Ooceraea biroi (clonal raider ant): 105286266
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Entry
105286266 CDS
T05778
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03430
Mismatch repair
obo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105286266
03460 Fanconi anemia pathway
105286266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obo03400
]
105286266
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105286266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105286266
NCBI-ProteinID:
XP_011349393
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Position
13:complement(8732464..8735109)
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AA seq
670 aa
AA seq
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MDEPVATTEKSKKIEAINKETIHHICSGQVVFDLAIAVKELVENSLDSGATAVDVKLTDY
GKTCISVSDNGGGVLEQDFEGLGLKHHTSKLRAFTDLTEVNTFGFRGEALSSLCALSQLS
VITRHSSSEHGFKLEFDQNGVLTRKEPCARERGTTVHVKNIFKNLPVRAKEFQKNLKKEY
TRTIQVLYSYCLVSTNIKLTCSNLITGKSPSLIVATRNTDNVLDNVNSVFGKKSLDGIIK
LELQSPDETILQEFNLPSDITIDFDWECYVSTCDHAMGRSSTDRQFFYVNGRPCDLTKVS
RLVNSVYHKYNNKQYPFVFLNIKLDRQCADVNVTPDKRTIFFTQERLILATLKFSLTARW
DKLQGNFTARTLTELSFGLKRTVSSNYVHPPAKRLQMSPSVSHITKDDIQTNIKLRKKPM
DIEMAISIATIREKLKEKENVKVPASTKRRIKYRVQMEGNQSEAEQELQKELTKDSFGTM
EIIGQFNLGFIIARLEDDLFIIDQHATDEKFRFEKLSNETKLKTQKLIVPKSLNFSALNE
TILMEHRETFENNGFTFNINELAEPGKKIELVGMPVSGYWQFGQEDIEELVFLIREAGNE
NKEKHMYRPSRVRQMLASRACRSAVMIGTALNTSEMQRLIMQMAQMHNPWNCPHGRPTIR
HLLSLLLINK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcccgtcgcgacgactgaaaagtcaaagaagatcgaagctataaataaagaa
acgatccatcatatctgctccggccaggtagtgttcgatctcgcaatcgctgtcaaagag
ttagtggagaacagtttagacagcggtgccactgcggtcgacgtcaagctcaccgactat
ggtaaaacgtgcatcagtgtcagcgacaacggcggcggtgtcctggagcaggattttgag
ggcctaggtctgaagcaccacacgtcaaagctgcgagctttcacagacctaacggaggtg
aatacgttcggttttcgtggcgaggcattgagctcgttgtgcgccttgtctcagctgagt
gtcatcaccaggcattcgtcgagcgagcacgggtttaaactggaattcgatcagaacggt
gtgctgacaaggaaagagccatgtgccagggaaagaggtaccacggtgcacgtcaagaac
atattcaaaaatttaccggtgagggcgaaggagtttcagaagaatctgaagaaggagtac
acgcgcactatccaagtcttgtacagttactgcttggtttccaccaacatcaagctcacg
tgctcgaatttgataacgggtaagtcacctagtctcatagtggctacgaggaacacggac
aacgtgctggacaatgtaaattctgtgtttggcaaaaagtctttggatggtatcattaaa
ctcgagctgcagtctccagatgagacgatactgcaagaattcaatctgcccagcgacatt
accatagatttcgattgggagtgctacgtgagcacttgcgatcatgcaatgggtcgttcc
tcgaccgaccgacaatttttctatgtaaacggtcgaccgtgcgatctcacgaaagtcagt
agattggtaaatagtgtgtaccataagtacaacaataagcagtatccatttgtcttcttg
aacatcaaattggatcgacagtgcgccgacgttaacgttacccctgacaaaaggacaata
ttcttcacgcaagaacgccttatattagcgacactgaaattcagtttaactgctagatgg
gacaagttgcaaggaaattttacagccaggaccttaacggaactaagctttggcttgaaa
aggacagtctcgtctaattacgtgcatccaccagccaaaagattgcaaatgtcaccttca
gtatcccatataacgaaagacgatattcagactaacattaaattaagaaaaaaacctatg
gatatcgaaatggcgataagtatagcaacaataagagaaaaattaaaagaaaaagagaat
gttaaagtacctgccagtacaaaaagaagaataaagtatagagtacaaatggaaggcaat
caaagcgaagctgaacaagagctgcaaaaagagttgacaaaagattccttcggcacgatg
gagataataggtcagttcaatcttggtttcataatagctcgtctagaggacgatcttttc
atcatcgaccaacatgccaccgacgaaaagtttcgtttcgagaaacttagcaacgaaacg
aagctgaaaacccaaaaacttatcgtgccgaaatcgctgaacttttccgcgttgaacgaa
acgatactcatggagcatagagagacatttgagaataatggttttaccttcaacattaac
gagctagctgagcctggcaagaagatagaattagtaggaatgcctgttagtggttactgg
caatttggtcaggaggacatagaagaactagtatttctcatcagagaagcaggcaatgaa
aacaaggagaagcacatgtatcgtccaagtcgggtcaggcaaatgctggcgtcgagagcg
tgtcggagcgcagtcatgatcggtacagctttgaacaccagcgagatgcagaggctgata
atgcagatggcacaaatgcacaatccatggaactgcccacatggaagaccgactataagg
cacctgttgtccttattgttaataaacaagtaa
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