Ooceraea biroi (clonal raider ant): 105284530
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Entry
105284530 CDS
T05778
Name
(RefSeq) trithorax group protein osa isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105284530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obo03000
]
105284530
03021 Transcription machinery [BR:
obo03021
]
105284530
03036 Chromosome and associated proteins [BR:
obo03036
]
105284530
Transcription factors [BR:
obo03000
]
Eukaryotic type
Helix-turn-helix
ARID
105284530
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105284530
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105284530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
105284530
NCBI-ProteinID:
XP_011346425
LinkDB
All DBs
Position
6:complement(16377545..16396980)
Genome browser
AA seq
2107 aa
AA seq
DB search
MAATQAESQQNDVKLNESVKCAQKRTQVGGNSASASAKQQLDPEPDDKVPRGAAQLLKYV
NRGGDTTGYEMSQYREDIGGHTAAGEVKSPREAGQVPQEPVGKQETHDAPGHPGHPGHPF
APNVMRDYTDEYSNKSGEFAASKSLADYSTGKQLPEYVAKHVDFPGKQLDYHGKHLMHES
ERAHRVVEMEEHYSATKIESRLTYVGTSPGNFSNQPRFLSGQSISQATGPTPTLNQLLQA
STPVHRFHGNYPGMAPEYQQPWPMQRPPVVPPVYPQPSQRPPQTGSPRLHTGPGGQSSPT
PMQYQQYTQRYSSPTRPHAPYSHHQLNSYTTQSSHPSSLYTEQRGWNQGGPPNPPPPPSN
QVTPSGQSPQRALSQSPAPPPAASPQPQATSQSQAFHNLQQRSTTPNTQGIDSGELSGQN
SNDSSNGPACPGTPNSQGMRPTPSPTGSTGSRSMSPAVGRSFLRQQNVQMPPRPSSSQSD
GSGPAPRMSHSPMTTQGAYQQPLGPSPHMHTYKMNSTGPGVVQPGPGSTALGGISPMGGG
MGYAAGATAPGQPGGYHAQSTYPPPRPHMQFPQGYPTPANSQPPPNNQYQPPNRPNNLVQ
YPPYTHKMGFNSVPPGMPPSPGPPQVYGASGTAMVPPGAPGVPVIGNMGPPASSMGPPPP
SPNHISNQPPPPTSSAVPHLHTPAATPPLNHEGSPMPPPSTTPNSHPASAPTPISHNSAD
LTAETSNDSGITTTASGTSAINVISTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASAAS
GEDPAFTPKVRKEMMGGYHSHPATPQSTVPSPGAASINSIHEEYSDMNSPGWPRTPASPV
FNSHVPQDPYRSKKPDSLAKLYEMDDSMERRTWLDKLVTFMEERRTPITSCPTISKNPLD
LFRLYLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHF
DRGGVDPQPIINQVEAGSKKKGSKGTASVPSPGSSNSQDSFPAAGSSNASMDGYGSYQSS
YAGGTPGGPSSEYTPPPPRPPSQSSAPSAHQGIQQGSYQNTGSYQNYPQEQYVRPQGNTL
SQQSEFNQPYSPRSHYPPYVPDVDRGYPGSTMPPNNATGQDMYNRYTSGQQGPASYPTGT
PPNARNNSYPSGPQAHPATVQQQTATSQPSSPSQPPAATSYSCQQEYYRQEQSGYGAPGG
TQIYAGGASANKNMPPPPPGPSQPRRHPDFAKDQQYPQYNQQRPAYPGWPNTTNQYNSSS
GNNRVQYPSQQTQSPSQQQQQQQQQQPQPVPQVGSAAPPASVAVGGMTSSQQWVASQQPN
RSSSQPPLNTIAHAPPPWDHRYTNQPSPLYPAPGTHQNQLGVNPMISQQPTSKREMTFPP
DSVEAITPLLYKRRKLARAEVAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVSY
FGLAHLPGLLDVLLEHFSRSLSDMFELCVNDDDRYCQSADGPEVDLGAVTRPIDSEDRTK
