Ooceraea biroi (clonal raider ant): 105284747
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Entry
105284747 CDS
T05778
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase Rpap2 isoform X2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obo01009
]
105284747
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105284747
Enzymes [BR:
obo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105284747
Protein phosphatases and associated proteins [BR:
obo01009
]
HAD phosphatases
Fcp/Scp phosphatases
105284747
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105284747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
105284747
NCBI-ProteinID:
XP_011346787
LinkDB
All DBs
Position
1:complement(11168543..11171369)
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AA seq
649 aa
AA seq
DB search
MSTAKKFLNEKRKLKNMSKVELQQVIIMKKQCDAKALAIVEQLLEPDVNSDWLLQNLRFL
KKCHMEDVIEERTILKLCGYVLCSKPLTVIIQQQYHISTRSNKVYDVSKRKKFCSSSCYG
ASNYLLEQMLDSPLWLRDKEDISVFKILSRDINRKFTQCGEEVNILSNNHSQGITDNNKN
KTDNNKEYNTIEQTKEDVLCDTSSSFKEEDTYSSCSVDDVNAEKEDVHVKEISINTESQE
LLGCEINPSKLHKNPINEDCSLQESIKENHNDDTQKLNIKPEVERQSEEILHSHEHDTDT
ENTNFECENVITCNKDNKTLQSQPDGTDNKTDGIKTLQPQLDRICSSSTIISSDSRTKHR
KNRDADKSKKTKKFKQKEANNVVATTDVYCNLIARVEQSVREWVTENTLCLLLGKEDEKN
QLLESLIQQERYQKLCKKLDRLQLEDKMRDHTNLERDTLKPLPVSSVLQEEGKKIELKVR
AFYAGETTFPLSGDSSKESENKDDNGESVLPLTEKCAPNVIRRRIFLDKLNTILPDLLRT
LANNANVSSMMQYTHNNERYFLIKILVSTFNLSAGNIIFKTGEWTLVGLIVIKMLSFIDV
KLQSLLHSKQASMYTSMMLTLYKLDGNYLDRFMMEVTNSINASELNDRN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggctaaaaagtttttaaacgaaaaacgaaaattaaagaatatgagtaaggtg
gaattgcagcaagtaataattatgaagaaacaatgtgacgcgaaagcccttgcgatagtc
gagcaactcttggaaccagatgtaaattcggattggcttctgcaaaatctgagattttta
aaaaaatgtcacatggaggacgtaatagaggaaagaacgatactgaagttatgtggatat
gttctctgctcaaaaccattaaccgtaattatccaacaacagtatcacatatcgacacgc
agcaataaggtatacgatgtcagtaaacggaagaaattctgtagttcgtcatgttacggg
gcatccaattatcttcttgaacaaatgctggacagcccattgtggctgagagataaggag
gatatatcagttttcaaaattttatcacgtgatataaatcgtaaattcactcaatgtgga
gaggaagttaatattcttagtaataaccactcgcaaggtataactgataataacaaaaat
aaaactgataataacaaagaatataacacgatcgagcaaacgaaagaagatgtattgtgt
gatacttcatcaagcttcaaagaagaagatacatatagttcttgttcagtagatgatgtg
aatgctgagaaagaagatgtacacgtgaaagagatttccataaatactgagtcacaagaa
ttactcggctgtgaaataaatccatcgaaactacataaaaatccgataaacgaagattgc
agtttacaggaatccataaaagaaaatcacaatgatgatacgcaaaagttaaatataaaa
ccagaagtagaaagacaatccgaagagattctacattctcatgagcacgacacggataca
gaaaatacaaattttgaatgtgaaaatgtaatcacatgtaataaggataataaaactttg
cagtcccaaccggatggcacagataataaaactgatgggattaaaacattacagccccaa
ttggatagaatatgtagcagcagtactataatttcttcagattctcgcactaaacataga
aaaaacagggacgcggataaaagtaagaaaactaagaaattcaaacaaaaagaagcgaat
aatgtggtggcaacaactgatgtttactgcaatcttatagcacgtgtcgaacaaagtgtt
agagaatgggtgacagagaacacgctttgcctcttactaggcaaggaagatgagaagaat
cagttattagaaagccttatacagcaagaaagatatcagaaattgtgtaagaaactggat
agattacaattggaagataagatgagagatcacaccaacctggagagagatactctcaaa
cctttacctgtttcctctgtacttcaagaggaagggaagaaaatcgaattgaaggtgcgt
gcattctatgcaggggagacaacatttccattatccggagatagcagtaaggaatcggag
aataaagatgacaatggtgaatccgtattaccactaacagagaaatgcgcgcccaatgta
attcggcgtcgaattttcttggataaacttaatacgatattgccggatttactgcgtact
ctcgcgaacaatgcgaacgtttcttcaatgatgcagtacactcacaataatgagaggtat
ttcctgatcaagattttggtcagcacttttaatctatctgctggaaacatcatttttaaa
actggagaatggacactcgtgggactcatcgtcatcaaaatgttgagctttatcgatgta
aaactgcaatcactactccactcgaaacaagcttcgatgtacacgtctatgatgctcaca
ttgtacaaattggatggcaattatttggacagatttatgatggaagtcacaaacagtata
aatgcatccgagttaaacgataggaattga
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