Ooceraea biroi (clonal raider ant): 105286239
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Entry
105286239 CDS
T05778
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105286239
09123 Folding, sorting and degradation
03018 RNA degradation
105286239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105286239
03041 Spliceosome [BR:
obo03041
]
105286239
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105286239
mRNA degradation factors
5'-3' decay
Lsm complex
105286239
Spliceosome [BR:
obo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105286239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105286239
NCBI-ProteinID:
XP_011349349
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All DBs
Position
13:8617868..8619494
Genome browser
AA seq
139 aa
AA seq
DB search
MLPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWKMPECY
VRGSTIKYLRIPDEVIDMVKEDIQMKSRGRGEMKGRGQGQRGRGGGRGTFGRGGRGPAPL
GRGGGTQVGNKAQNKPRPK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttacccctgactctgctgaaaacggcgcagaaccatcccatgctggtggaactgaag
aatggggagacttacaacggtcacttggttagctgcgataactggatgaacataaacctc
agggaggttatatgcacttcaagggatggcgataaattctggaagatgccagagtgctac
gtaagaggcagtacgataaagtatctgagaatacctgacgaagtgatagacatggtgaag
gaggatatacagatgaaatcccggggacgcggcgagatgaaaggacggggccagggccag
aggggacgaggcggtggaagaggtactttcggcaggggaggaagaggtccagcaccgttg
ggacgcggtggtggcacgcaagtcgggaacaaagcacagaataaaccaaggcctaaataa
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integrated database retrieval system
