KEGG   Ooceraea biroi (clonal raider ant): 105285255
Entry
105285255         CDS       T05778                                 
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
  KO
K15323  tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
Organism
obo  Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:obo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:obo03016]
    105285255
Enzymes [BR:obo01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     105285255
Transfer RNA biogenesis [BR:obo03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    105285255
SSDB
Motif
Pfam: tRNA_int_endo Nop14
Other DBs
NCBI-GeneID: 105285255
NCBI-ProteinID: XP_026825301
LinkDB
Position
5:15274665..15276541
AA seq 301 aa
MPDIYLVASRNNVFVWNANDWLKLRRDYRIIGELVGSFPKSTRQDVFSGLPLLLLSEEVT
LLLEKGIACLIECVNLDKPTESLKEKFQEYRNVLFLQQAECLRENRRKQITSVMDKIVEG
KKRKMLGLHTSKKNMKKPLDKKTREAMDNIEINTQDLLEEELAKLPKLCKNEALVQTHTA
YPWNSTDSMKTVEWKYPVTSNQQLKYKVYKDLWERNYYITSGEKFGGDFLVYPGDPIMFH
SQFIVLCKSKDEELSITELIAQCRVSCHVRKTLVFAIYCEEEDKVKYQSLQWAESNILES
C
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccggatatatacctcgttgcttcaagaaataatgtttttgtatggaatgctaatgat
tggttgaagctgcgacgggattacagaataatcggtgaattagtaggttcctttcccaaa
tcaactagacaggatgtattttcaggtctcccgttgcttctattatcagaagaagtaact
cttttactcgagaagggaattgcttgcctcatagagtgcgttaatttagacaaaccaact
gaatcattgaaggaaaaatttcaagaataccggaatgtgttgttcctacagcaagcagaa
tgtttgagagaaaatagaagaaaacagatcacttctgtaatggataaaattgtagaagga
aaaaagcgcaagatgttgggcttgcatacaagcaagaagaacatgaagaaaccgttggat
aagaagacacgggaagccatggataatattgaaataaatactcaagatctgctcgaagaa
gaattggctaaattgcctaaattgtgtaaaaatgaagcgcttgtacaaacacatacagca
tatccatggaatagtacagattccatgaaaactgtggagtggaaatacccagttacttct
aatcaacaacttaagtacaaagtatataaagatctttgggagaggaactattacattacg
agtggggaaaaatttggtggtgatttcttggtatatccaggtgacccaataatgtttcat
tcacaatttatagtactgtgcaaatccaaagacgaagagctatctatcacggaactcata
gctcaatgcagagttagttgtcacgtgagaaaaacattggtgtttgctatatactgcgaa
gaagaagataaagtaaaatatcaatctttacagtgggcagaaagtaatatacttgaaagt
tgctaa

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