Ooceraea biroi (clonal raider ant): 105284509
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Entry
105284509 CDS
T05778
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105284509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105284509
Membrane trafficking [BR:
obo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105284509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR5
zf_RING_Vps8_fungal
Prok-RING_1
TPR_VPS8_2
zf-RING_Vps41
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
PQQ_2
WDR55
zf-RING_5
Rtf2
zf-RING_UBOX
Beta-prop_IP5PC_F
Beta-prop_THOC3
Beta-prop_WDR3_1st
zf-RING_11
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105284509
NCBI-ProteinID:
XP_011346386
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Position
6:complement(16535100..16541471)
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AA seq
1301 aa
AA seq
DB search
MAENELVSDTDEYLVTEAINLDIEELDNTEYAIPAVEELPTLESILMEPDYESLSETDDD
VGIPLEEKLGSSETTSIGSHLSLNSLNKSSKISQKSPTGVILRHVILKGITSQIISANER
VNAGLASAVAAGGNMLVIGTSHGLILGFDLSQTLRWCDQEARHQGSVSALCFNYEGNRVL
AGFVRGHVLMLDSSNGKVLRILTDVHPLDTAVLHVKFTDSPKIALCSDSGGSVFELNFTR
VMGVRGCDSRCLFSGSKGEVCTLEPLLLNHLPSHPLKNYTLVAMATLSKVIVVCIRPRMR
VVLSHPLTGAPTAPPQVSWQLVVIQAADGSRVIDPVLALARDNVVHFYQVYTEVGSRVKL
SPLQRITLPYTISNLRWLNPRSLIVLDSQEKLHLLDVRAQDNLETLDMSRVAISYASSHF
KGLSTGGNVSKAMALAGERACYNTVVVFGAQLLLLGIKSLHTICIRTWTERLQHLIMQKR
FPEALALGLSFYQDKGKAVIGLRGSKQRRKQIARDKVCHVLIEYMDELNHCLVDENVDYD
TMVLTCVNYCIQLESLDLLFGKLWDIVFESEDLKVSYLHALEAPLLDGSLQPRLPPLIAQ
QLVTLYDQEDRVDSLEAIIVLLNVDCLDIHQVTTVCRQRGLWEALIHLQTTALGDFTAPI
HQLVPVLQNLLRESAVNLSRDCIKLGNAILVYTSCCLAGRGFHKDELPEGMPQKAKADTL
RALLSQHSSLANDAERQYPYLRTLLQFDAKGFLDVIAIAFQEPEFISEMGLRHRQRLIDI
LLNIVMPNTPVSPKSMDYITIEQQFMVLMFVANELSESTITLEPSVLSRMIDLLCIDSHI
ELLKDYKTERESAVLALLHSKKLCNISDNTLLNLANRAGFVRVAELLYSAREDWVAVCKC
MISESSRHHDVWPWLEHLSPASLEHVISVHISTLVTINANQFATIIATQQLQNKIDAILQ
KLNGDLNLEYKLLGALYQIAQYKEEDISLELTTDQLERYLMLMCELEPMRVVVHLHGPHG
CRLDEALKIVQRWNCKDAEAVMLEKLGSYQEAFNLLLKEFENRLEMYRENKISESETVHA
AGQLAGICRRSAGNVDWMPLVEAVFRSHTWNNKQNTDNLSGKLLRLILESLSGTSILSNI
LEQILRNPLATSGTIGDIRQLLAGVLTQSRYEQTLVETTARLVSLELHKALEKSLRDAGR
AYGNISTICPVCRQPLSHCSDYVVMFSCGHGYHSTCLSETKSCYKCLNTKGWAPIATNIA
HAAPEPPLRKKQLLPPEFLRHKDLTLRLAPPCSIPDLEGIF
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgaattagtgtccgataccgacgagtacctcgttacagaagctattaat
ttagatatcgaggagttagataatacagaatatgccataccagctgtggaggaattaccc
accttggagagtatattgatggaacccgattatgaatcgctatcagaaacggatgatgat
gttggcataccgttggaagagaaacttggcagtagcgaaacaaccagcatcggtagtcat
ctatcattaaattcgttgaacaaatcttccaagatctctcagaaatcgcccacgggtgtt
attttaaggcacgtcatactcaaaggaatcacatcacaaattatatctgccaatgagaga
gtcaatgctggtttagcgagtgcagttgcggctggaggcaatatgttggtaattggcact
agccatggtttgatattgggctttgacctgtcacaaacgttacgttggtgcgatcaggag
gcgagacatcagggttcagtctctgctctttgctttaattacgagggcaacagagtgcta
gctggttttgtcagaggacatgtattaatgttagatagcagtaacggaaaagttttaagg
attcttactgatgtacacccacttgacactgctgtattacatgttaagtttacagattca
ccaaaaatagctttatgtagcgatagtggcggctcggtgttcgaattgaattttaccaga
gtgatgggtgtgagaggttgtgatagtagatgcttatttagcggttctaaaggagaggta
tgcactctagaaccattgctactgaatcacctgccctcgcatccgttgaagaattatacc
ttggtagcgatggcaacgttatcaaaggtcattgtagtttgcataaggccacgaatgcgt
