KEGG   Ooceraea biroi (clonal raider ant): 105286099
Entry
105286099         CDS       T05778                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105286099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105286099
   03041 Spliceosome [BR:obo03041]
    105286099
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105286099
Spliceosome [BR:obo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105286099
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_LRRK2 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Vps41 PQQ
Other DBs
NCBI-GeneID: 105286099
NCBI-ProteinID: XP_011349058
LinkDB
Position
13:complement(9003027..9008945)
AA seq 331 aa
MTEIKDKKLLYNTVLSQTFSPDGNYLLAGNIYGNVSTFDLSKVLGPSKIEENDVQGPSYC
FTAHADQEVACMLSVENFLVTGTRGEISGWDWKMVTSSKAPKTKVSWNIQIPANKDSYDK
PDVNCMVYSKANHVLYAGCGDNNIYIISLEDGKILRTMQGHTDYIHSLATIDNQLASCGE
DGSVRMWDLRKRENTNILTPHLVDKVARPRFGKWIGAVDFTEDWLLCGGGPSLSLWHVRT
MEAATIFDLADQGIHVAEIYEDRVIAGGVAGHVHHMTYQGEVLAKVPTSSLTTYSIVHQE
SPHKVLSMAGSSNYIDISTNFNYREMSVKFA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgacagaaatcaaggataaaaaattactttacaacaccgtactatcgcagacattttca
cccgatggaaattatcttctagctgggaatatttatgggaatgtgtcaacgtttgatctg
tcaaaggtcttaggacctagcaagatagaagagaatgatgtacaagggcccagttattgt
tttactgctcacgctgatcaagaagttgcgtgtatgctttccgtggagaattttcttgtg
acgggaacacgcggcgaaatatcaggatgggattggaagatggtgacttcaagcaaagct
cccaaaactaaagtttcttggaacatacaaattcccgccaataaagacagttatgacaag
ccagatgtaaattgcatggtgtattcgaaagcaaatcacgtgctctatgctggttgtgga
gataataatatatacatcataagcttggaggacggaaaaatactaagaaccatgcaagga
cacaccgattatatccactctcttgccacaatagataatcaacttgcatcctgcggcgag
gatggctccgtgagaatgtgggacctacgcaagagggagaatactaatatactgacgccg
cacttggtggacaaggtcgctcgaccgcgcttcggaaagtggatcggcgcggttgatttt
acagaggattggctgctgtgcggcggcgggcccagtctgtcgttgtggcacgtgcgaacg
atggaggcggcgacgatcttcgatctggccgatcaggggatccatgtcgcggaaatctac
gaggaccgcgtgattgccggcggcgtggccggtcacgttcatcacatgacgtatcagggt
gaagtcctggccaaagtacccacttccagtcttacaacgtacagcatagtgcaccaagag
tcgccgcacaaggtgttgagtatggccggatcttcgaactacatcgatatcagcacgaac
ttcaactatcgcgaaatgtcggtcaagttcgcgtga

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