Ooceraea biroi (clonal raider ant): 105284982
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Entry
105284982 CDS
T05778
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105284982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105284982
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105284982
mRNA degradation factors
5'-3' decay
Decapping complex
105284982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
TOR1L1_C
Motif
Other DBs
NCBI-GeneID:
105284982
NCBI-ProteinID:
XP_026828878
LinkDB
All DBs
Position
10:complement(10645712..10654533)
Genome browser
AA seq
1128 aa
AA seq
DB search
MLISPRRRSYNGDERTGDLQLIYSFRATRRTTAFMPERDAASDMIKTGEGNLRHLHYQQT
VEFNGHEDQYSVELCSKNVTIVPSPGDHDHGSSKVKLKNIVDFTWDHHLYTGQLLAVHVS
GKYLAYGIKVGTGGGVVRVVYKELEHRALLRGMRGAIQDLAFAHVSNAILACIDYSGSLF
IHTIESTPSELLCSLVLQVDAEDASPTSHRVIWCPYIPEDDSSDGDEVSKLLVLTRGSKV
ELWSVATVASRFRSIEARDPAVKESGGMMEIDQHSGTIIEAMLSPDGTALATASTDGEVK
FFQVFLHGNSHNGQPQPRCLHQWRPHGGRPISCLFFLDDHKNYQPDVQFWRFAVTGCDNN
SELKVWSCELWTCLQTIKFAPNPSTGKMPVLKAGLDLSAGYLFLSDIYNKILYILSLSKD
KGEALACVSTVSEFLLPYPILSFGIVDAEQRKIRSTGESLEDLCSCEEIEESDEGLVISM
YLVQPKSLQECHIAFKPALQAGDNCLMDTLTHDLLDYSEDLPDLGNVNHNGISSENCEEE
RLSATIESTMNHNTSGLNLMTPDAFSSPAKKENNELESNPGSPELGSRNVLSSSPSLAQA
VQALNASDTPLAKAELEEQAPASCGSSPSREVREIMSLKADEEAEIDDKPEAKVNANENW
SNIPMVLLKDVSVHAMQEPKEFPDDTDNNVSRQKTKDEPKTTSLPTDDTGASWRVNNDAN
FLELNGKLKSILEVIQDQCQELKELRAEVARLQQESPAFTRVESALARMSQQQNATLEQT
LYGQMARQHEFLNTFETTVKEKIENTLPHAVEKTIEPLKRQMRLDANQMDELFQKNVTEL
VNSARVKDALALAAANAAKSALDVAFRDAFATFVLPGMEKVCQAMFRQIQETFIKGTREY
LQHVDVTIDKQCQRRNEQLRETLSTLVREELQTELNRIMTTIQDGTIRAVRDSVRENLSQ
QLTEISSARSRATTPAIPVTAVADAQARVMSLLHRGQLNAAFQQALSASDLGLVVLVCEK
TEPSRVFSCSGVQGQGSRSILQQPVILSLVQQLSADLGHRTELKHRWLEEAILNLDPNDP
VTREHMGTVLMTLQTQLAAFVASNPAHRSTRRMKMLAMAARALLNQHP
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgctgatatcgcctcgacgtcgtagctacaacggtgatgagcgcacgggtgatcttcaa
ttgatctattcgtttcgagcgacacgacgaacaacggcatttatgcctgagagagacgcg
gccagcgacatgattaagaccggggagggcaacctgaggcacctccactatcagcagaca
gtggaattcaacggccacgaggatcagtattcagtagaattatgtagcaaaaatgtgacc
attgttccctcccctggcgatcatgatcacggcagttcaaaggtgaaactaaaaaatatt
gttgactttacatgggatcatcatctttatactggtcagctgttagctgtgcatgtatcc
ggcaaatatttagcctatggtattaaagttggtaccggtggtggagtagttcgcgtcgtc
tacaaagaattggaacacagagcactcctgcgaggaatgcgtggtgctattcaagatctt
gcgtttgcccatgtttcaaacgcaattctcgcatgtatcgactattcaggatcacttttt
atacacacgatcgagtcaactccgtctgaattattgtgtagcttggtactgcaagtagat
gccgaagatgcttctccaactagtcacagagtaatctggtgcccttacataccagaggat
gactcttcagatggagacgaagtatcaaaattattagttctaacacgtggttccaaggtc
gaattgtggtcagttgcaacggttgcatcgagatttagatcaatagaggcaagagatccg
gctgttaaagaaagcggaggtatgatggaaattgatcagcattcgggaacgatcatcgaa
