Ooceraea biroi (clonal raider ant): 105284662
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Entry
105284662 CDS
T05778
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105284662
09123 Folding, sorting and degradation
03018 RNA degradation
105284662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105284662
03041 Spliceosome [BR:
obo03041
]
105284662
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105284662
mRNA degradation factors
5'-3' decay
Lsm complex
105284662
Spliceosome [BR:
obo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105284662
Complex C
U2 snRNP components
105284662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105284662
NCBI-ProteinID:
XP_011346635
LinkDB
All DBs
Position
9:9415115..9416106
Genome browser
AA seq
96 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGILHSVDQYLNIKLTDITVMEQEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDTQLLADAARREAMNAQAR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctattccttctttaagtccttggttggcaaggacgtggtcgtcgagttgaag
aatgatcttagcatttgcggcatattacactccgtcgaccagtacctgaacataaaacta
actgatatcactgtaatggaacaggagaaatatcctcacatgttatcagtaaagaactgc
tttattcgtgggtccgtggtacgatacgtgcagcttccagtggacgaagtagatacacag
ctcttggcggatgcagcacgtagagaagcaatgaacgctcaagcgagatag
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