Ooceraea biroi (clonal raider ant): 105286323
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Entry
105286323 CDS
T05778
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105286323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obo03032
]
105286323
03400 DNA repair and recombination proteins [BR:
obo03400
]
105286323
DNA replication proteins [BR:
obo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
105286323
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
105286323
BRCA1-C complex
105286323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
BRCT
PTCB-BRCT
RTT107_BRCT_5
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
105286323
NCBI-ProteinID:
XP_011349501
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All DBs
Position
13:complement(9211554..9215275)
Genome browser
AA seq
742 aa
AA seq
DB search
MWCLKGREGICVYVTPNQKQTFGKSLSDIKLEGDPTISRLHAVISVESIEESDTTPYKCV
ISDLSKYGTFVIRDGQKKKLLINEKCTLKAGDTVQFGLKQTTFVVSCYSFVIAKSSLDKK
AAESLTSVVHLLGGRLAETWEDSCTHLTVSENILFTTKLACALASAKPIVTIAYWEAIRL
AVQESKELPGIENFLPMIKEEWLKASSRLLVPNEKRRALFKGLAFVHFCAKQYFTCSPLI
SAAGGKSCVYPTKKPLTPRDLTAKNAVVVQQPASDSSQFTCQIIEADYPIIYRKLQAIKR
RMISDTEIPLAILYCSTEIYCNPKFEFATFLELNTQTFPSSDIVIIEDTQDIVNRINKAD
GRSKENVVSEICVSQSNENAVSSTSVCPLGENARRGTCDSNRSDIATRTTRNADQRTVTR
KVIPEICESQGNDQGTSKNVGPHIGDEQRNIMPNIFSKKKVQKQLEIIPESCCSAGREAS
GTVSGKSDREQARIVSEIFEPDEVNVVEDLAARKICRNAKSSEKRGILTVEKGNDGTLEK
DAVAPVAITTNQQRENYVISKKTNNSHCVKNNLSLGKNGSSNADYDKSDRANWQISKKLK
TSRGPRIVSIEKINHSKINTDWKRKKALTEGRTKIQESSNSLKERKLDPVCSVGRPQEDE
RTKKNRIREGDKNREEPRKTVANWYEKYLKQELTNEILRRDAPRGKTFTKMPVVIPERMP
RMDNHVSRQPRDFVKKMIIKTD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgcctcaagggacgcgaaggcatttgcgtgtatgttacgccaaatcagaaacaa
acctttggtaaatcgctgagtgatataaaactagaaggagaccctacgatcagcagatta
cacgcagtcatttccgtggaatcgatcgaggaatcggataccacaccatataaatgtgtc
attagtgatttgtccaagtatggaacgtttgtcataagagacgggcaaaagaaaaaattg
ctgataaatgaaaaatgtaccttgaaagctggcgacacagtgcaatttggcctaaagcag
actacttttgttgtgtcgtgttattcatttgtgattgcaaaatccagcctggataaaaaa
gctgcagagagcttaacaagcgtggtgcatcttctgggaggaaggttggctgaaacttgg
gaagattcttgcacacacttgacagtgtccgaaaacatcctgtttactacaaaattggct
tgcgcattggcctctgccaaaccgattgtgacaattgcatattgggaagcaatacgtcta
gctgtccaagaatcaaaggaattgccaggtatcgaaaactttctgccaatgataaaggag
gagtggttgaaagcgtcttcgagattgcttgtaccaaacgagaaacgcagagcgctgttc
aagggcctggcattcgtgcatttctgtgcaaagcaatacttcacgtgctcgccattgatc
agtgcagcaggtggcaaatcgtgcgtgtatcccacaaagaaacccctcactcctcgagat
ctcactgcgaagaatgcggtcgtcgtacagcagcctgcgagcgactcgtcgcaattcacg
tgtcaaataatcgaggctgattatccaatcatctatcgcaagctacaagccatcaaacgc
agaatgatctccgataccgaaattcccctcgcgattttatactgcagcacagaaatttat
tgtaatcctaaattcgaattcgccacgtttctcgagttaaacactcaaacgtttccttct
tccgacattgtgataatcgaagacacacaggacatcgttaacagaattaataaggctgac
ggacgcagcaaggagaacgtcgtatccgagatttgcgtttcgcaaagtaacgagaatgct
gtctcgagtacgagtgtctgtccacttggcgagaacgcgcggcgaggtacctgtgactcc
aacagaagcgatatcgcgacgagaaccacgcggaatgctgaccaaaggacagttacgcgc
aaggtaattcccgagatttgcgagtcccaaggtaacgaccaaggtacctcgaagaacgtc
ggtcctcatatcggagacgaacagagaaatatcatgcccaacatattttctaaaaaaaaa
gttcaaaaacaactcgaaattattcccgagagctgttgttccgcagggagagaagcgagc
ggtaccgtttccggtaagagcgatcgtgaacaagctcgaatcgtttctgaaattttcgag
cctgacgaggtaaacgtcgtcgaggatttggccgcgcgaaaaatatgcagaaacgcgaaa
tcgtcagaaaagagaggtattcttacggtggagaaggggaatgatggtactttggagaaa
gatgctgtagctccggttgcgataacgaccaatcaacaacgagaaaactacgtgatatct
aaaaagactaataattcacattgtgtcaaaaataatttgtcacttgggaaaaacggatct
tccaacgctgattacgataaatctgatcgcgcgaactggcaaatttcgaaaaagttgaaa
acttcaagggggccacgaatcgtatcgatagagaagattaatcacagcaagattaacact
gactggaaaagaaaaaaagcgttgacggaaggtcgtaccaaaattcaagagtcatcgaat
tcgttaaaggaacgcaaattggatccagtctgctctgtcggaagaccccaagaagatgag
agaacgaagaaaaataggatacgagagggagataaaaacagagaagaacctcgaaaaacg
gtagccaattggtatgaaaagtacttgaagcaagagctcacgaatgagatacttcggaga
gatgcaccacgtggtaaaacatttacaaagatgccagttgtgattccggagaggatgccg
aggatggacaaccatgtctctcgacagccacgtgattttgttaaaaaaatgattattaaa
actgattaa
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