Ooceraea biroi (clonal raider ant): 105286318
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Entry
105286318 CDS
T05778
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obo03036
]
105286318
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105286318
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105286318
NCBI-ProteinID:
XP_011349491
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Position
13:complement(9154787..9162151)
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AA seq
1368 aa
AA seq
DB search
MATKKYDDGVSDDTSGSDFDDEEDPDKIEVPGGGKDLATAAGIASIKDEKQNMDLPVSPL
DKTQGALSALNQKFGNKIPGGLVTKTAAPGYEMVRVGGSQGAAPGFVNANQFNQLSQLAA
SGYGFPPGLATLTGFNPAAFLQSSMDMNALMGSFMGMPGMNMGVNPFLQFLNQSGIHPNW
SGLSGKTVSQMWMNSGDPTKLMQPNVPEEEEVDDEDMGVAETYADYMPTKLKLGRKHPDP
VVETASLSSVEPTDVWYKVSIPEETIRSGALSALQLESITYASQQHEHLLPDDTRAGFLI
GDGAGVGKGRTIAGIIFENYLKGRKRAIWVSVSNDLKYDAERDLKDIGAGKIDVHALNKF
KYAKISSAVNGNVKKGVIFSTYSALIGESSQSGGKYKSRLKQLLQWCGEDFDGLIIFDEC
HRAKNLCPTGSSKPTKTGLTVLELQNKLPKARVVYASATGASEPRNMAYMVRLGMWGEGT
PFPEFTDFITAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVAFKIEEVPLSKDFTKVY
DHSVRLWVQAMQRFQEAAELIDAENRMKKTMWGQFWSSHQRFFKYLCIAAKVKHAVAVAR
EAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGVLQTLVEKHFPAPDRNRIQ
RLLGLEPPKLRLDDDDYMDGAGGSAGGSKRKPIRQAAQRATKKVRAWSSEEEISDEERNC
AHSSGSEFKLTGSESEDEQHTDEESNVSSDFNPFFSDSDSDADPWDRRKKKGSKKQKKPQ
KKRLSTQDKIQSMLVEKQSSNRNKRNGDTGISGPMGVISGSVPRSQAPPRDAIERACSMK
EELLSQIETLGERLPPNTLDQLIDELGGPENVAEMTGRKGRVVQTEDGAIQYESRSEVDV
PLETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHITLELPWSADRAI
QQFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESLGALTHGDRRATETRDLSQF
NIDNKYGRTALEATMKAIMGYEPPLVPPPQDYHGDFFKDVADALVGVGLICNSENAPGVL
TLDKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIIGQAKKTGRFDMGILDLGTSGE
NVRRVRLFRFLRKHATGKAPTELHVVHVERGMSWSEATDKCSELIAPKEGFYLSHQIRNG
KQTAILAMMVEGGKKKTESKKDQLYMVHRPNTGLQLRQETLGELEKKYKKVSTDEAEPHW
TQQYEASVDTCSHAYWSGNCKNANIGMDCEVGLRRRSYNVLAGSVLSVWSRVENVLAARS
GHNSKMQVVRLRTDEGLKIVGTLIPKSCMEPLRQALSSDAENTEELTF
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaaagtatgatgatggagtgagcgatgataccagtggcagtgatttcgat
gatgaggaagaccctgataaaattgaagtacctggtggaggtaaagatcttgcaactgct
gccggaattgcaagtatcaaagatgagaaacagaatatggatctaccagtgagtcctttg
gacaaaacacaaggggcattaagtgcgttaaatcaaaaatttggaaataaaattcctggt
ggtttagtgacaaagactgcagcaccaggttatgaaatggtgcgtgttggtggctctcag
ggtgctgctccaggtttcgttaatgcgaaccaatttaatcagttgagtcagttggcagct
agtggatatggttttccaccgggactggctactctcacgggattcaatcctgctgctttc
cttcagtcgagcatggacatgaatgctttgatgggtagctttatgggtatgcctggaatg
aacatgggagttaatcctttccttcaatttcttaatcaaagcgggattcatcccaattgg
tcagggctttcaggaaagaccgtgtcacagatgtggatgaattccggcgatccgacgaaa
ctgatgcagccaaatgtaccggaggaagaagaggttgacgacgaagatatgggtgtcgcc
gagacttatgccgattacatgccaacaaagctcaagcttggacggaagcatccggatccc
gttgtcgaaacggcgtccttatcgagcgtcgagccgacggacgtttggtacaaggtctcc
atcccggaggaaacgatacgatccggcgcgctctctgcgctccaactcgagtctatcacg
tacgcgtcccagcagcacgagcatctgctgcccgacgatacacgggctggttttctgatc
ggcgacggtgcaggtgtcggcaagggtagaactatcgccggcataatattcgaaaattac
ttgaaaggtcggaaacgtgccatctgggtgtccgtgtcgaatgatctcaagtacgatgcc
gagcgtgatttgaaggatataggtgcaggcaagatcgacgtacacgcgttgaacaaattc
