Ooceraea biroi (clonal raider ant): 105285925
Help
Entry
105285925 CDS
T05778
Name
(RefSeq) uncharacterized protein LOC105285925
KO
K20286
TATA element modulatory factor
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105285925
Membrane trafficking [BR:
obo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105285925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Motif
Other DBs
NCBI-GeneID:
105285925
NCBI-ProteinID:
XP_011348800
LinkDB
All DBs
Position
4:17550440..17561498
Genome browser
AA seq
2389 aa
AA seq
DB search
MSWFDATGFANLAKSALKEAQKTIDKALDIKEEEPKVIQSRPVDTSDFFASWGLQNEEDT
SKHDNNPQKQPGSSSIWGSFTGSFFEPPKIIDENTWKTVKHSKSLQNTSGQNEQQQKLVS
STSAPEKLTAKETKAATVENESTYKRNETDSNTVSKSVNTSPSISKESDGKAASEPCTPP
EQLSVDNVPISTEKCVAKSASLDLEQVYRAPRTDNIDDDSTTSSDEGEEEQCANEVVSES
NDADRTSSPINVFHKVPAVSSESDKKSLESVEILGSESNTDCTTTPESDPNSVSNSLSPS
VVDIKVNSESVEILPDSLVTSPSSVEVLGDWKSDSSPYLSPIDPKNSESPPVLDGDECPT
PCVECHNMLQPPRDHYAEASSSDISPYESPMEEVRTLNVTNSSYPCSIDSTPSPNAFPGL
DASKTSYSHADSSKTSPDSVEVIPDVDELDEVSVADDSYTSASEGTVMTVLESFQQLDAT
VKNKIELADVSMKMPTKMHDSCPDDKQTSAKTCTESKLNLSLDSLKEKHNMHLMIEPITT
QPIRKLDYLEGVSEKPDLSTFSQLMSTIEPPDPDSYPQAENAADSTIIESSTDQYLISTD
SSREGTLIESSSEDNTTLICTGDSKVPEAPLTASSYVKTMLADAMVEKGELTDMEQHCTE
MHRENSPISSESRSDLVKIGSDQASGHTSGDELETTTSSDIEIISSPNGDSSSTQSRQSP
AKLQLTKGGDLLTKTLKTRGHSRELSEISIGSDEANMEIEKLLKRIQEMTEILEARESKL
IDVSRINMELHEQNANLMKQLENFEKHAEQNQNINQITDEYTQRLSALERKFQQAIRERD
QLRKNLDQLKLEAASRLSSQEMSSINAEKDEIIKELREEGEKLSKQQLQHSNIIKKLRVK
EKETDATIKSQKEQIEEQNTELERLKRSLHAKEEVERSQIEAVHTLTAKTKKQEKEILTL
QEKLDNTAHKMEAYKKSLDAAKMDLTETRKKLLTTEEELKEAVDNAGESCQLLAQVENLK
LKYRQAEESHVKREEFLKQENNELLKRLEVAEARSEELSESVSVATKPLLRQLEQLQASL
LHKSNSFMKQEKVLSEKNIELQSKIENLLEMDRLLREENVNLKSKESHLESKLNIKERER
LKLQESHDKLKEENERLLERDAQLQDAINALEETHSANIQELKEEINALEEKLAVEKAAI
DAERRRNNAVMEQQQNTDEELRFSPTLSIEQESVSSVNSVWPAFSENSVFDNNSGRFPPM
SYEGIRAGSSSTSIFENLQAQLKQRDGEIQQLQWELSRRNVERDALNAELATLTLKVEDL
SSKVSEAQALNESLSETQTRYDALLQMYGEKVEENQELRLDLEDIKEMKIIILYEQSMIN
LRALQQKMVNPQRKRMITPDVMLDTRNVMIPVVRPVPVKQSFNIPFSEDRPQILWAQNYK
NNPALMFFETPSHTLYNPLRNLLEVKRLNGTKLKNQSTKYTISGKADSTGIKGIDTLQNA
CPSEESSCNKNDRTLCFPNTVPVHLETSTDDQDLHRASSRSIELSRKHNLPQMKHPRTKC
EDRFAILPKIEAQVSNDMSESPIVSLPNQSFYDTDTASTISALVSLSAPSFTMENEEAFA
NTLNQKSVFRITSNQLQSINSECEINVLHYENDALAENCTTHFVQRCLNSTKTNSSTNTS
SAKIRDDNVIDEKSRIKHFYKWEAANWMPLSQGKQYDTYGIKSVGVYSKKPYECKIKYSW
QVIGISTQTSSSLLQDLLDNTSANEPAYKMCSIKYSWQIIGIGTQASLHDCHNDPDYWSG
VLLSPNKNRDENNSQIGSNETDRSKLRDRVKCAKGGLRRHLILNNQETQTFAEKDVQTDD
QLYYMEQILEALTNQNLSDELEMEHLGSRDKLFEKYTIKPLMPNISSKSPVTLASNGNEN
TKKEELLTRLTNTLKKLNEYERGNLDENWDPSHLVAKDTFAQTTEALPENVEEIVTGIVQ
STQEYIAKLDYQLKDLDNADQEIENSMMKTLKDIDGTFQSLLDDVCHEINKRREQLILET
