Ooceraea biroi (clonal raider ant): 105284665
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Entry
105284665 CDS
T05778
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04517
IgSF CAM signaling
obo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105284665
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105284665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
obo04812
]
105284665
Cytoskeleton proteins [BR:
obo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105284665
Intermediate filaments
Intermediate filament-binding proteins
105284665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
Motif
Other DBs
NCBI-GeneID:
105284665
NCBI-ProteinID:
XP_011346639
LinkDB
All DBs
Position
9:9425582..9463474
Genome browser
AA seq
2400 aa
AA seq
DB search
MTTDISVVRGGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGERELVQKKTFQKWV
NSHLVRCSCRISDLYADLRDGKMLLRLLEILSGERLPRPTKGKMRIHCLENVDKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRLI
HEYESLTSELLRWIEATIEALGDRRFANSLVGVQSQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SQELEAENYHDIERINARKDNVLRLWNYLLELLRARRMRLELSLQLQQNFQEMLYILDSM
EEIKMRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEHGEGYRPC
DPGIIVERVQQLENAYAELVRLAIERRTRLEESRKLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQLMSVAAIGDDLIRQKHFGADRIQERLQEILA
MWNHLLDLAAFRRKRLVEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYAATIDQLHQQASTLGEQDAKSSEVLERLTSIDNRYKELLELAKVRKQR
LLDALSLYKVFSEADGVEQWIGEKNRMLDTMVPAKDIEDVEIMKHRYNGFEKEMNSNASR
VAVVNQLARQLLHVEHPNSEQIIARQNELNQKWAELREKAESKREELNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDSLEMDLTGVMTLQRRLSSMERDLAAIQAKLDALEKEAEVIQK
EHPEEAAVIRERVTQIHLIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQAWLTKTQTD
VASEDTPTSLADAERLLTQHQNIKEEIDNYTDDYQRMMEYGERLTAEASDGDTQYMFLRE
RLNALKMGWEELHQMWVNRQNLLSNSLNLQVFDRDARQAEVLLSQQEHILAKDETPANFE
QAEHMIKRHEAFMTTMDANDEKINSVVQFAGRLVDEGHFAADKVKKKADSINERRRVNRE
KANQLMEKLKDQLQLQMFLQDCEELGEWVQEKHITAQDETYRSAKTIHSKWTRHQAFEAE
IASNKDRLQQLQQAADELIQQKPDLAEIIKPKMTELADQFVELETTTHDKGERLFDANRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKAKQVTELDKQ
AEHLQRTVPDDKMEEIKCKKEKVAQRFAQLKAPLTDRQRHLEKKKEAFQFRRDVEDEKLW
IAEKMPQATSTEYGNSLFNVHMLKKKNQSLRTEIENHEPRINLVCNNGQKLIDEGHEDSP
EFRKLISELTEKWRELKDAVDDRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAVEDYADTIRQLGETARQLINDQHPLADQIAVKQSQVDKLYA
GLKDLAGERRAKLDEALQLFMLNREVDDLEKWIQERELVAGSHELGQDYDHVTLLWERFK
EFARDTEAIGSERVEAVNGIADSLIATGHSDAATIAEWKDGLNEVWQDLLELIETRTQML
VASRELHKFFHDCKDVLSRILEKQNAMSDELGRDAGSVSALQRKHGNFVQDLSTLQSQVT
QIEEESAKLQASYAGDKAQEITNREAEVVAAWNNLQSLCEGRRAKLEDTGDLYRFLNMVR
TLMIWMDDVVRQMNTSEKPRDVAGVELLMNNHQSLKAEIDAREDNLMACINLGKDLLARN
HYASVQIKEKLAALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM
SQELGHTIDEVENLIKKHEAFEKSAAAQEERFSALHRLTTFELKELKRREQEREEEERRK
KEEAAAAEAARLAKATPVTSPDEPPSERAETDGASGVAGEDEGHVAHRKASTRTPQPQDK
PKEVHAQKPRQLSFREGGGTTPPVTPTSAKPPHGPRTPTTPKGSSESGALRRKERSRSKS
PFRSFRWRKSAKSPSLDRSGVSDDEHSIPEQRSPSDDEFEGVLQRKHEWESTTKKASNRS
WDKVYMVVRGQSLCVYKDQKSYKASPDQPYKGETPLDLRGATITVASDYTKKKHVFRVKS
QSGSDFLFQAKDDAEMNDWVSVLNQAAQGTSGAGTSRAHTLPAPTQAETKRRSFFTLKKN
NT seq
7203 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtggtgcgcgggggttgggatcccacgctgcagcaggagatt
gtcgacgagtacgaatacgacggaggaaactcgagttcaagacttttcgagcgctcgcgt
atcaaagcgttagcaggtgagcgtgaattagtgcaaaagaagaccttccaaaaatgggta
aactctcacttggtccgatgttcgtgccgaatcagcgatctctacgccgatctacgggac
ggcaagatgctgctacgactgctggagatcttgtcgggtgagcgtttaccgcgacccact
aagggcaagatgcgcatccactgcctcgagaatgtggacaaggcgctgcagttccttcgc
gagcagcgcgtgcacctggagaacatgggttcccacgatatcgtggacggaaacccacgg
ctcagtctgggcctcatctggacgatcatcttgcgattccaaattcaagatatcacgatc
gaggagacggacaatcaggagacgaaatcagcgaaagacgcgttgctgctctggtgccag
atgaagacggctggctaccataacgtaaacgtgcggaattttacgacctcctggcgcgac
gggctcgccttcaatgcaatcatccacaagcaccgccccgatctgatccaattcgagaaa
ctgtccaagtcgaacgcgatctataatttgaacaatgcattcaacgttgcagaggacaaa
ctcggtctcacaaaacttctggatgccgaggacatctttgtcgatcatccggatgagaaa
tccatcattacatacgtcgtcacatactaccattacttctccaagatgaaacaggaaacc
gtgcagggcaagagaatcggtaaggtagtcggcattgcaatggagaacgatcgtttgata
catgaatacgagagcctgacgagcgagttgttgcgctggatcgaggctacgatcgaggca
ctgggcgatcgcaggttcgcgaactccttggtcggcgtgcaatcgcagctgtcgcagttc
tctaattatcgcacggtggagaaaccgcccaagttcgtggagaagggtaatctcgaagtg
ttgctgttcaccctgcaatcgaagatgcgtgcgaacaatcaaaagccgtacacgcccaag
gagggtaagatgatatccgacatcaacaaggcctgggagagactggaaaaagcggaacac
gaacgagaactggcactgcgcgaggaactgattcggcaggagaagctggaacaactggcc
gccagattcaatcggaaggcgagcatgcgcgagacgtggctgtcggagaatcagcgtctg
gtatctcaggacaacttcggttttgatctagctgcggttgaagctgctgccaagaagcac
gaagccatagagactgacatattcgcgtatgaggagcgtgtgcaggctgtaatggcggtc
tcgcaggagctggaggccgagaattatcacgatatcgagcgtatcaatgcgcgcaaggac
aacgtgctgcgactgtggaattacctcttggaactcttgcgggcacggcggatgcgactg
gagttgtcattgcagctgcagcaaaacttccaagagatgctgtacattctcgatagcatg
gaagagatcaagatgcgtttgttgacggatgattacggcaaacacctgatgggcgtggag
gatctgctccagaaacattctctcgtcgaggcggatattaacgtgctcggcgagagagtc
aaggccgtcgtacaacagagccagagattcctagagcatggagaaggctatcgaccgtgt
gatccaggcatcattgtcgaacgcgttcaacaattggagaacgcgtacgccgagttggtc
cggctagcgatcgagcgtcgtaccaggctcgaggagtctcggaagctctggcaattctat
tgggatatggccgacgaggagaattggataaaggagaaggagcagatcgtctccacgggc
gatatcggtcacgatctgactaccatcaacttgctgttgtccaagcataaagcactagag
aatgagatacagtcgcacgaaccgcagttgatgtcggtcgccgcaatcggcgacgatctg
