Ooceraea biroi (clonal raider ant): 105285066
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Entry
105285066 CDS
T05778
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
105285066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
obo04040
]
105285066
Ion channels [BR:
obo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105285066
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
PKD_channel
Ank_4
Ank_KRIT1
CxC5
Motif
Other DBs
NCBI-GeneID:
105285066
NCBI-ProteinID:
XP_011347315
LinkDB
All DBs
Position
12:3685421..3695819
Genome browser
AA seq
1142 aa
AA seq
DB search
MNPSESQQNLLSNEVRQPSVQSLQSPVDYVLGPVEKHFLLSAERGDCATVRRLIEENKDH
PDILNINCVDPLNRSALIAAIENENMELIKLLLELGIEVKDALLHAIKEEYVEAVEVLLE
WEEKIHKQGQPYSWEAVDGSSNFTADITPLTLAAHKNNYEILKLLLDRGATLPTPHDARC
GCDECVTSSEQDSLRHSQSRLNAYRALTSSSLIALSSRDPLLTAFELSWELRRLSKMEQE
LRAEYIEMRELTQQFATSLLDHVRTSYELEIMLNYNPSGDNWDPGERQTLDRLKLAIKYK
QKQFVSHPNVQQLLAAIWYDGLPGFRRKSMFAQLLEVAKLGAMFPVYSTIYMMAPTSQMG
LFMKKPFVKFICHSASYAFFLMLLGMASQRIEYLLIELFGNEWMREILAGWEKRERGCIP
GFVETGVVIYVISLISAEIKSLWADGLLEYVSDLWNIVDFIQNTFYVIWISLRITAWWIV
QKEYWSGLDPWYPRDQWHAFDPMLLSEGAFAAGMIFSFLKLVHIFSVNPHLGPLQISLGR
MIIDIIKFFFIYTLVLFAFGCGMNQLMWYYADLEKRKCYHASDELPDYDNQEKACFIWRR
FANLFETSQSLFWASFGMIDLMSFDLTGIKSFTRFWALLMFGSYSVINVIVLLNMLIAMM
SNSYQIISERSDTEWKFARSHLWMSYFEDGDTVPPPFNVIPTNKTFEKLIKCGKTSRSTR
SFIKKSREKAQSRHDTVVRLLIRRYVMAEQRKRDEFGITEDDVMEIRQDISTFRYELIDI
LKKNGMRTPSLDKDDTTISGKKGRVMERRLQKDFQIGIVEGIVQAIIQSEKEPKDVFSQI
AKAIGHKGSITGKKDWNAMVRQSSVAVDPIGSTNEAVQRQNRRSLRRHLRHQPDSDLASL
DPKRLVEYNPNLSEVTPATRIAYAKFIISKRKLNEQADESASGPSQETPEQNGKAPRRSS
KVMIAETATDTVPRQSPVESTKKSSLKSTSVDKSSEKGLDVKATEIRSPSPIPEDPVGEE
AGKPSTSSAISGREKKADGKDESKKEDMQEQRGGEESGEASEKDKSEEQKREGRVEDKDR
PQQSESTRGNNGDNTETEISKSDKESGEEKSDTGEVPQSVPIQTTKLHGKSKATGRIMGG
WI
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatcggaatcgcagcaaaatctactttcgaacgaggtgagacaaccctcggta
cagtcgttacagtcacccgttgactatgttctcggcccagtcgaaaagcatttcctactt
agtgcggaacgaggtgattgtgccacggtcagaaggttgatcgaagaaaacaaggaccat
ccggatatcttaaatatcaattgcgtcgatccgttaaatcgatcggcgttaatagccgcg
atcgagaatgagaacatggaacttattaagttgctgctcgaattggggattgaagtgaag
gatgcacttttgcacgccattaaagaagagtacgtggaggcagtggaggtcttgctggaa
tgggaagaaaaaatacacaagcaaggacagccttacagttgggaagcagtggatggctca
tcaaattttacagctgacataactccgttgactttggcggctcacaaaaacaattacgag
atactgaaactgcttttggatcgcggtgcgactcttccaacgcctcacgatgctaggtgt
ggttgcgacgagtgcgtcacttccagtgaacaagactccctccggcactcgcaatctcga
ctcaacgcgtatcgggcgctcacctcatcatctttgatagcgctttcatcgagagaccca
cttttgacggccttcgagctttcgtgggaactgcgtcgtcttagcaaaatggagcaagaa
cttcgtgccgaatacatcgagatgcgggaactgacacaacagtttgcaacctccctactg
gaccacgtgcgtacgtcttacgaattggaaataatgctgaattataatccttcaggggac