DIHKHESLIPLRACRREVEAQIRNARNVISMSEDVLQRPCQYSAFANFVAASNDIGRIPA
VPYSDELPSINFDRPLSSYKEEIIEQISKLGCVSPTMPVQIMNIEERPAGLFVKWHITNP
EYVAEEQMFVVEKANGEILDPASSEFETVYKGSETFCFIRNIEIDQPVTLRVRIQADNIA
RSVHHIARTTILPYSWETNNKDYMITNNGKIAAKLTDAISTLFSQGPQFDANHVIEFKFL
EVSQEGNDDEGIALVYDPQGSHDALKRTASLMITPRGKIFMDGDEKLMRLPKMRFGTNIT
ISAFKKNARVLRVNIESENKCVTYDWRVQTPLYFAARFTECKKWNLMIK
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcgatgccacgggatttgccaacttggcgaaatccgcgctgaaggaggct
cagaaaacgatagacaaggccttggatatcaaggaggaagagccaaaggtaattcagtcg
cgcccggtggacacttcagacttctttgctagctggggattgcaaaatgaagaggacacc
agcaaacatgacaacaatccgcagaaacaaccaggttcgagcagcatttggggtagcttt
acgggatcgttcttcgaacccccgaagatcatagatgagaatacgtggaagaccgttaag
cattccaagtcgttgcaaaacaccagcggtcagaatgaacagcaacaaaagctggtatct
tccacttccgctcccgaaaaactgactgcgaaggagacgaaagctgcaacagtagaaaac
gagtctacatacaagagaaatgaaacggattccaatactgtcagtaaatctgtaaatact
agccctagcatatccaaagagtctgatggcaaagctgcatcagagccttgtacgcctcca
gagcagctatctgtggataatgttcctatcagtacggaaaagtgtgtagctaaaagtgcc
agtctggatctggaacaagtgtatcgagccccgaggacagacaatattgacgatgattcc
acaacgagcagcgatgagggggaagaagaacagtgcgccaacgaggtggtatcagaaagc
aacgacgccgatcgcacgtcgagtcccattaatgtgttccataaagtacctgccgtttcc
tccgagagtgacaagaagagtctggagagtgtggagatacttggttccgagtcgaacacc
gactgcaccaccacgccagaatcggatcccaattcggtcagtaattcgctgagtccctcc
gtcgtggacatcaaggtgaactccgagtcggttgagatcctgccggacagcctggtgacg
tcgccgagctccgtggaagtgctgggcgattggaaaagcgacagcagtccgtacctgtct
ccgatcgaccctaagaattcagagtcgccgccggttctggacggcgatgaatgccccacg
ccgtgcgtggagtgccacaacatgctacagccaccgagggatcactacgcggaagcgtcc
tcgtccgacatctccccgtatgaatctccgatggaagaagtgagaacgttgaacgtcacg
aactcctcgtacccctgcagtatcgatagcacaccgtcgccgaacgcgttccccggttta
gacgcgagtaagacttcgtactcgcacgcggacagctcgaaaacctcccccgacagcgtc
gaggtaataccggacgtggacgaactggatgaagtaagcgtggctgacgactcttacact
tcagcttccgaaggcacggtaatgacggtgctcgaatcgtttcaacagttggatgcaaca
gttaagaacaagatcgaactggctgacgtaagtatgaagatgcctacgaagatgcacgac
tcatgcccggacgacaagcaaacgtcagcgaaaacctgcaccgagagcaagttaaacctg
agtctcgattctctgaaggagaagcacaacatgcatctgatgatcgagccgatcaccact
cagccaattcgaaaattggactacctggagggagtaagcgagaagccggatctttccacg
ttttctcaattaatgagcactatagaaccgccagatcccgatagttatcctcaggccgag
aacgcggcagatagcacgataatcgaaagtagtaccgatcagtatttaatatctaccgat
tcgagcagggagggaacgttgattgaaagtagctcggaagataacacgacgttaatctgc
acgggtgattcgaaggtgccggaggctcccttgaccgctagttcttacgtgaagactatg
ctggctgatgctatggtcgagaagggcgagctgactgatatggagcaacattgcacggaa
atgcatcgagaaaattcacccatatcatcagaaagtcgttcggacctagtgaaaattggc
tccgatcaggctagtgggcatacgagtggcgacgaattggaaaccacaacgtcgagcgac