attcgacagaaacatttcggtgcggatcgcatccaggagcgcttgcaggagatcctggcc
atgtggaatcatctgttagatctggcagcattcaggaggaagcggctcgtagaagccgtc
gactatcatcagttgttcgcggacgccgacgatatagatatctggatgttggatactttg
cgactcgtctcgtccgaggacgtcggcagggacgaggcgaacgtgcaatcattgctgaag
aagcacaaggacgtgacggatgagctcaagaattacgccgcgaccattgatcagcttcat
caacaggcatctacattgggcgaacaggacgctaaatcatcggaggtcttggaaagatta
acctcgatcgacaacaggtataaagagcttctcgagctggcgaaagtacgcaagcaaagg
ctgctggacgccttgtcgttgtacaaggtattcagtgaagcggacggagttgaacaatgg
atcggtgagaagaacagaatgctggataccatggtgcccgctaaagacatcgaggatgtg
gaaattatgaagcaccgctacaacggcttcgagaaggagatgaattcgaacgcgtctcgc
gtagctgtggtgaatcaattggccaggcaactattgcatgtcgaacatccgaactcggag
cagataatcgcacggcagaacgagctcaatcagaaatgggccgagctgcgcgaaaaggcg
gagagcaagcgcgaggagttgaactccgcacacggtgtgcagacattccatatcgagtgt
cgcgagactgtttcgtggatcgaggacaagaaacgtattctgcagcaaaccgacagcctg
gagatggatctgactggcgtgatgacattgcagcgcagactgagcagcatggaacgcgac
ttggcggctattcaggccaaactggatgcgttggaaaaggaagcggaggtgatacagaaa
gaacaccctgaggaggcagcggtaatacgtgagagggtcacgcagatccatctaatctgg
gagcagctgacgcagatgctgaaggagcgcgatgccaagctcgaagaggccggcgatctt
caccggttcttgcgcgacctcgatcacttccaggcgtggctgacgaagacgcaaactgac
gttgcaagtgaggatacgccaaccagcctcgctgatgccgagagactacttacgcagcat
cagaacatcaaggaagagatcgataattacacggacgactaccaaaggatgatggaatac
ggtgaacgattgacggcagaggccagtgacggcgatacgcaatacatgttcttgcgagag
agattaaacgcgctcaagatgggctgggaggaattgcatcagatgtgggtaaatcgtcag
aatttactgtccaattctctcaatctacaagtattcgaccgcgacgcgcgccaagcggag
gtcttgctatctcaacaagaacacattctggccaaggacgaaacaccggcgaacttcgag
caggcggaacacatgatcaagcgtcacgaggctttcatgaccactatggatgccaacgac
gagaagatcaactcggtcgtgcagttcgccggacgtttggttgatgaagggcactttgca
gccgacaaagtgaagaagaaggccgacagcatcaacgagcgtcgtcgcgtgaatcgcgag
aaggccaatcagcttatggagaaactcaaggatcagctgcagttacagatgttcttgcag
gattgcgaggagcttggcgagtgggtgcaggagaaacatatcactgcgcaggacgagacg
tacagaagtgccaagactattcacagcaagtggacgcgtcatcaggcgttcgaggcggag
atcgcgagcaacaaggatcgcttgcagcagttgcaacaggcagctgacgagttgatccaa
cagaaaccggatctggcggagatcatcaagccaaaaatgaccgagctggcagatcagttt
gtagaactcgagaccacgactcacgacaaaggtgagcgattattcgacgcaaaccgcgaa
gttttgatacaccagacctgcgacgacatcgattcatggatgaacgaattagagaaacag
atagagagcaccgacactggctccgatctggcatctgtgaatatactgatgcagaagcaa
cagatgatagagacgcaaatggcggtgaaggcaaagcaggtcaccgagctcgacaagcaa
gcagaacacttgcagcgtaccgtacccgacgacaagatggaggagatcaagtgcaagaag
gagaaagtcgcccagagattcgcccaattaaaggcgccgctgactgatcggcaacggcat
cttgagaagaagaaagaggcgttccagttccgacgcgacgtcgaggacgagaaactgtgg
atcgccgagaaaatgccgcaggcgaccagtacagagtacggcaactcgctattcaacgta
cacatgctgaaaaagaagaatcaatcgctgcgcacagagatcgagaatcacgagccaaga
atcaatctggtatgcaacaacggccagaaactgatcgacgagggacacgaagatagtccc