gttgtactaagtcatcctttgaccggtgccccgacggcaccaccgcaagtgtcttggcag
ttagttgtcatacaggcagctgatggatctcgtgtgatcgatccagtattggcactcgca
agggacaacgtggtgcacttttatcaggtgtacactgaggttggttcgcgggtaaaatta
tctcctctgcagaggataacgctaccatacacgataagcaatttgagatggctaaatcca
aggtctcttatagtattggacagtcaggagaagctacatttgttggacgtgagagcacag
gataatttggagacgttggatatgagtcgtgttgctatttcttatgcttctagtcacttt
aaaggattgtccactggcggcaatgtctccaaggcaatggcattggctggtgaacgagcg
tgctacaataccgtcgtggttttcggtgcgcagctattgttattaggtataaagagttta
catacgatctgcataagaacatggacggaaagattgcaacacttgatcatgcagaaacgg
tttcctgaagcgttagcactcggcctttccttttatcaagataaaggcaaagcggttatc
ggtctccgtggttccaagcaacgtcgcaagcaaatagcgcgcgacaaagtctgccacgta
ctgatcgagtatatggacgaattgaatcactgtctcgtagatgagaatgtagattatgat
accatggtactaacttgcgtcaattactgcatccaactagaaagtttagatctacttttt
ggaaaactgtgggacatagttttcgaatcggaagacttgaaagtgagttacttgcatgcc
ctcgaggctcctctgttggatggaagtctccaaccgagactgccgccattgatcgcccaa
caattggttactctgtacgatcaagaggacagagtcgattcgctggaggcgatcatagtt
ctgctcaacgtggattgtttagatattcatcaagtaacgacagtttgccgtcaacgagga
ctttgggaagcactgattcatctccagacgaccgcattgggtgatttcacggcgccaatt
catcagttggtaccggtactccaaaatttattacgcgagtcagcagttaatctttcacga
gactgcataaaactcggcaatgccattctggtttataccagttgttgcctcgccggtcgt
ggatttcacaaggatgaacttcccgagggcatgccgcaaaaagcgaaagcagacacgcta
agagctctactgtcccaacattcgagcctagcgaatgacgcggaaagacaatatccatat
ctgagaacgttgctgcagttcgacgctaagggctttctcgatgttatagctatcgccttt
caggagccggaatttatttctgaaatgggcttacggcaccgacaaaggctcatagatatt
ttgttgaacattgttatgccgaatacaccagtcagcccaaagagtatggattacatcacg
atagagcagcaatttatggttcttatgttcgtggcaaacgagttgtctgaaagtactatt
acgttggagcctagtgtgttgagtagaatgatagacctattatgcattgattcgcatata
gaattgttgaaagattataagactgagagagaaagtgccgtgttggcgttactgcattct
aaaaagctgtgcaatatttctgataatactttactaaatttagcgaatagggcaggcttc
gtaagagtcgccgagttattgtacagcgcacgagaagattgggtagcggtgtgtaaatgt
atgatctcagagtcgtccaggcatcatgatgtgtggccctggctagagcatttgtcacct
gcctcgttagaacacgttatatccgttcacatctcgactctcgtgacgatcaacgccaat
cagtttgctacgatcattgctacgcaacaactgcagaacaaaattgatgcgatactacaa
aagctcaatggtgatttaaacttggagtataagctgctaggagcattgtatcaaatcgcg
cagtataaagaggaggacatttctctggaattaacaactgaccagctggagagatattta
atgttgatgtgcgaattggagccgatgcgagtggtcgttcatttgcacgggccgcatggc
tgcagattggacgaggcactgaagattgttcaaaggtggaattgtaaggatgcggaggca
gtaatgttagagaagctgggcagttatcaagaagcgtttaatcttttgctgaaagaattt
gagaatcggctggagatgtatcgagaaaataaaatctcggagagcgagacggtgcatgct
gctggacagctcgcggggatatgtcgaagatcagcaggaaatgtagattggatgcctctt
gtggaagctgtatttcgatcgcacacatggaacaataaacaaaatacggacaacttgagt
ggcaaattgttgagattaattctggaatctttgagcggaacgtcaatcctatcgaacata
cttgagcaaatcctacgaaatccactggcgacaagtggcacgataggggatatacggcaa
ttgctggctggagttctcactcaatcacgatatgaacaaactctggtcgaaactaccgca
cgattagtgagcttagaacttcataaggctttggaaaaatccttaagggacgctggaaga
gcatatggcaacatttccacgatctgtcccgtgtgcaggcaaccgctatcacactgttcc
gactacgtggtgatgttcagctgcggtcacggatatcactcaacgtgtctaagtgaaact
aaatcatgttacaaatgcttgaacacgaaaggatgggcacctatcgctactaatatcgca
catgctgctcctgaaccaccactgagaaagaaacagcttcttccgccagaattcctgcgt
cacaaagatctcacgttaagactggcgccgccctgttccattcccgacctcgagggtatc
ttttaa
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