LLSTSNYTYLSRRGRPVKIVPRDDDLFVLDTRRSWDHQECESETEPWQVDANATKYIVTC
FQSEMGSVPFARLLRDEKPPLLQKEVDSTDSKDEVKADGVGGVHETLDLFSKSGDLGDKQ
SGKEGGERKQQQQQLDKKKKTKTLSDVLSRIKKEPVEMNDLTRELFEKKNDGFKKDCDNE
TAKANNNMGEHLGSDVSKNDEDSLPTQNGLNDSAAPIAVTTGNIGNLDKSEIKTETTTDE
QELGMRDDKEGPRLKIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDSLARRCVCL
STILRNLTFIPGNEAEFAKNVTFLSLLGKLLLLHHEHPVRAQKTRNYDREEDADFADSCS
SLQGESEWWWDFLHHVRENVLVMAANISGHMDLSQHPEEISRPVLDGLLHWAVCPAAHGQ
DPFPTVGPNSSLSPQRLALEALCKLCVTECNVDLVVATPPYSRLQRLCSVLTRLLCRSEE
QVLREFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAETSALGVANQHGLAALRD
NPESMGTSLDMLRRAAGTLLNLARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVL
FQCSRGT
NT seq
6324 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcaagccgagagccaacaaaacgatgtgaagctgaacgagtccgtgaaa
tgcgcacagaagcgtacgcaagtcggtgggaatagtgcgagtgccagtgcaaaacagcag
ctggatcctgagccggacgataaggtgccccggggcgcggcccagctgcttaaatatgtg
aatcgcggcggcgacacgacgggctacgagatgagtcaataccgcgaggacattggcggg
cacactgccgccggtgaggtaaaatcgccgcgcgaggccggtcaggtaccccaggagccc
gtcggcaagcaggagacgcacgacgcgcccggccaccccggccatccgggccatccgttc
gcgccaaacgtgatgcgcgactacacggacgagtatagcaacaaatccggcgagttcgcc
gcgagcaagtcgctcgccgattattcgaccggcaagcagctaccggaatacgtggcgaag
catgtcgactttcccggcaagcagctcgactaccacggtaaacacttgatgcacgagagc
gagcgggcgcaccgggtcgtcgagatggaggagcactactccgcgacgaagatcgagtcg
cgtctcacgtacgttggcacgagcccgggcaacttctccaaccagccgaggtttctctcg
ggacagagtatatcccaggcgaccggtccgacgcctacgttgaaccagttgctgcaggcg
tccactccggttcaccggtttcatggcaattatccagggatggcaccggagtatcaacaa
ccatggcccatgcaaaggccaccggttgtacctcctgtttatccgcaacctagccagcgc
cctccgcaaacgggctcaccgagattacacacagggccaggaggacagagttctcccaca
cccatgcaatatcaacaatatacccaacgatattcttctcctacgagacctcatgcacct
tatagtcatcatcagctaaactcttatacaacgcaaagcagtcatccctcgagtttatac
acggaacaaagaggatggaaccaaggtggccctccaaatccacctccaccaccgagtaat
caagtcactccatcgggacaatcaccgcagcgtgctttgtctcagtctccagcaccgcca
cctgctgcgtcgccacagccacaggctaccagtcaatctcaagctttccacaatctgcaa
cagagatctacaacaccaaatactcaaggaattgattcaggggaactatcaggacagaat
agtaacgacagttcgaatggaccagcttgcccagggacaccaaattctcaggggatgaga
cctaccccgtcaccaacaggatccacaggttctcgctcgatgtcccctgctgttggtcgg
tcttttttacgtcaacaaaacgttcagatgcctccacgcccgtcaagcagccaatcggat
ggtagtggaccagcaccacgcatgagtcattctcctatgactactcaaggagcataccag
cagccattgggtccttcaccacacatgcatacctacaaaatgaacagcactggtcctggt
gtagtgcaaccgggacccggttcgacggctctcggtgggatcagcccaatgggtggtggg
atgggctatgcagctggtgctacggccccgggtcaacctgggggttatcacgcgcaatcc
