Ooceraea biroi (clonal raider ant): 105285467
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Entry
105285467 CDS
T05778
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 20
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105285467
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105285467
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
F-box-like
LRR_4
LRR_At5g56370
F-box
LRR_At1g61320_AtMIF1
LRR_8
LRR_R13L1-DRL21
F-box_4
Motif
Other DBs
NCBI-GeneID:
105285467
NCBI-ProteinID:
XP_011347996
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Position
1:6911997..6929826
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AA seq
518 aa
AA seq
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MIHSGRTRLEKKVSLQQLVGGVGGGSQVLAIEESEKGGSGTGGQWWKQQHPSYHHHYHHH
HHQQHYHHQGGYYTSQSHTHNNPVTTMKQSYMQLTWVFHDDEAQINKKLPKELLLRIFSY
LDVVSLCRCAQVSKAXDVLALDGSNWQRIDLFDFQRDVEGPVIENISRRCGGFLRQLSLK
GCQSIGNNSMRTLAQSCPNIEELNLSQCKRISDATCAPSAAXLPKLQRLNLDSCPEITDM
SLKDLAAGCPLLTHINLSWCELLTDNGLTRSXQGCPELRSFLSKGCRQLTDKAVMCLARY
CPNLEAINLXECRNITDDGVRELSERCPRLHYVCLSNCPNLTDATLISLAQHCPLLSVLE
CVACTHFTDTGFQALARNCKLLEKMDLEECLLITDATLTHLAMGCPRLEKLSLSHCEQIX
DEGLRQIALSPCAAEHLAVLELDNCPNITDNGLNHLMQACHNLERIELYDCLHITREGIR
KLRAHLPNLKVHAYFAPPTPPPSAGASRQRYCRCCVIL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatacactccgggcgcaccaggctcgagaaaaaagtaagtctccaacaattagtggga
ggagtgggaggagggagccaagtactggcgatcgaggaatcggaaaaaggaggcagcggt
accggtggacaatggtggaagcagcagcatccatcctatcatcaccattatcaccatcat
catcatcaacaacattatcatcatcagggcggttattacacgtcgcaatcgcatactcac
aacaaccctgtcactaccatgaagcaatcctatatgcagctaacatgggtatttcacgat
gacgaggcgcagatcaacaagaaactgccaaaagaattgctactcagaattttttcatac
ctcgatgtcgtatcactatgccgttgtgcccaagtgagcaaggctnnggacgtgttagcg
ctcgatgggtccaattggcagaggatcgatctcttcgactttcaacgagatgtggaggga
ccagtgatagaaaatatctcgaggcgttgtggcggatttctcaggcagctctcgctcaag
ggatgccagagtatcggcaacaactcgatgcgcaccctagcccaatcgtgtcctaatatc
gaggagctcaatctgagccagtgcaagaggatctcggacgcgacctgcgcgccctcagca
gccnnactgcccaagctgcagcgactgaatctggactcgtgtcccgagataacggacatg
tccctgaaggatctcgcggccggttgcccgctactcactcacatcaacctctcgtggtgt
gagttgctcaccgacaacgggttgacgcgctcgnnccaaggctgcccggagctccggagc
tttctgagcaagggatgccgccagctgacggacaaggccgtgatgtgcttagcgcgctac
tgtcctaatctcgaagccatcaatctanccgaatgcaggaatataacggacgacggagtt
agagaacttagcgaacggtgtccacggctgcattacgtttgcctgtcgaattgccccaat
ttaacggacgcgacgttgattagcctggcacaacactgtccactcctcagtgtactcgag
tgcgtcgcgtgcacccatttcacggatacgggctttcaggccctcgcgagaaactgcaaa
ctactcgagaagatggatctggaagagtgccttttaatcaccgacgccaccctcactcac
ctggcgatgggttgcccgaggttggagaaactaagtctgtcacactgcgagcagatcnac
gacgaaggcctccgacaaatcgcgctgtcgccttgcgcggcggaacacctagccgtcttg
gagctggacaactgcccgaacatcacggacaacggtctgaaccatctgatgcaggcctgc
cacaatcttgagcgtatcgaactttacgactgcctacacattaccagagagggcatacgt
aaactcagagcccacctaccgaacttaaaggtgcacgcgtatttcgcaccgccgacaccg
ccacccagtgcgggagcctcgcgacaacgatactgtcggtgctgcgtcattctgtga
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