gcgatgctcagcccagatggtacggcactggcaacagctagtacagatggggaagtaaaa
ttctttcaggttttcctacacggtaattctcacaacggacaaccgcaacctcgttgctta
caccagtggaggcctcatggtggtcgacctatctcttgtctgtttttcttggatgatcat
aaaaactaccaacccgatgtccagttttggagattcgctgtgaccgggtgtgacaataat
tcggaattgaaggtatggtcatgtgaattatggacctgtttacaaacgatcaagtttgcc
ccgaatccttcgacgggcaagatgccagtgttgaaagcaggcctggatctcagtgctggg
tatctcttcctatcggacatatacaacaaaattttatacatactgagcctgtcgaaagac
aagggcgaggcattggcatgtgtaagcacggtgtcagaatttcttctgccatatccaatt
ttgagtttcggtatcgtcgacgctgaacaacgaaagatacgctcgaccggcgaatctctg
gaagatctctgctcgtgcgaggagatcgaggagagcgacgagggtctcgtcatctccatg
tatctagtccaaccgaagtcgttgcaggaatgccacattgctttcaaaccggcattgcaa
gcgggtgataattgtctcatggacacgcttactcacgatttgctggattattcggaggat
ttaccagacctgggaaacgtcaatcataacggtatttccagtgagaattgcgaagaggaa
cgtctgtctgccacaatcgagtcgaccatgaatcacaataccagcggtttaaacctcatg
actcccgatgcgtttagttctcccgcgaaaaaggaaaacaatgaattggaatctaatccc
ggcagtccggaattgggttccagaaacgttttgtccagcagtccctctctcgcacaagcg
gtacaagctctgaacgcgtctgatacgccactggcaaaagccgagctggaagagcaagct
cccgccagctgtggcagcagtccgtcgagagaagtgagagaaatcatgtcacttaaggcg
gacgaggaagctgagattgacgacaagccggaagcgaaagtgaacgccaacgagaactgg
tcgaatattccgatggttttgctcaaagatgtcagcgtgcacgcgatgcaagagccaaag
gagtttcccgatgacaccgataataacgtatcgaggcagaagacgaaggacgagccgaag
acgacgtcccttccgaccgacgataccggcgcgtcatggcgcgtgaataatgacgccaat
ttcctcgaattgaacggcaaattgaaatctattttagaggtaatccaagatcagtgtcaa
gagctaaaggaattgcgcgcggaggtggctaggttgcagcaagagtcaccggcgtttacg
cgagtagaatccgcgttggcaagaatgtcgcagcagcagaatgcgactctggagcaaacc
ttgtacgggcaaatggctcgccagcatgaattcctaaacacgttcgagacgacggtaaag
gagaagatcgagaataccttaccgcacgcagtcgagaaaaccatagagcctttgaagcgt
cagatgagattggacgcaaatcaaatggacgaactcttccaaaagaatgtgactgaactg
gtaaatagcgcgcgtgtaaaggacgccttagccctggcagctgcgaacgcagctaaatca
gccctggatgttgcattcagagatgcgtttgcgactttcgttttacctggcatggagaag
gtttgtcaagccatgtttagacagatccaggagacttttattaaaggtactcgcgaatat
ctgcaacacgtcgacgttaccatcgataaacagtgtcaacggcgtaatgagcaattaaga
gagacgctatcaacgttagtacgcgaggaattacagactgaattaaatagaattatgaca
acaattcaagacggcaccattcgagcagttcgtgattccgtacgggagaatctgagtcag
cagcttacagagatttctagtgcgcgctcaagagcaacaacacccgccataccggtcact
gcggtagccgatgctcaggcacgtgtcatgtccctccttcacagaggacaactgaatgcc
gctttccaacaagctctgagtgcaagtgacttgggattggtagtattagtgtgcgagaaa
acggagccttcgagagtattttcgtgttcaggcgtgcagggccaaggttcgagatccata
ttacaacaacccgtgattctctcactcgtgcagcagctgtccgccgatttaggacaccgt
acggaattgaagcacaggtggttggaagaagcaatattgaatctagatccgaatgatcct
gtgacacgtgaacacatgggcacagtgctaatgactctacaaactcaattagctgcgttc
gtagcgagcaatccggcgcatcggtcgacgcgccggatgaaaatgcttgccatggctgca
cgtgcattattaaaccagcatccttga
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