acgtatccacctccgcgtcctcacatgcagtttccgcaggggtatccgacacctgcgaac
tcacaaccaccacctaacaatcagtatcaacctcccaacagacccaataatttggtacaa
tacccgccgtacacgcataaaatgggcttcaacagtgtgccacctggaatgccaccgagt
ccaggaccgccacaggtttacggtgctagcggtaccgcgatggtaccgccgggtgcacct
ggagtacctgtcattggtaacatgggaccgcctgcgagttccatgggcccaccaccaccg
tctcccaatcacataagtaaccagccgccaccgcctaccagctcggcggtaccgcacttg
catactccagcggccacaccgccgctcaatcacgagggcagcccgatgccgccgccgagt
actacaccgaattcgcatcccgcgtcggcaccgacgccaatcagccacaattccgcagat
ctcacggctgagacttccaacgacagcggcataactacaaccgcttcaggtacgtcagct
ataaatgtcatatctacttcgagtggtactgtgacatctgtaataacgacaggtccagac
ggcacgtctctggatgaaggttcgcaacaatcaaccttgtctaatgcatcagctgcttct
ggtgaagatccggcattcacaccaaaagtacggaaggagatgatgggaggataccacagc
catcctgcgacgccgcagagtacagtcccgtctcctggcgccgctagcatcaattcgatt
cacgaggaatattctgacatgaacagtcctggttggccgcgtactcctgctagtcctgtg
tttaacagtcatgtgcctcaagacccatacagatctaagaagccagatagtttggcaaaa
ttatacgagatggacgactcgatggaacgacgaacctggctggacaagctggtcactttc
atggaagagcgaagaacaccgatcaccagctgtcctaccatctccaagaaccccctcgat
ctgtttcggctatatctctacgtgaaggagagggggggcttcatggaggtatgcaaggtg
acgaaaaataagacatggaaggatatagccggcctgttgggtatcggcgcgagcagcagc
gcagcgtacacgttgcgcaaacattacacaaagcacttgctggcatacgaatgtcacttc
gatcgcggcggtgtggatccgcaacccattattaatcaggtcgaagcaggctcgaagaaa
aagggatctaaggggacagcttctgtaccatcacctggttcttccaattctcaagactca
tttcctgctgctggatcaagcaacgcttccatggacggctatggaagttaccaaagtagt
tacgcaggcggtactcctggtggtccttcgtcagaatacacgcccccgccgccgaggcca
cccagtcaaagcagtgcaccctccgcccatcaagggatacaacaaggcagttaccaaaac
acgggttcgtatcagaactatccacaggaacagtacgttcgaccgcaaggaaacacgctg
tctcagcagagcgagtttaatcaaccgtattcacctagatcgcattatcctccgtacgtg
ccggatgtcgataggggttatccgggtagtaccatgccaccaaacaatgctaccggacaa
gacatgtataatagatatacaagcggtcagcagggtcccgccagctatcccacaggaacg
cctcccaacgcgcggaataacagttatccgtcggggccacaagctcatccggctactgtg
caacagcaaacggcaaccagccagccttcctcaccctcgcaaccgccagctgcaacgtca
tactcttgtcaacaggagtactaccgacaagaacaaagtgggtacggagcacccggtgga
actcaaatatatgccggaggcgcatcagctaacaagaatatgccgccgcctcctccgggt
cccagccaacctagacgtcatccagactttgccaaagaccaacagtatccccagtataat
cagcagcgaccagcgtatccaggatggccaaatacaaccaatcagtacaacagtagtagt
ggaaataacagggtgcagtacccgagccagcagacacaatcgccgtcgcagcaacagcaa
cagcagcagcagcagcagccacaaccagtgccgcaagttggctcagccgctccgcccgcc
tcggtcgcagttggtggtatgactagtagccaacaatgggtagccagtcagcagccgaac
aggtcttcgtcccaaccgcctctgaacactattgcgcacgcaccaccgccgtgggatcat