gagttccgcaaattgatatccgagctgacggagaagtggcgcgagctgaaggatgcggtg
gatgaccgaaacaagcacctgttacagaacgagaaggcgcagcagtacttcttcgacgcc
accgaggcggaatcatggatgagtgagcaggaattgtacatgatggtagaggatcgcggc
aaagacgagatctctgcccagaatctgatgaagaaacacgaatcactggagcacgcggtc
gaggactacgcagacacaattcgccagctcggtgagaccgccaggcagctcataaatgat
cagcacccactagctgatcaaatcgccgtgaagcagtcgcaggtggataaactgtacgcc
ggcttgaaggacctggcaggcgagcgacgcgccaagttggacgaggcgcttcagctattt
atgctgaatcgcgaggtagacgatctggaaaagtggatccaggagagagaattggtcgcc
ggcagccacgagctcggtcaagactacgatcatgtaactttgctctgggagagattcaag
gaattcgcacgcgacaccgaggcgattggttccgagcgcgtggaagctgtaaacggcatc
gccgattctctgattgccactggacattcggacgcggcaaccattgccgaatggaaagat
ggtttgaacgaggtctggcaggatctgctcgaactcatcgagacgcgcacgcagatgctg
gtggcgagccgcgagctgcacaaattcttccacgattgtaaggacgttcttagcaggatc
ctcgagaagcagaacgccatgtcggacgaactgggtcgcgacgccggttcggtatcagcc
ctccagcgcaagcatggcaatttcgtccaagacctgtccacgttgcaaagccaagtgacg
caaatcgaggaggagtccgcaaaattgcaggcgagctacgccggcgacaaggcgcaagag
atcacgaatcgcgaggctgaggtcgtagcggcatggaacaatttgcagtccctgtgcgaa
ggcaggcgagccaaactggaggataccggcgacctgtacagattcctcaacatggtcagg
accctgatgatctggatggatgacgttgtgcgtcagatgaacacgtccgagaagccgcgc
gacgttgccggcgtcgaattgctcatgaataatcatcagagcttgaaagcggagatcgat
gccagggaggataatctgatggcgtgcatcaatctcgggaaggacttgctggccagaaat
cattatgctagcgtgcagatcaaggagaaattggcggcgttgactgatcacaggaatgcg
ttattacaccggtgggaggagcgctgggaaaatttacaactcattttggaggtttaccaa
ttcgcccgagatgcggcagtcgctgaagcatggctaatcgctcaagaaccatatctgatg
agccaggaactcggtcatactatcgacgaagtcgaaaacttgatcaagaaacacgaggct
ttcgaaaaatcggcagctgcgcaggaggaaaggtttagtgccttgcaccgacttactact
ttcgaactaaaagaattaaaacgacgagagcaagaaagagaagaagaagaaagacgcaag
aaggaagaggcggcagccgcggaggctgcacgtctggccaaggcaacgcccgttacaagc
ccagacgagccacccagtgaaagagctgagaccgacggagcgagcggagttgccggagaa
gatgaaggacacgtggcacatcgtaaggcttccacacgtacaccacagcctcaagacaag
cccaaggaagtgcatgcacaaaagcctaggcaactgtctttccgggagggaggagggacc
actccgcctgttacgccaacctctgccaaaccgccgcatggtccccgcacaccgacaacc
ccgaaaggcagctccgagtctggcgctttaaggcgtaaggaacgcagccgcagcaagtcg
ccgttccgcagcttccgctggaggaagtccgccaagtcgccgagtttagatcgcagtggc
gtgagtgacgatgagcacagcatccccgaacaacgaagtccgagcgacgacgagttcgag
ggggtgttgcagcggaagcacgagtgggagagtacgacgaagaaagcgtccaaccgctcc
tgggacaaggtgtacatggtcgtgcgcgggcagagcttgtgtgtatataaggaccagaag
tcgtacaaagcgtcgcccgatcagccgtacaaaggagaaactccccttgatctacgaggc
gcgactatcaccgtagcgagtgattacactaagaagaaacatgtcttccgagtcaagtcg
caaagcggatccgacttcctgttccaggccaaagacgatgcggagatgaacgactgggtg
tccgtgttgaatcaagcggcgcagggaacatcaggcgcgggcacgtccagggctcacacc
ctgcccgcaccgacacaagccgagaccaagcggcgtagcttcttcactctcaagaagaac
taa
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integrated database retrieval system