atcgagataatatccagtccaaacggggactcgagttcgacgcaatctcgacagagtcca
gcgaaattgcagttgactaaaggcggtgatctgctgacgaaaaccttgaagaccagaggc
cactcccgcgagttgagcgagatcagtatcggctcggacgaggcgaatatggagattgag
aaattattgaaacgcatacaggaaatgacggaaattttggaagcgagggagtcgaagcta
atcgacgtgagcagaataaacatggagttgcacgagcaaaatgcgaatttaatgaagcag
cttgagaatttcgagaaacacgcggagcagaatcaaaatataaatcaaatcacggatgag
tacacgcagcgtttgtcggcattggagaggaagtttcagcaggcgataagggagcgcgat
cagttgcggaagaatttggatcagttgaaactggaggcggcgtcgcggctgtcgtcgcag
gaaatgtccagcattaacgccgagaaagatgaaattataaaggagctgcgcgaggagggc
gagaagctcagcaagcaacagcttcagcacagcaatatcattaagaagctgcgagtgaag
gaaaaggaaacggacgcgacgataaagagtcaaaaagaacaaatcgaggagcagaatacg
gaattggagaggctgaagcgatcgctacacgcgaaggaggaggtggagcgcagccagata
gaagctgtccacacactcaccgcgaaaacgaagaagcaagagaaggaaatactgacgctg
caggaaaaactggataacacggcgcataagatggaagcctataagaagagtctagacgct
gcaaaaatggatttgacggaaactaggaaaaagctgttgaccacggaggaggaattaaag
gaagctgtagataacgcgggagaatcgtgccagttgcttgcacaagtggagaatttgaaa
ttgaagtatcgtcaggccgaggagtctcatgtcaaaagggaagagtttctcaagcaagaa
aataacgagttacttaaacgactggaggtagcggaagctagaagcgaagagttatccgag
tcggtctcggtagcgacgaagcccctgctaagacaactggaacagctccaagcgagtttg
ctacacaaatccaacagcttcatgaagcaagagaaggtcctgtcggagaagaacattgag
ttgcagtcgaaaattgagaacctgttagagatggatcggcttctcagagaggagaacgtt
aatcttaaatccaaggagtcgcacttggaatcgaagctcaacataaaagagagggaaagg
ttgaagttgcaggagtctcatgacaagctgaaagaggaaaacgagagattgttggagcgt
gatgcacagcttcaggacgcaataaatgccctcgaggagacacattccgccaatatacag
gaactgaaagaagaaataaatgccttggaggaaaagctagccgtggagaaggcagcgatc
gacgcggaacgaagacggaacaacgcggtaatggaacagcaacagaacaccgacgaggag
ctgcggtttagccctaccctcagtatagagcaggaatccgtcagcagcgtgaatagcgtc
tggccggcctttagcgaaaactcggtattcgacaataattctggaagattcccgccgatg
tcgtacgagggaattagggcgggttcgagcagcacgtcgattttcgaaaacttacaagcg
caactgaaacagagggacggcgagatacaacaactgcagtgggagctgtctcggcggaac
gtggagagggatgcgttgaacgcggaactggcaacgttaaccctgaaggttgaggatctg
agtagcaaggtctcggaggcgcaggcgctcaacgagagcctcagtgaaacgcagaccagg
tacgacgcgttgctgcagatgtacggtgagaaggtcgaggagaaccaagagctgcggctg
gatctcgaggacatcaaggagatgaaaattatcatcctttacgaacaaagcatgataaat
ttacgagcattacagcagaaaatggttaatccgcagaggaaaaggatgattacgccagac
gtaatgctggataccaggaatgtaatgattcctgtcgtaagacccgtgcctgtcaagcag
agcttcaatatacccttctcggaagacaggcctcaaattctgtgggcacaaaattataag
aacaatcctgcactgatgttctttgagacaccgtcgcatacattgtataatcctttgaga
aacttgcttgaggtaaagagactcaatggtacgaaattgaagaatcaaagtacaaaatac
accatttctgggaaagcagattccacaggcataaagggaatcgatactttgcaaaatgcg
tgcccgtcagaggaatcatcctgtaacaagaacgatcgcacgttgtgctttcccaacaca
gtacctgtgcacttggaaacatcaacagacgatcaagatttgcacagagcgagttcgaga
tccatagaattatcaagaaagcacaatctgccacagatgaagcaccctcgaacgaaatgc