cgttatacgaatcaaccgtcccctttgtatccagcacctggaactcatcagaatcaactt
ggagtgaatcccatgatcagccaacagccgacgtcaaagagagaaatgacattccctcct
gacagcgtggaagcgatcacacctcttttgtataagcgacgaaaactggcgcgcgccgaa
gtggcaccagtggaagcttggcgcatcatgatggctttgcggtcgggcttgcttgccgag
agttgctgggccctcgacgtattgaacattttgttattcgacgactcttccgtaagttat
tttggattagcacatttacccggactactggacgttttgctggaacacttctcgcgctcc
ctgtccgacatgtttgaattgtgtgtgaacgatgacgatcgttactgtcaatccgcggat
ggtcccgaggtagacctcggcgcagtgacgcgcccgatcgattcggaggatcggaccaaa
ctactgtcgacatcaaattacacgtatctctcgcggagaggtcgccctgtgaagattgtt
ccacgggatgacgatttgttcgtcttggacactcgaagatcttgggatcatcaggaatgc
gagtcggagaccgaaccgtggcaggttgatgcaaatgcgacgaagtacatcgtcacgtgt
tttcaatccgagatgggctcagtaccttttgctcgcttgttgagggatgagaaaccaccg
ttgctgcagaaggaggtcgacagtaccgactcgaaggacgaggtcaaagctgatggcgtt
ggtggtgttcacgagacattagacttattcagcaaatccggcgatcttggtgacaagcag
tccggcaaagagggtggtgagcgcaagcagcagcagcagcaattggataagaagaaaaag
acgaaaacactgagcgacgtgctgtcgaggatcaagaaggagcccgtggaaatgaacgat
ctcacaagggaattattcgagaagaaaaacgacggttttaaaaaggactgtgacaacgag
acagcgaaagcaaacaacaatatgggcgagcatttaggaagcgacgtgtcgaagaatgac
gaggactcgctgccgacgcagaatggattgaatgactccgcagcgccgatagcagtgaca
acaggcaatatcggtaatttagacaagtccgaaatcaagacagaaacgacgacagacgag
caggagttgggaatgagagacgacaaggagggaccaagattaaagatacgagatccggca
ggaacgctgaagcgacggaggataagcgactacgaggacgagagctattccagagacgag
gcaagcctgtatctggttacggaaacgcaggacagcctggctcgccgatgcgtgtgcctg
tcgacgatcctaaggaatctcactttcatcccgggtaacgaggcagagtttgcaaagaac
gttacgtttctcagcctgctcggtaagctattgctgttgcatcacgagcacccggttcgg
gcgcagaaaacgcgcaactacgaccgtgaagaagacgcggattttgcggattcgtgtagt
agcctacaaggtgagagcgagtggtggtgggacttcctgcatcacgtgagagagaacgtt
ctcgtgatggccgccaacatatctggccatatggacttgagccagcatccggaggagata
tcgcggccggtactcgatggcctcctacactgggcggtttgcccggccgctcatggtcag
gatcccttcccaaccgttggcccgaactcctcgctgtcgcctcaacgactcgcgttggaa
gcgttgtgcaagttatgcgtgaccgagtgcaacgtcgatctggttgtggccacaccgccc
tactcccgattacagagactatgttctgtattgaccaggcttctatgccgcagcgaggag
caggtgctgcgcgagttcggcgttaatctgctgcactttctgtcggctgcagacagtggt
gtcgcgcgtactatcgccctgcagacaccgtgtgtcgcgttactcgtcgcgtttatagag
caggctgaaacaagcgcgcttggggttgcgaatcaacatggtttggcagccctacgcgac
aatcccgaatcgatgggcactagcctcgacatgctgcgacgcgcggccggtacgctactc
aaccttgccaggcatccggacaaccgaactctcctgctgcaacacgagtcccgcctgctc
gctctggtcatgagccagattctggatcagcaagttgcagcgatagtcgcgcgtgtattg
ttccagtgttctaggggcacgtaa
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integrated database retrieval system