aagtatgcaaaaatttcgtcggcggtaaacggcaacgtgaagaaaggcgtcatcttcagc
acgtattccgcgttaattggcgaatcgtcgcagagcggggggaaatataagagccgatta
aagcagttgttgcagtggtgcggtgaagatttcgatggtctgataatcttcgacgagtgt
caccgggcgaaaaatctctgccctaccggtagctcaaaacctacgaaaacaggcttaacc
gtcttggagctgcaaaacaagcttccgaaagctagagtcgtatatgccagtgcgactggt
gcttccgaaccccgtaatatggcctacatggtgcggctgggcatgtggggcgagggcacg
cctttccccgagttcaccgacttcatcaccgcagtggagaaacgcggtgtcggcgcgatg
gagattgtagctatggacatgaagctgcgcggtatgtacatcgcacgacaattgagcttc
cacggcgtggcctttaagatcgaggaggtgcccctttccaaggactttaccaaagtttac
gatcactcggtgcgattgtgggtgcaagcgatgcagaggttccaagaagcggcggagttg
attgacgcggagaatcgcatgaagaaaaccatgtggggtcagttttggtcctcgcatcaa
cgtttcttcaagtatctctgcattgccgcgaaagtgaaacacgcggtggcggtggctcgc
gaagcggtcaaatgcggcaaatgcgtggtgataggccttcagtctaccggcgaagcgcgc
actttggagcagttggagcgcgacgatggcgaactcagcgattttgtttccaccgcaaag
ggcgtcttgcagacactggtggagaaacactttccagcaccggatcgtaatcgtatccaa
cgtcttctcggtttggaaccaccaaagctcagattagacgatgacgattacatggatggt
gctggcggttccgcgggaggtagcaaaaggaagccgatccgccaggcggcacaacgtgca
acgaaaaaagtgcgcgcttggtcatcggaggaggagatatcggacgaagagagaaactgc
gcccacagctctggctcggaattcaaattgaccggtagcgagagcgaggacgagcaacac
accgacgaggagagcaacgtcagttccgacttcaatccgttcttcagcgacagtgactcc
gacgccgatccttgggaccgacgaaagaaaaagggaagcaaaaagcagaagaaaccgcag
aagaaacggttgagcacgcaggataagatccaatcgatgctcgtggagaaacagtccagt
aacaggaataaacgtaatggcgacacgggaatcagcggtcctatgggcgtcataagtggt
agcgtgccccgtagccaggcaccgcccagagacgcgatcgagagagcttgcagcatgaag
gaggagctgttgtcgcagatagagactcttggcgaacgattaccgccaaacacgctggat
caactgatagacgagctcggcgggccggaaaatgtcgcggagatgacgggtaggaaaggt
cgtgtcgtgcaaacggaagacggtgcaatacaatacgaatccaggtcagaggtggacgtt
cctttggagacgttgaatttgacggagaaacagaggtttatggacggagagaaaaccgta
gcgattatctctgaagcagccagcagcggcatatcgttacagagcgacaggcgagcgagg
aatcaaatgcgacgtgtgcatatcacgctcgagttgccgtggagcgcggacagagcgata
cagcagttcggacgaacgcatcgatctaaccaagtcaatgcaccggagtacatattcctc
atatcagacttggccggagagaggcgcttcgcctcgatcgttgcgaagcgtctggagagc
ctaggtgcgctgacgcacggcgatcgtcgtgcgacggagactcgagatctctcgcaattc
aatatcgacaacaagtatggccgtacggctctggaagcgacgatgaaagctataatgggg
tacgaaccaccattggtaccaccgccgcaagactatcacggtgatttcttcaaggacgtg
gctgatgcgttagtgggcgtcggtttaatttgcaacagcgagaacgcgcccggcgtgctc
accctcgacaaagactacaataacatgtccaagttcctgaatcgcatcctcggtatgccg
gtggacctgcagaatcgtctgtttaaatatttcaccgacacgctgaacgccattatcggc
caggccaagaagaccggccgtttcgacatgggtattctcgatctcggcacatcgggcgag
aacgtccgtcgggtaagattgttccgatttctgcggaaacacgcgaccggcaaggcacca
acggagctgcacgtggttcatgtcgagcgcggaatgagctggtccgaagccacggacaag
tgctcggaactgattgcgcccaaagagggcttctacttgagccatcagatccgtaacggc
aagcagaccgccattctcgcaatgatggtggagggcggcaagaagaaaaccgagagcaag
aaggatcaactgtatatggtgcacaggcccaatacgggactgcagctgcgacaggagact
ctaggtgaactggagaaaaaatacaagaaagtgagcacggacgaggctgaaccgcactgg
acgcagcaatacgaggcttctgtagacacgtgttcgcacgcgtactggagcggcaactgc
aaaaacgccaatattggcatggattgcgaggtggggctaagaagacgttcctataatgtg
ttagctggttcggttctgagcgtttggagccgcgtggaaaatgtgctcgccgcacgatcc
gggcacaattccaagatgcaagttgtacgactacggacggatgaaggactgaagattgtc
ggaacacttatcccgaaatcttgtatggagccgttgcgccaagcgctttcttccgacgcg
gaaaacacggaggaactgacgttttga
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