KEGG   Ooceraea biroi (clonal raider ant): 105284999
Entry
105284999         CDS       T05778                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03030  DNA replication
obo03410  Base excision repair
obo03420  Nucleotide excision repair
obo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105284999
   03410 Base excision repair
    105284999
   03420 Nucleotide excision repair
    105284999
   03430 Mismatch repair
    105284999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obo03032]
    105284999
   03036 Chromosome and associated proteins [BR:obo03036]
    105284999
   03400 DNA repair and recombination proteins [BR:obo03400]
    105284999
DNA replication proteins [BR:obo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105284999
  DNA Replication Termination Factors
   ELG1-RFC complex
    105284999
Chromosome and associated proteins [BR:obo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105284999
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105284999
  Check point factors
   HRAD17(Rad24)-RFC complex
    105284999
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_16 AAA_14 RuvB_N AAA_11 DUF815 AAA_5 AAA_19 ResIII AAA_24 DEAD AAA_7 AAA_30 AAA_assoc_2 RCF1-5-like_lid PhoH AAA_13 ATPase_2 Mg_chelatase TIP49 bpMoxR nSTAND3 FtsK_SpoIIIE IstB_IS21
Other DBs
NCBI-GeneID: 105284999
NCBI-ProteinID: XP_011347208
LinkDB
Position
10:10456645..10458476
AA seq 328 aa
MTSSDEQLVNLPWVEKYRPKSLDELISHETIIKTINKFIDENQLPHLLLYGPPGTGKTST
ILACARKLYSPAQFNSMVLELNASDDRGIGIVRGKILSFASTGTMYKSAFKLIILDEADA
MTLDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFLPLAAEQIMPRLNHV
IEAENLKVTDDGKEALMTLSGGDMRKVISVLQSTWFAYGVVNGENVYNCVGHPLPSDIHN
IVNWLLNEPYDICYKKIQELKLNKGLALQDILTEIHLCIIKIDFPNSILINLLCKMADIE
KRLASGCRDAIQVNSLISAFYKVRDIET
NT seq 987 nt   +upstreamnt  +downstreamnt
atgacgtccagtgacgaacaacttgtaaatttaccatgggtcgagaaatatcgtccgaag
agtttggatgagcttatctcccacgagacaataataaagacaataaacaaattcattgat
gagaatcagttgccacaccttcttctttatggaccacctggaacaggaaagaccagcact
atattggcgtgtgctcgtaaactttactctccagctcaattcaattcgatggtgcttgaa
ttgaatgcttctgatgacagaggtataggtatcgtacgaggtaaaatcttgagttttgcc
agtacaggcaccatgtataagtcagcattcaaattaatcattttggatgaagcagatgcc
atgacacttgatgcccaaaatgcgcttagaagaattattgagaagtacacagataatgta
cgcttttgcattatatgcaactatctcagcaagatcatcccagcattgcagtcgcgttgt
acgagatttagattcttgcctcttgcagcggagcaaataatgccgaggttaaatcatgtc
attgaagcagaaaatttaaaagttacggatgatgggaaggaagcattaatgacattgagc
ggtggtgacatgaggaaagtaataagtgtacttcagagtacatggtttgcttacggtgtg
gtaaatggagagaatgtgtataattgtgttggccatccgttaccgagtgacatacacaat
attgtaaactggctgctaaatgaaccttacgacatatgctacaagaaaattcaagaacta
aaactgaacaaaggacttgcgttgcaagatatattgacagaaattcatttgtgcattatc
aaaatcgattttcccaactcgatactcatcaatttactatgtaagatggcagacatagag
aaaagactggcttctggatgtcgtgacgctatccaagtaaattcacttatatctgcattt
tacaaagtccgtgatattgaaacgtga

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