Ooceraea biroi (clonal raider ant): 105284565
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Entry
105284565 CDS
T05778
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105284565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105284565
03009 Ribosome biogenesis [BR:
obo03009
]
105284565
03036 Chromosome and associated proteins [BR:
obo03036
]
105284565
Enzymes [BR:
obo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
105284565
Messenger RNA biogenesis [BR:
obo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
105284565
Ribosome biogenesis [BR:
obo03009
]
Eukaryotic type
90S particles
RNase
105284565
Prokaryotic type
rRNA processing factors
105284565
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
105284565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
105284565
NCBI-ProteinID:
XP_011346498
LinkDB
All DBs
Position
6:complement(16185595..16191044)
Genome browser
AA seq
1308 aa
AA seq
DB search
MTDPSPINAGQSYYWNNDAAPQNMEYYPMPPEPSFPPPNYNQPPSYAPSCPYDVPPPHIS
DAKPADSVYHFASSTYQDSPASSHSDTSYQNERYFLPKPNIFPQGNQYYDGMDFTQSASK
PYNANWNRNSREEYHNNVNEWQTNNASTSWTSYQTTSNSWYDANATYSNERPYSPMQRYE
SSQKPKETEWKCNNRESLADHTEIVQRVSRQRSRSPSRSGESYKSRYDDHRDRYRQHSRE
RSSLKEYMHNSGHHDRRSLNKKHGSYTSRSQESYVSNRRKRSRSQDSRLTRDTTTPPSST
KRKSPTERELLLEKYRRNYCATSKDIERKLSELSAMGSEGILENEKKIWTRTAPADLYYT
RDESNSKIMRSTSKLIELCVTFKKLLIDRAAAARALQPPYEPPPRKTRARLCRHKSEACS
SSSSDDSDSSMDEDDRTMEELMAKKQHPQRLHPEMWFNDPGEMNDGPLCRCSAKSRRSGI
RHGIYAGEGAINKCDLDSNNADKLYHYRITISPPTNFLTKTPTIIKHDEHEFIFEGFSML
SHFPLVKLPTCKVIRFNIEYTILYIEEKLPENFTIQELDLFQTYLFKEILELVDFDLHAA
QNKSGCGQFHFMPRFVRDLADNGQEILSMNEVLNYLIKSSALLIDPEDLPRLVEMPQYKW
QDFADEVKGMVVTYPGKKPCSVRVDQLDRNQVDQSPGIAYPEIVHFGIRPPQLSYAGNAD
YQKAWRDYVKFRHLLANMSKPSFEDKRKLEAKENKLQELRTQSKMKRNVTVDVRSKGFYR
TGIMCDIVQHAMLIPVLVCHLRFHKSLDNLERTLKYEFKNRYLLQLALTHPSYRENFGTN
PDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGINTLINIMSRFGAKTETESSIAHNERLE
FLGDAVVEFLTSIHLFHMFPELEEGGLATYRAAIVQNQHLAVLAKKLNLDEYMLYAHGSD
LCHDLELRHAMANCFEALMGSLFLDGGIEVADRVFGETLFKSEDDLGKVWVNYPRHPLQE
QEPTGDRQWISSFELLEKLTKFEESIGIQFTHIRLLARAFTDRSIGYTNLTLGSNQRLEF
LGDTVLQLIVSEYLYKFFPEHHEGHLSLLRSSLVNNKTQAVVCDDLGMTQYALYGNPKAE
LKTKDRADLLEAFLGALYVDKGLKYCHVFCDVCFFPRLQDFIMNQDWNDPKSKLQQCCLT
LRTMDGGEPDIPVYKVIECKGPTNTRVYTVAVYFQGKRLAKASGHSIQEAEMNSAKEALE
KSHDLFPQLDHQKRVIAKSMKMQQWPIKQKSKGKFTKSNDRSDDSDSS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccgtcgccaataaacgcagggcagtcgtattattggaataatgatgcagct
ccgcaaaacatggaatattatccaatgcccccagagccaagttttccaccacctaattat
aatcaacctccgagttacgctccttcctgtccttatgatgtgccgcctcctcacatatcg
gacgccaagccagcggattcagtataccattttgcatcttcaacataccaggatagccca
gctagttcgcacagtgacacgtcttatcagaatgaacgatacttcttaccaaagccaaat
atatttccacaaggcaatcagtattatgatggaatggatttcacgcagtctgcaagtaaa
ccctataacgcgaattggaatagaaattcgagagaggaataccataataatgtcaacgag
tggcagactaataacgcttctacaagttggacatcgtatcaaactacatccaattcatgg
tatgatgcaaacgcaacatatagcaatgagagaccgtattcaccaatgcaaaggtatgaa
tcttcgcaaaaaccaaaggagaccgagtggaagtgtaataatcgggaaagcctagctgat
catacagagatcgtacagagggttagtagacagagatctagaagcccaagtagatcagga
gaatcgtataagtcacgatatgacgatcacagagataggtatcgtcagcacagtagggaa
aggtctagtctgaaagagtatatgcacaacagtgggcatcatgacaggaggtctttgaac
aagaaacatggaagttatacgtcacgttcacaagaatcgtacgtaagtaataggagaaag
