Ooceraea biroi (clonal raider ant): 105285915
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Entry
105285915 CDS
T05778
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
obo03015
mRNA surveillance pathway
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105285915
09122 Translation
03013 Nucleocytoplasmic transport
105285915
03015 mRNA surveillance pathway
105285915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105285915
03041 Spliceosome [BR:
obo03041
]
105285915
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105285915
Spliceosome [BR:
obo03041
]
Complex C
Other components
EJC/TREX
105285915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
105285915
NCBI-ProteinID:
XP_011348781
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Position
6:complement(14935374..14941275)
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AA seq
886 aa
AA seq
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MKMVALCRFVCMCMRRKSERNKAKGSPEKKVEKPTRKSTRRRGRRSPSTSSEQDAFVEDA
TKGITQLKEIDKETSMQTRLQSKEMEQMPQGREEKVSSSDRDMKADSPEDEVDNSGSVWK
VARADASPGEIQKLKLCRQRNTSEVSSETAVSSRKGGQSSGKWQESGEGVVEEADSADEQ
LVSYTRTLSSTEQPIAPSSSYPGQDSNEEVSDSKEILPETTSANLSDDKPNIDQHAESNE
ANCAAQYVDSEPDKPGSTTTAPAPSANGDSCEKVATAAAADIAKEDKSTEDASEMPMETF
NIQESTTEKEEEVHKDTSSEDEEDNKAETQRPVDSSSDSNDESRTKRSRTSSDRTSPRAT
RRKHRNKYGDSSNSETPDSEDEPVERKVSEPYIEEREEEEEDEEKPNLEHVRENDKERSV
SPERTNSHSQNNVEKIEADHDHCETVKIKSEENVSEKSEQIVLASSQAVVHKPVKVNLKR
SFTARMLSDNSEVKKDDTDASVDNEASSQNKENGGEQEPKCIPRKRRWGTALSTDTAPSF
SISTDSLKALVPGAKPLPINEVRLSKDDDEDRDRHRSNDKRHSSNDSTNDDKAIDESSQK
NGAAKKGNGKVDNHIATRRKISIVKEMPHVKSPSPPASKPTSILLIKNLVRPFTLNQIKE
LLSRTGTIVENGFWMDRIKSKCIVEYSNEDQAFETRQALHGISWPMSNPKKLHVEYATRE
DMEAARESSKEQPIARKTEPLSSDSWQQDWGRDEKTNTTKVTVVREWDLGKEDGQQHMRE
KEREKKEHDKKRRARSRSPALDTHLSAPARKFKKKEDDPPPAKLLDDLFRKTKATPCIYW
LPLTNEQIVVKEEMRRQHMAEHARRLEEMRRADRNRDGRRRRSPRK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtggcgttgtgtagattcgtgtgtatgtgcatgagacgcaaaagcgaaagg
aacaaagcaaagggatctccggagaaaaaagttgagaaaccaacgagaaagtcaacgcgt
aggcgtggcaggagatcaccctctacttcgtcggaacaagatgcttttgtcgaggatgca
actaaaggaattactcagctcaaagagatcgataaggagacaagcatgcagacgcgccta
cagagcaaggaaatggaacagatgccacaaggccgggaggagaaggtctcctccagcgac
agagacatgaaggcggactcgccagaagacgaggtggacaacagcggatcagtgtggaaa
gtggcaagggcggatgcgtcgcccggtgagatacagaagctaaaactatgtaggcagcgc
aacacgtcagaagtatcatccgaaacagcagtatcgagtaggaaaggtggccagtcaagt
ggcaagtggcaggaaagtggtgagggcgttgtagaggaggctgactcggccgatgagcaa
ctggtttcttatacaagaacactcagtagcactgaacagccgatcgctccctcctcttca
tacccaggtcaggactccaacgaagaggtaagtgatagcaaggagatcctgcctgaaacc
acttcggccaacttgtctgacgataaaccaaacatagatcagcatgctgaatcaaatgag
gcaaattgcgctgcccaatacgttgatagcgaacctgataagccgggtagtacgacaacc
gcgccggctcctagcgcaaacggcgactcttgcgagaaggtcgccactgctgctgccgct
gacatcgccaaagaagataaatctacggaagatgccagcgaaatgccaatggaaacattc
aacatccaagaaagtaccacggagaaggaggaggaggttcacaaagacacaagtagtgag
gatgaggaggacaataaagcggaaacgcaacgtccagtggattcgtcatccgattcaaat
gacgagtcgcgcaccaaaagaagtagaacgagcagcgatcgaacatcgccacgtgcgact
cgtagaaaacatcgaaacaagtacggcgactcgtccaattctgaaacacctgattctgag
gacgagccggtcgagagaaaagtttccgagccttatatagaggagagggaggaggaggag
gaggatgaagaaaaaccaaatctggaacatgtacgagaaaatgataaggaacgatcggta
tcgccggaaaggactaactctcattctcagaacaatgtagaaaagatcgaggcggatcat
gatcattgcgaaactgtcaaaattaaatcggaagaaaatgtcagtgagaaatcggaacaa
attgtactggccagctctcaggcagtagttcacaaaccagttaaagttaacttgaaaaga
tcattcactgcaaggatgttatctgataatagtgaagtaaaaaaagacgataccgatgca
agcgttgacaatgaggccagtagtcaaaataaggagaatggtggcgaacaggaaccaaaa
tgtataccgagaaaacgtcgatggggaaccgcgctttccaccgataccgcgccttcgttc
tccatttcgaccgactcgcttaaagcattggtgcccggtgcgaagccgttacccatcaat
gaggttcgtctttcgaaagatgacgacgaggatagagatcgccatagaagtaatgacaag
cggcacagctccaacgacagtacaaacgatgacaaggcaatagacgagagctcgcagaag
aacggcgctgctaaaaagggcaacggaaaagtggacaaccacattgcgacgaggcgaaaa
atatcgatcgtgaaggaaatgccacacgtgaaatcgccgagcccaccagcgtctaaacct
acaagtatactcttgatcaagaatctagttcgtcctttcacattaaatcaaataaaggag
cttctttcccgtactggcaccatcgtggagaatgggttctggatggatcgaattaaatcc
aagtgcattgtcgagtattccaacgaggatcaagcattcgagacgagacaggcgcttcat
gggatctcctggcctatgtcgaatccgaagaagcttcacgtggaatacgctacgagggag
gacatggaggctgcccgggaatcgtccaaggaacaaccgatcgcccgcaagacggagccg
ctctcgtccgattcgtggcagcaggattggggtcgtgatgaaaaaaccaatacgaccaag
gtgaccgtggtgagagagtgggacctgggtaaggaagatggccaacagcacatgagggag
aaggagcgcgagaagaaggagcatgacaagaagcgacgagcacggagtcggagccctgcg
ttggatactcatctgtccgcaccagctcgcaaattcaagaagaaagaggacgacccgcca
ccggccaagctcctggatgatctcttcagaaagacgaaagcgacgccttgcatatactgg
ttaccacttacgaacgaacagatagttgtgaaggaggagatgcggcggcaacacatggcg
gaacatgcgcgtagactagaagagatgagacgcgccgatagaaacagggatggtcggcgt
cgacgtagtccgcgaaaataa
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