Ooceraea biroi (clonal raider ant): 105285671
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Entry
105285671 CDS
T05778
Name
(RefSeq) nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105285671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105285671
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105285671
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
105285671
NCBI-ProteinID:
XP_026827727
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All DBs
Position
8:complement(14926617..14928879)
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AA seq
576 aa
AA seq
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MIQPDDKSSKELLTRRIFLAVVSSVTLQFFFVCCLVLFANLSTDYVHWLQETWSIVTSLR
MWTFLVIFTTVVFLQAVFCRRVYLHTPPYYKSRFTKLLATFTAQNLYLGTLYVIIGGILI
WFHLLLKGGRYSSLIADCSVIHGTCLVEEYSFLLFSGLWSGLYFSFKTRSSIGRYFRFPI
IAQSKFFQFRRRIYTALPTLMLSSLWSTLYYMTVYYFVGSYCHMVLLFTISMQAEVELDT
MSMLLNLSLILQLWFYQFVFVLTINSTYLFFEVYLTEWTQFKFGLSGALSTDGSELTLIE
ALSMDKIPIMQHLGYLDLVTLAQKEKARRATLFTLSQPGGHPYNWNCVVQRCTDLLNKFS
SDLNAISVKPQPPLTCYGKSVLTTMGRPTQQKDRVYHMRKLVPDVAPTLTAVETITQETS
YTGLLAQFVKQKRDAFVTYLLSKPLINYIFGEQDENKIRYVLFNSQPVMWAAEAISSLSV
FSLTEDHHGIVQKDIPTIVNALLSVKQALDKQQKSVILARRLQTEDKLIREIFTSLRSAI
KRSLYRIVTNFEPYINDLCLESAAVEQLQSFLNYKE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgattcaacctgacgacaaaagcagcaaggagctgctcacacggcggatcttcctcgcc
gtcgtctcgagtgtaactctgcaattcttcttcgtctgctgcctggtcctgttcgcgaac
ctgagcacggactacgtccactggctccaggaaacgtggtcgatcgtgacgtcgctgcga
atgtggacttttctcgtcatcttcaccacggtggtgttcctgcaggctgttttctgcagg
agggtctacctgcacaccccaccgtactacaagagcaggttcaccaagctgctggcgacc
ttcacggcccaaaatctctacctgggaacgctgtacgtcatcatcggcggcatcttgatc
tggttccacttgttgctgaaaggaggaaggtacagctccctcatcgcagactgcagcgtg
atacacggaacgtgtttggtggaggagtactccttcctgttattcagcggcctgtggagc
ggactgtacttctccttcaagacccgtagctctatcgggagatacttccgcttccccatc
attgcacagtccaagttctttcagtttagacggaggatttacaccgcgctaccgacgctg
atgctttcctccctgtggtcaactctgtactacatgactgtttactacttcgtggggtca
tactgccatatggtgctgctgttcacgatttctatgcaagcggaagttgaattagacact
atgtccatgttgttgaacttgtcactaatattgcagttgtggttttaccagttcgtgttc
gtgctgacgataaacagcacgtatctgttcttcgaagtatacctgaccgagtggactcag
tttaagtttggactgagtggcgcgctcagtacagacggctcggaattgacgcttattgaa
gccctgtcaatggacaagataccgataatgcagcatttgggctacttggacctggtcacc
ttggcccagaaggagaaagcaagaagggccacgttgttcacactcagtcagccgggcggt
cacccatacaattggaactgcgtggtgcagaggtgcacggatctcctcaacaagttctcg
tcggatctcaacgctatttccgtaaaaccgcagcccccactgacctgctacggtaagagc
gtgttgacaacgatgggtagacctactcagcaaaaggatcgcgtgtatcacatgcggaag
ttggtgccagacgttgcgccgacgttaacagcggtggaaacgatcacgcaggagacctct
tacaccggcctgcttgctcagttcgtcaagcaaaaacgcgacgcttttgtaacgtacctt
ctctctaaaccacttattaattacattttcggcgagcaagacgagaataaaattcgttac
gttttatttaatagtcagccagtgatgtgggctgccgaagccatttcctctctgtcggtg
ttctcgttgaccgaggaccaccacggcattgtgcaaaaagatataccgactatcgttaac
gctttgttgtcggtgaagcaggctctagataaacagcagaagtcagttatactagctaga
cgactgcaaacggaggacaagttgattagggaaattttcacgtctctacgaagtgcgatc
aagcgtagtctctatagaattgttacaaatttcgaaccgtacatcaatgacttgtgcctt
gaatccgcagcagtagagcaactgcaaagttttcttaattataaagaatag
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