Ooceraea biroi (clonal raider ant): 105285231
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Entry
105285231 CDS
T05778
Name
(RefSeq) transcription factor Sox-1a
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obo03000
]
105285231
Transcription factors [BR:
obo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105285231
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
Motif
Other DBs
NCBI-GeneID:
105285231
NCBI-ProteinID:
XP_011347627
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Position
5:15016089..15024987
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AA seq
399 aa
AA seq
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MTFFTFSCRKKNLLCPRISSIFMRVLDCAYQLVKKVFCARVRTGIKMEAHHNNNGLPSME
DKAGPSSNEHCSNNSLDDAVGKLLQGYDWTLLPVTSRAGGRRSAHVKRPMNAFMVWAQAA
RRRLADQYPQLHNAELSKTLGKLWRILSDGEKQPFIEEAERLRNAHKKQHPHYKYQPRRR
KPKSDDQMSIIMHRGGLSSPGTSLDSSASPSDCTYARLYPDTGVKTYERPSTYHEPKSST
YDLARPVWVNETVAKYPTAADHPGKQTYETRSYAEAKCHEVAKYHEMTGTRSYHHHEPTA
IKYSDLQAKSYDLPKGYPEAKGYPDGLKYPAEMSGVTAAAAAAKTSYTCVHGQYYPTAEG
YAVHGEENDYQSQSVSSHPSFYPYISASMAQPPYYMGPR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacatttttcacattttcgtgccgaaagaagaatttgttgtgtccgcggatctcttca
atatttatgagagtcttggattgtgcgtaccaactggtgaaaaaagtgttttgcgcgcgt
gttaggacggggataaaaatggaggcccatcacaataataacggtttgccatcgatggag
gataaagctggcccatccagcaatgaacactgcagcaacaactccttggacgacgccgtg
ggcaaattactgcaaggatacgactggacgctacttccggtaacttcgcgcgccggtgga
cgaagaagtgcccatgtgaagcggcctatgaacgccttcatggtgtgggcacaggcggca
agacgacgattggccgatcaatatccgcaattgcataacgccgaattgtcaaaaacgttg
ggaaagttgtggaggattttgagcgacggtgagaagcagccgtttatcgaggaagctgaa
agactgcgaaacgcgcacaagaagcaacatccgcattacaagtatcagccgcgtcggagg
aagccgaagtcggacgatcagatgagcatcatcatgcacagaggcggactatcatcgccg
gggacttccctcgactcttcggctagtccttcggactgcacgtacgctcgtctgtacccg
gacaccggtgtaaagacgtatgaacgaccgtcgacttatcacgagcccaaatccagtacg
tatgacctagccagaccggtctgggtgaacgagaccgtcgcaaagtatcccactgccgcc
gatcatcctggcaagcagacgtacgagacgaggagttacgccgaggccaagtgtcacgaa
gtcgccaagtaccacgagatgactggcaccaggtcgtatcatcatcacgaaccgacggcg
atcaaatactcggacttgcaggctaaatcctacgatctgcccaaggggtatccggaagcc
aaggggtatccagatggtctcaagtatcccgcggagatgagtggagtcaccgctgccgca
gccgccgctaagacttcctacacctgcgtgcacgggcagtattatcccaccgcggaagga
tacgctgttcacggtgaggaaaacgactatcagtcgcagagcgtgtcgtcgcatccttcc
ttttatccctacatatcggcgtccatggcgcaaccaccgtattatatgggaccccgataa
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