Ooceraea biroi (clonal raider ant): 105286469 Help Entry 105286469         CDS       T05778                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism obo  Ooceraea biroi (clonal raider ant) Pathway obo03040   Spliceosome Brite KEGG Orthology (KO) [BR:obo00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105286469  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:obo03019]     105286469    03041 Spliceosome [BR:obo03041]     105286469 Messenger RNA biogenesis [BR:obo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      105286469 Spliceosome [BR:obo03041]  Complex B   Other components    Prp19-related factors     105286469  Complex C     105286469 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_8 TPR_2 TPR_15 TPR_12 DHR-2_Lobe_A RPN7 NRDE-2 PPR Mad3_BUB1_I TPR_10 Microp_apicomplexa_6 ARM_TT21_C SNAP Motif Other DBs NCBI-GeneID:  105286469 NCBI-ProteinID:  XP_011349742 LinkDB All DBs Position 5:complement(15635096..15639798) Genome browser AA seq 844 aa AA seqDB search MLERKDDEGNLYAFNEEDLPYEEEILRNPYSVKHWQRYIDHLKNTKSKNLNVVYERALKE LPGSYKLWYNYLRQRVSQLKGRCITDLLYEDVNNAFERALVFMHKMPRIWMDYCTLMTEQ CYITRTRQVFDRSLRALPITQHHRIWPLYIDFLKKHDVYETAVRVFRRYLKLAPEDTEEY IEYLISIGRLDEAALKLAQIVNQDDFVSKHGKSNHQLWNELCDLISKNPSKIKSLNVDAI IRGGLRRYTDQLGPLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE ELSLKKLLEEATENPTEEDDIKLELRMARLENLMERRLLLLNSVLLRQNPHNVAEWHKRV KLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVAFGKFYEENGQVEDARVVFEKATHV PYTKVDDLASVWCEWAEMEIRHDNCNEALKLMHRATTMPARKVAYHDETETVQMRLYKSL KVWSMYADLEESFGTFRTCKAVYDKIIDLKIATPQIIINYGLFLEENKYFEEAFRAYEKG IALFKWPNVYDIWNTYLTKFLKRYGGTKLERTRDLFEQCLEHCPSKYAKTLYLLYAKLEE EHGLARHAMSVYERATNAVLPEERFDMFNIYIKKAADIYGVPKTRQIYEKAIEVLNDENT REMCLRFAEMETKLGEVDRARAIYAHCSQICDPRVTSNFWQVWKEFEVRHGNEDTMREML RIKRSVQAMYNTQVNMMSAQMLNNASNQVSDIPVDAMRLLDSKVTSNTESVTSMKAGIKF VRGVTEKDGKAESHVNNPDEIDIDMDDEDENENDAEMEEDVPIEKQTIPSQVFGSLKAAE IEDN NT seq 2535 nt NT seq  +upstreamnt  +downstreamnt atgttagaacgcaaagacgatgaaggaaacctgtacgcctttaacgaggaagatttacca tatgaagaagaaattttacgaaatccatattcagtgaaacactggcaacgctacatcgat catctcaaaaacacaaaaagcaaaaacttaaatgtagtttatgagcgggcattgaaggaa ctcccaggcagttataaactttggtataactatcttcgacaacgcgtgagccagttaaag ggccgttgcataacagatctgttatatgaagatgttaacaacgcctttgagcgtgctttg gtatttatgcacaaaatgccacgtatatggatggattattgtacactaatgactgaacaa tgttatattacacgaacacgtcaggtgttcgatcgttctctcagagcacttccaattaca cagcatcatcgtatatggccgttgtacattgatttcttaaagaagcatgatgtctacgag actgctgtccgagtctttaggagatatttaaagttggcgccagaagatacagaggagtac atagaatatctgatatcgatcggaagacttgacgaggctgctctaaagcttgcacaaatt gtcaatcaagatgatttcgtgtcaaagcatggcaagtccaatcatcagttgtggaatgaa ttgtgcgatttgatctcaaaaaatccatccaaaataaaatctctgaacgtcgatgctatt attaggggcggtttaagacgttacacggatcaattgggacctttatggaattcactagca gactactatgtccgaagtggtctctttgaaagagcaagagatatctatgaggaagctata cagactgttactactgttagagattttactcaggttttcgatgcctatgcacaatttgag gaacttagtctgaagaagctgctagaagaagcaacggaaaatcctactgaagaagacgac ataaaattagaattgagaatggcacgattggaaaatctcatggaaaggagattattgtta cttaattctgtgctgctacggcagaatccgcataatgttgcagaatggcacaagagagtc aagctttatgagggacagccacatgagataattaacacgtatacagaggcagtgcaaaca gtgcagccacagttagcagttggtaagttgcatacgttgtgggttgcatttggcaagttt tatgaagaaaatggacaagtagaagacgcgagagtggtattcgaaaaggcaactcatgtt ccatacaccaaagtagacgatcttgcttccgtatggtgcgaatgggcagaaatggaaata agacatgacaactgcaacgaagctctgaagcttatgcatcgtgctactacaatgccagct aggaaagtagcgtatcacgatgaaacagagacagtacaaatgagattatacaaatcctta aaagtatggtccatgtatgcagatttggaagaaagttttggtacatttaggacttgcaag gcggtatacgataaaataatcgatttgaaaattgcgactcctcaaattattatcaattac gggctgttcttagaagaaaacaaatactttgaggaagcatttagggcatatgaaaaagga attgcgttgttcaagtggcctaatgtttatgacatttggaatacatatcttacaaaattt ttgaaacgctatggtggtacaaaactggaacgtaccagggatctctttgagcaatgtttg gaacactgtccctcaaaatatgccaaaactttgtatctgttgtacgcaaagctggaagaa gaacacggcttagcgagacacgctatgtcggtgtatgaacgagcaacgaatgcggtcctc ccggaagaacgatttgacatgttcaacatatacataaagaaagctgcagacatatatgga gtgccgaaaactcgacagatatacgagaaggcgatagaggtcctaaatgatgagaacacc agagaaatgtgcttaagatttgcagaaatggagaccaaattgggagaggtggatagagcg agagcgatatacgcacactgcagtcaaatatgcgatccaagggtaacatctaatttctgg caagtttggaaagaattcgaagtcagacatggtaacgaagacacgatgcgcgaaatgctt cgaattaagcgcagcgtgcaagctatgtataacactcaagtgaacatgatgtctgcacaa atgttgaataacgcatctaatcaagtgtcggatatccccgtggacgctatgcgcttgtta gatagtaaagttacgtcaaatacagaaagtgttaccagcatgaaagcgggtattaagttt gtacgtggtgtaacggagaaggacggcaaggcagaatcgcatgtgaataatccagatgag attgacatcgacatggatgacgaagatgaaaatgaaaacgatgcagagatggaagaagat gtcccaattgaaaaacaaactataccatcacaagtatttggtagcttaaaagcagccgaa atagaggataattga

DBGET integrated database retrieval system