSYSPSGTYKAAGTTLTYQRGDRNRMECIVAIGPLNESLHLEI
LSVELNPGVLYKYMLPTKEVPDSKAVIAPPLLVAGSNDRGNEIPSPDNHVTVRAPVTRIS
DRRSDLSSTRRDRDPLRRPHDGGRKEEMKHPPTTVMAGDQPKSKATRKKRRRKFAWKIVG
FAACTKECGGGVQTAILKCIREINQTPVNDKRCHIVEKPKLPPPLRCNDHPCAARWRAEP
WSECSVTCGVGVRTRKLECVQELNARLTMHVAAGACVQPPDLSTVEACNLPACPNVAPEL
RHMHSQHDMPRWDVGVWGPCSATCGRGTRNRTVTCITSGKSCSLADKPESQKACEVAACG
ATSSDMGHHAPWLYSEWSSKCSAECGNGVRIRRVACADGSELFCNPKERPDTETYCFRRG
TNCDRAKWFAGPWTSCSVSCGVGVQHRDIACIARTGDQFVVLPARNCSDPEPASEQVCRT
PACSPEWFTSSWSTCSATCGVGVQTRLVRCILEGVSSTSCPEIGKPDAEQRCNAEPCEKE
PTTVREVASRPPKKVRDESSKCVDKYLNCALVIKNGLCRLKYYRDSCCQCRH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgagcgagatgcacctcctgcgacgatgaagagcggcctttcgtcgcgttcacc
gatcgatcgtcttctcgtcgatcgcgatcatgccgcgcaccgcaacggcgcgattcgccg
cacaaagaatggcctgagcctcggagcatatcctccatggaccgttcacgaaaatcggag
gatgactcgccgccgccgtgcatcttcccgggatttccacgtccacgatgtcgccagcaa
tccgccatgatcaggatgaatctgggatcgatcctagtcctgacgatgctgagtgtggcc
ggcatctcgtcctcccacatacccgaaaagtatcccatagaagtgtatcatatgttacaa
gcaagaacgcagtatggaattgaacgtgacaacagggtgagaggaacctggggtacgtgg
agctcctggagcgagtgctcgagatcctgcggtactggtatccagtcccaatctcgagaa
tgtgtccctctacggagacttttgaggaggcgaagtattatctcggagaacggcacgagc
agcatcaagcccatttgtatcggcaggtacaagcgccagcacacgtgtaatacgcaggaa
tgcccaaacttcccggaagacctgcgggcggaacagtgcgccaagtataacggcaggaac
tacaagggccgcagttacgtctgggtgccctttgtagacgcgccaaactcctgcgcgctc
aattgccgtgcagtcggcgagcgtttttacgcaacgcttgaaccggcagtaatagatggc
acgccctgcgatgccccgaatcttcttcgtggacgcggcgccggcggcgggatttcgacg
gagcgcaatggcgagcggtggctgtgcgtcgccggacaatgcaagcctgtagggtgcgac
ggggtggtcggttccggagcgatgatggacgcctgcggcgtgtgcggcggccagggtaga
ggatgcagattgttcgaaggcatcttcatggaaccgattctgcccaagggccatcagcag
gtgaacacgattccaaagggcgccatgtcgctcaacatctctgagctacgattcagtagc
aattttctagcgttaagagacagtaacggcagttacatcctaaatggcccgtggtcttac
agtcccagtggcacttataaagcggctggcacgacattaacatatcagaggggcgatagg
aaccgcatggagtgcatcgtggcaatcggaccgctgaacgagtctttgcatttagagatc
ttatcggtggaattaaatccaggcgtcctgtacaagtacatgctacccacgaaggaagtg
cccgacagtaaagcggtgattgcaccgccgctgcttgtcgcaggatcgaacgatcggggc
aacgaaatacctagtccagataatcacgttaccgtgcgagcgcccgtcacaagaatatcg
gatcggcggagcgatttatcttcgacgcgtcgcgatcgcgatccgctgcgcagaccgcac
gacggcggacggaaggaagagatgaagcatccgccgaccacggtgatggcgggcgatcag
ccaaagtcaaaggcgacgaggaagaagcggaggaggaagttcgcttggaaaatagtcggc
ttcgctgcgtgcacgaaggaatgcgggggaggcgtacagacggcgatcctgaagtgcatt
cgcgagatcaatcagacacccgtcaacgataaacgctgtcacatcgtggagaaaccgaag
ttgccgcccccgctgcgttgcaacgatcatccttgtgccgccaggtggagggccgagccg
tggagcgagtgctcggtcacgtgcggcgtcggcgtcaggacgcggaagctcgagtgcgtc
caggagttgaacgcgcggctgacgatgcacgtggctgctggcgcgtgtgtccaaccgcct
gatctgagcaccgtggaagcttgcaacctgccggcctgtcccaacgtggcccccgaattg
aggcatatgcactcgcagcacgacatgcccaggtgggacgtgggcgtttggggcccgtgc
tcggcgacatgcggtcgtggaacccgaaatcgaacggtgacttgcataacgtctgggaag
tcctgctcgttagccgacaagccagaatctcagaaagcgtgcgaggtagcggcttgcggt
gcgacgtcgtcggacatggggcatcacgcgccctggctctactcggaatggtcttcgaag
tgctcagcggaatgcgggaacggcgtgaggatcagacgagtggcgtgcgccgacggtagc
gagttattctgcaatcccaaagaaaggccggacacagaaacgtattgctttagacgagga
acgaactgcgaccgagccaagtggttcgccggtccatggacttcctgttccgtctcgtgc
ggcgtcggcgtgcagcatcgcgatatcgcatgtatagccagaacgggtgaccagtttgtc
gtattacccgcgaggaattgcagcgatccggagccagcgagcgaacaggtctgccgaacg
cccgcgtgctcgccggaatggttcacctcgagctggtcaacgtgttccgcgacctgtggg
gtcggagtgcaaacacggctcgtacggtgcatcctcgagggcgtgagtagcaccagctgt
ccagagattggcaaaccggacgcggagcagcgatgtaacgcggagccgtgcgagaaggag
ccgacgacggtgagggaagtggcgagcaggccgccgaaaaaggtgcgcgatgagtcgtcc
aagtgcgtggacaagtatttaaattgcgccttggtgatcaagaacggcctgtgtcggctg
aaatattacagggactcgtgctgccaatgccggcactag
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