aattgggaccctggggagagacagaccttggaccgactcaaactagccattaaatataag
cagaagcaatttgtgtcacacccgaacgtgcagcaattattggccgctatttggtacgac
ggtcttccgggattccgacggaaaagcatgttcgcgcagcttttggaagtcgccaagctc
ggagcgatgtttccggtttacagcactatatacatgatggcacctacttcgcaaatggga
ctatttatgaagaagccgtttgtaaagtttatatgtcattccgcatcatatgcttttttc
ctaatgcttctcgggatggcatcgcaaagaatcgagtatctgttaatcgagttattcggt
aacgagtggatgcgagagatacttgctggttgggagaaacgagaacgcggttgcattccg
ggttttgttgagacaggcgtagtaatctacgtgataagtttgatcagcgccgaaattaag
tctttatgggcagacggattactcgaatatgtatcggatctgtggaacatcgtagacttc
attcaaaataccttttatgtaatctggataagtctacggattacagcttggtggatagtg
cagaaagaatactggagtggcttggacccttggtacccgagagatcaatggcacgcattt
gatccaatgttgctttcggagggtgcatttgcagccgggatgatatttagttttttgaaa
ctcgtccacatattcagcgtaaatccccatctcgggccactccagatttccctcgggaga
atgataatagacattatcaagttcttcttcatttacactcttgtgctatttgccttcggc
tgcggcatgaatcagctaatgtggtattatgcagacttggaaaaaaggaagtgttaccat
gcatccgacgagttgccagattatgataatcaggagaaagcttgtttcatatggaggaga
ttcgccaacttgttcgagacatctcaatctcttttctgggcaagttttgggatgatcgat
ttaatgtcgttcgatctaactggcataaagagcttcactcgattctgggcgcttctcatg
tttggttcttattccgtgataaacgtcattgtgctgctgaacatgctgatcgctatgatg
tccaattcttaccagattatttcggaacgatctgacacagaatggaaatttgcgaggagc
cacttatggatgagctactttgaagatggtgatactgtgccaccgccgttcaacgtgatt
cctaccaataaaactttcgaaaagctaatcaagtgcggaaagaccagtcgctcgacaaga
tcttttatcaaaaagtctcgagagaaagctcagtccagacacgacactgtagtgcgtttg
ctgatacgccgctacgtgatggctgagcagaggaagcgagacgagttcggcatcacggag
gatgatgtcatggaaattcgtcaagatatttcgaccttccgttacgagttgatcgatatc
cttaagaagaacgggatgcgcacaccgtcgcttgataaagacgatacaactatatccggc
aagaagggcagagtgatggaacgtcgtctgcagaaggacttccagattggcatagtagaa
ggcatcgtacaagcgatcatccagagtgagaaggagccaaaggatgtgtttagtcaaatc
gcaaaggcgatcggccataaaggaagtattactggcaagaaagactggaacgccatggtg
aggcaaagtagcgtcgcggtggatccgatcggcagtacgaacgaagcggttcaacgccaa
aaccgacgcagtctgcgtcgtcatttgcggcaccaaccggattctgatctggcgtctttg
gatccgaaacgattggtcgagtataatccgaatctctcggaggtcacgccggctactaga
atcgcctatgctaagtttatcatcagcaagcgcaagctgaacgagcaggctgacgagagt
gcgagtggtccctcacaagagacgccggaacaaaatggcaaggctccacgaagaagtagt
aaagttatgatcgcagaaactgcaacggatactgttccgcgacaaagtcccgtcgagtca
actaagaagagctcattaaagtcgactagcgttgacaaatcgtcggaaaaaggactcgat
gttaaagcaaccgaaatcagatctccctcacccataccagaggatcccgtgggagaggaa
gctggcaagccgtcaacatcatcagcgatatctggtcgggagaagaaagccgatggaaag
gatgaatccaaaaaggaagatatgcaagaacaacgggggggagaggaatctggagaagca
agcgagaaagacaagtcggaggagcagaagagagaagggagagtagaggataaagataga
cctcagcaatcggaaagtacgcgggggaataacggcgataacaccgagacggagatttcg
aaatcggacaaggaaagtggcgaagaaaaatcagacacgggggaagtaccccagagcgtg
ccgatccagactacaaaattgcacggaaaatcaaaggcgactggccgaataatgggaggc
tggatttag
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