KEGG   Ooceraea biroi (clonal raider ant): 105286106
Entry
105286106         CDS       T05778                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105286106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:obo03400]
    105286106
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     105286106
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT BRCT_2 LIG3_BRCT IcmF-related_N
Other DBs
NCBI-GeneID: 105286106
NCBI-ProteinID: XP_011349067
LinkDB
Position
12:31309..33329
AA seq 491 aa
MMVKLEKIVSCSSEHPTYPAANLLQQSSENWKATWRCAKPGEMLAHVIFQLTEPAYITGV
DIGNYQSCVVIVSGSKLSEPDNWTVILNHKFMTNDEAANNKFRDQVQLFTKRELNPDTLT
IKFDRIKVTCMQSANLKVLFGLSYVILRSDPTIDLGLDVFGRFKLKQPHVLKTPLEMMKE
KLSDKTENEKTDYKTELREQIRRNSMENFAKCQEERKRPMKRPLLEKLEAGEADQVFGKT
NQNAKDKNESKDKIVKTNLGNTDNTLNEKMVTRTPFGDIVSSASSADNSKCNVTTTSQDS
SSLKKRHLSQLEDSSNATSNERSKHECYECCTNNSQDQPCKICQRLPLATVECSDSKKNN
SPKKSRKSFKQLFSDVTFSLSGYVNPQRDEIRRKALDMGARYVPDPNTTNKRCTHLICAF
KNTPKYQQFKNYAKIVSHTFIEECYNKRVRLSWRRYALDRKDKSQPESEEEIDGNQPESV
YDMDTDAESDC
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgatggtcaaattggaaaagatagtaagctgttcttcggagcatccgacgtatcccgct
gctaatctccttcagcagagttcggagaactggaaggccacatggcgatgtgccaaaccg
ggcgagatgttggctcatgtgatttttcagctcaccgaaccagcgtatatcacgggagtc
gacattggcaattatcagagctgcgtagttattgtttctggctcaaagttgtcggagcct
gacaactggacagtcatattgaatcataagtttatgacaaacgacgaggctgcgaacaat
aaattcagggaccaagtacaactgttcaccaagagggaactgaatccagacaccctgaca
attaaattcgatcggatcaaagtcacttgtatgcaatctgcaaatttaaaggtactgttt
ggattgtcgtacgttattttgaggtctgatcctacaatagatttgggtctggatgtattt
ggcagatttaaattgaaacagccacatgtcttgaaaacacctttggaaatgatgaaagaa
aagttgtctgataaaacggagaacgagaagacggattacaagactgagttgcgtgagcag
ataagaaggaattcgatggaaaattttgcaaaatgccaagaagaacggaagagacctatg
aagagaccgttgttggaaaagttggaagctggagaagctgaccaagtttttggaaagaca
aatcagaatgcaaaagataaaaacgaaagtaaagacaaaatagtgaaaacaaatcttggg
aataccgacaatactttgaacgagaaaatggttaccagaacaccttttggtgatatcgta
tcttctgcgagttctgctgataacagtaagtgcaacgtaacaactacgagtcaggattct
tcaagtttgaaaaaacgtcacttgagccaactggaggattcatcgaacgcaacgtctaat
gagaggagtaaacacgagtgttatgaatgttgtactaataattcgcaggatcagccatgc
aaaatttgtcaacgattgccactcgcgacggtcgagtgtagcgattcgaaaaaaaacaac
tctccaaaaaagtccagaaaatcctttaaacaactatttagcgatgtcacattctcactc
agcggatacgtcaatccacagagagatgaaatcagaaggaaggcgctcgacatgggcgcc
agatacgtaccagatccaaatacaactaataagagatgcacgcacttgatctgtgctttt
aaaaatacaccaaaatatcaacagttcaagaattacgcaaagatcgtctctcacaccttc
atcgaggaatgttacaacaaaagagtcagattgtcctggaggcgatacgctttagatcgg
aaggacaaatcgcaacctgagagcgaggaagaaattgatggcaatcaaccggaatctgta
tacgatatggacaccgacgccgaatctgattgttga

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