agatcaagatcacaggattctcgtttgaccagggacacgacaacgccacccagcagtact
aagcgaaagagtcctacggagagagaactgcttttagagaaatacagacgtaattattgc
gcaacaagtaaggatatagaacggaagctaagcgagttatcagcaatgggctctgaaggt
atacttgaaaacgagaaaaagatatggacacgcacggcaccggcggatttgtattatacc
agggacgagagtaattcaaaaataatgagaagtacttctaagctaatagaattatgcgta
acttttaagaaattgttaattgacagagcagctgctgcaagagcattgcagccaccttat
gaaccacctccaaggaaaaccagggctcgcctttgccgccataaatctgaagcttgcagt
agctcttcatctgatgacagcgatagttctatggatgaggatgataggacaatggaagaa
ctgatggcaaagaaacagcatccacagagattgcatcctgaaatgtggtttaatgatcct
ggagagatgaatgatggtccattatgcagatgtagcgcaaagtcacggcgctcgggcata
agacacggaatttatgccggagagggtgcaataaacaaatgtgatttagattcgaataac
gcggataaattatatcactacagaataacgatcagcccgccgactaatttcttgactaag
acaccgacgattatcaaacacgacgagcatgaatttatatttgaaggcttctcgatgctc
tcccatttcccactagttaaattacccacatgtaaagttatacgatttaacatagagtac
acgattctttacatagaggaaaaattgccggaaaatttcacgatacaggagcttgatctt
ttccagacgtacttgttcaaagagattttggaactcgtagactttgacttgcacgcggca
caaaacaaatccggctgtgggcaattccattttatgccgagattcgtacgcgatttggcc
gacaatggtcaagagattttatcgatgaacgaggtcttgaattatctgataaagagcagc
gcccttctaatagatccagaggacttgccgagattagtggagatgccacagtataagtgg
caagatttcgcggatgaagtaaagggaatggtcgttacttatcctgggaaaaaaccgtgc
agcgttcgcgttgaccagctggacagaaatcaagtggatcaatcgcctggcatcgcttat
cccgaaatagtacacttcggtatccgtccaccgcaactcagctacgcgggcaatgcagat
tatcaaaaggcatggagagattacgtaaagtttcgacatctactcgcgaacatgtcaaaa
ccatcctttgaagacaaaagaaaattggaggcgaaggaaaacaaattacaggagttacga
acgcagagcaaaatgaagcgcaatgtcacggtggacgttaggtccaagggattttacaga
accggcattatgtgcgacatcgtgcagcacgcgatgctgataccggtactcgtgtgccac
ctgagattccacaagtccttggacaacttggagcgcacgttgaagtacgaattcaagaac
cggtatctgctccagctggctctcacgcatcccagttaccgcgagaacttcggcaccaat
ccggatcacgcacggaactcgctgacaaattgcggtataaggcagcccgagtacggtgac
cgcaggattcactacatgaacacgcggaaacgcggtatcaacacgctcataaacataatg
tccagattcggcgcgaaaacggaaaccgaatcgtcgatagcgcacaatgagcgactggaa
ttcctgggtgacgcggtcgtcgagtttctcacgtccattcacctgttccacatgtttccg
gagttggaggagggtggtctggccacgtacagggcagcgatcgtgcagaatcagcacctg
gctgtgttggcgaagaaattgaatctggacgagtacatgctctatgctcacggcagtgat
ctctgccacgatttggaactgaggcacgcgatggcgaactgcttcgaggcactaatgggc
tcgctgttcctcgacggtggaatagaagttgccgacagggtattcggcgagacgctcttc
aaaagcgaggacgatcttggcaaagtctgggttaattatccgaggcatcccttgcaggag
caggaaccgacgggagatagacagtggatctccagcttcgagttgctagagaaattgacc
aaatttgaagaatcgatcggaatacaattcactcatattcgcctgctcgctagagcattc
acggatcgtagtataggatacacgaatctgacattgggatctaatcaacggctagagttc
ttaggagacaccgtattgcagcttattgtttccgagtatctctacaagtttttcccggaa
caccatgagggacatttatcattgttgcggagctcccttgtaaataacaaaacccaggca
gtcgtttgtgacgatttgggtatgactcagtacgcactttacgggaatccgaaagccgaa
ttgaaaacgaaggatagggcagacttactggaggctttccttggcgcgctttacgtcgat
aagggtttaaagtattgccacgtcttctgtgacgtgtgctttttccctcgtttgcaagat
ttcatcatgaatcaggattggaatgatccaaagagcaaactgcaacaatgttgcttaact
ttgagaactatggatggcggagaaccggacattcctgtatacaaagtcattgaatgtaaa
ggaccgactaacacaagagtatatacggtcgccgtatatttccaaggaaaacgactagct
aaggcatcaggacatagtatccaagaggcggagatgaattctgccaaggaagctttagag
aaatctcatgacttattcccacaactggatcatcaaaaacgtgtgatagcaaaaagtatg
aaaatgcagcaatggccgatcaagcagaaatcaaaaggaaaatttacaaagtccaacgat
agatctgatgattctgattccagctaa
DBGET
integrated database retrieval system