gaggacagatttgcaattttgccaaagatagaggcgcaagtcagtaatgacatgagcgaa
tcgccaattgtgtcgttgccaaaccaatcattctatgatacagacactgcttctacgata
tcagcattggtttcgctgtcagcaccaagtttcacgatggaaaatgaggaagcgtttgca
aatactctgaatcagaaatcagtatttaggataacgtcaaatcaattgcagtctatcaac
agcgaatgtgaaataaatgtgttacattatgagaacgatgctctagcagaaaattgcacc
acgcattttgtacaacgttgcttaaactccaccaaaacaaattcctccactaataccagt
tcagccaagattcgggatgacaatgtcattgatgagaaaagcagaataaaacatttttat
aaatgggaagcagctaattggatgccgctttctcaaggaaagcaatatgatacatatgga
ataaaaagcgtcggtgtgtacagcaaaaagccttacgagtgtaagataaaatattcttgg
caagttattggaataagcacgcaaacgtcaagcagtttgttacaagatttgctggacaat
acgagtgccaatgagcctgcgtataaaatgtgcagcataaaatattcctggcaaatcata
ggaattggcacacaggcatccttgcacgattgtcataacgatccagactactggagtggc
gtgttgttgtcaccgaataagaatcgtgacgagaacaattcccagattggtagtaacgaa
acagatcgtagcaaattgcgagatcgcgtaaaatgtgcgaagggaggattgaggagacac
ttaatactaaataatcaggagacccaaaccttcgccgagaaagatgttcaaactgatgat
caactgtattatatggaacaaattttggaagcgctgaccaaccagaatctgtcagatgag
ttggaaatggaacatctcggcagtcgtgacaaattattcgaaaaatacacgataaaaccg
ttaatgccaaatatttccagcaagagtcctgtaacgctggcaagtaacggcaatgaaaac
accaagaaggaagaacttctgacgagattaacaaacacattaaagaaattgaatgaatac
gaacggggaaatctcgatgaaaattgggatccatcgcatctcgttgcgaaagataccttc
gcacagacaacagaagcactgccagaaaatgtggaagagattgtcacaggcatcgtacaa
tctacgcaggaatatatagcgaaactcgattatcaactgaaagatcttgacaacgctgat
caagagatagaaaatagtatgatgaaaacgttaaaagatatagacgggacatttcaatct
ttgttagatgatgtgtgccatgaaatcaataagagacgcgaacaactgatactggaaaca
gacattcacaagcacgagagtttaataccattgagagcttgcaggagggaagtcgaggca
cagatacgaaacgcacggaacgttatatcgatgagcgaggatgtgctgcaacgtccgtgc
caatacagcgcatttgcaaatttcgttgccgcgagcaatgacataggcaggataccagca
gtgccgtactcggacgagcttccaagcataaatttcgatcgcccgttgagctcgtacaag
gaagagattatcgagcagatatcaaagctcggttgcgtctcccctacgatgcccgttcag
ataatgaacatcgaggaaagacccgcgggtctatttgttaaatggcacataactaatccg
gagtacgtcgccgaggaacaaatgtttgtcgtggagaaagccaacggggagattctcgat
ccggcatcgagcgagttcgagacggtgtacaagggatccgagaccttctgctttataagg
aatatagagattgatcaaccagttacgctgagggttcgaatacaggcggataatattgcg
agaagtgtacatcacatcgcacggaccactatattaccatacagctgggaaaccaataat
aaagattacatgatcactaataatggtaagattgctgcgaaattgacagacgcaataagt
acactgttctcacaaggtcctcagtttgatgcgaatcacgtaattgaattcaagttttta
gaagtctcgcaagaaggaaacgacgacgagggtatcgcactggtttatgatccgcaaggc
agtcacgacgcgttaaagaggaccgcttcgttgatgatcacgcctcgtggtaaaatcttc
atggatggcgacgagaaactgatgcgcttgccgaaaatgcgctttggtacgaacatcacg
atttctgccttcaaaaaaaacgctcgtgtcctacgagtgaacatcgagtctgaaaataaa
tgtgtcacatatgactggcgtgtgcaaacaccactgtacttcgccgctcgatttacagag
tgcaagaagtggaacttgatgatcaaatga
DBGET
integrated database retrieval system
