Ooceraea biroi (clonal raider ant): 105286620
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Entry
105286620 CDS
T05778
Name
(RefSeq) syntaxin-binding protein 5 isoform X3
KO
K08518
syntaxin-binding protein 5
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105286620
Membrane trafficking [BR:
obo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105286620
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
105286620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_VPS8
WD40_like
Beta-prop_TEP1_2nd
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
105286620
NCBI-ProteinID:
XP_011349979
LinkDB
All DBs
Position
14:2274430..2307402
Genome browser
AA seq
1349 aa
AA seq
DB search
MKKFTIKGVLDGFRSSVPQPVKPDQEIVENLRPEHFQVKKTFRHGFPHQPTALAFDPVQR
LLAIGTKSGSLRILGSPGVDTHVKHEECAAVLQLQFLINEGALVSATADDTLHLWNFRQK
IPQVVQSLKFQRDRITCIHLPLQSKWLYVGTERGNIHILHIETFVLSGYVINWNKAIEVS
RKTHPGAVVHLSDNPLDLSKILIGYQTGQIVLWDLKSKTADYRCQTDEQLKSITWHHEGK
QFMCSHTNGSLSTWTVRQLKPTSVTFPHAKTTNGEPEPCKPIQKVEWKLSRSGEAYIIFS
GGLACDVTGRTPSITIIQGKTTTVLEMEHTVIDFVTLCDNPWASDFQDPYAVVVLLQNDL
VVIDLLTPGFPCFENPYPMNIHESPVTCCAYFADCPSDLVPAFYSVGSKSQKKTGFSEKE
WPISGGEWSPNSSSYNEIILTGHADGSIKFWDASAGTLQILYKLKTAKLFEKTKTHSIDS
EEDPLAIQLIYLCPESRKLAIAGSGKHVVLFKFKKVESMSEVVTLEICLSVDSSREAENS
PDHESPATGNTVGNVESKITDFNHPLKVKTGLQKRAAGFQATLICLTTAPSGEQPENITS
LSLNSSYGLLAYGNESGLVIIDIVQKISLIVLNTSDLGGSDPQRVLRSPKRQDDSKRENE
DKARSPSTDQSQRESVMESEAIVTRITDSTQQQCLRSESQTGNNNDRPSGEESTSEANKT
GNLSNGDECQKSQGWKGFSLKRQLSKVDLKIKNTFTPSLVSSQNGSSSLGLMQVPQCQQV
GSDAGNQKSSTFYCNVSETASTSRSLSPVESIDSESSLSPDNQSSGCESPQIDDRKRDIQ
EARSPTESENEKTTMSNISVKTEAVRPMNLSLPEHELKPPRLKRIAKIKQAKRDNRLLSV
PNLKFSKNETTVCDLRCEESATSESFTCNLIRRFSRVDKFDGSFQRSRSSSMSSLENITT
ETISCLTFADSYTKKNDTNGMPTLWIGTSLGSVQTVVFNTPAHGERNAHPVVVSTCNGST
FKLKGCILSTSFLDCNGALIPYLYESWKDENTDGKDRNKSQGKGTNSRMPPSMNTQISGD
NFEDRQFVVLASEKQARVVALPSQNCVYRQQLAETHIVIKAEVTSLKDNVCLVCYVSNGH
ITTYSLPSLRPLIDVDFLPLIDLSFQTTKHGIVDPMLSIWGHQLFVNGDTDQIAKTLCFS
NRGHGLYLSSPMEIQKFSVSSEFCAELTEMMGDLFIGHDMPGPPKESFFKGLFGGGSRSL
DREELFGESSGRASRTVAKHIPGPNEALRERVSSATGEVNMAHQMVVERGEKLSQLEERT
GRMMSEAENFSQSAHGLMLKYKDKKWYQL
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcacgatcaagggtgtcctcgatgggttccggtcgtcggtcccgcagccc
gtcaagcccgaccaggagatcgtcgagaacctgaggccggagcactttcaagtgaagaag
acattcagacacggcttcccgcatcaaccgacagcgttggcattcgacccagttcaaagg
ctcctagctattggcactaaatcaggatccctcaggattctgggtagtccgggcgtagat
acgcacgttaagcatgaggaatgcgcggcagtcctgcaattacagtttttgatcaacgaa
ggagcattggtgtccgccacggcggatgacactttgcatttatggaactttcgtcaaaaa
ataccgcaagtggtgcagagcctcaagtttcaaagagacagaatcacttgcattcaccta
ccgctacaaagtaaatggctgtacgtcggaacggagcgaggaaatattcacatattacat
atcgaaacattcgttctatccggatatgtaattaattggaacaaggctattgaagtatct
agaaagacccatcctggtgctgtagtacacttgagtgataatcctttagatttgagcaag
atacttatagggtatcagacagggcaaattgttctgtgggacttgaaaagcaaaactgct
gactacaggtgtcaaacggatgaacagttgaaatccataacatggcatcatgaaggtaaa
cagtttatgtgcagtcacacgaacggttctctttcgacttggaccgttcgacaattaaag
ccaacaagcgtgacattcccacacgcaaaaactaccaatggcgaacctgaaccatgtaaa
cccattcagaaggtagaatggaaattatcgagatcaggggaagcgtatatcatattttct
ggtggactagcgtgcgacgtcactggaagaacacctagtataacaattatacagggaaaa
actactacagttctcgaaatggaacatacagttatagattttgtgacgctatgtgataac
ccatgggccagtgattttcaagatccgtatgctgttgttgttctactacaaaatgacttg
gttgtgatagatttattaactcctggattcccctgtttcgagaatccatatcccatgaat
attcacgaatctcctgtaacctgctgtgcgtatttcgctgattgtccttcggatttggta
cctgcattttactccgttgggtccaaatcgcaaaagaagaccggttttagcgagaaagaa
tggcctatttccggtggagaatggagtcccaattctagcagttataacgagattattctc
actgggcacgctgatggcagtataaagttctgggacgcttccgcgggaacgttacaaatc
ctttacaaactaaagacagcgaaacttttcgaaaagactaagacgcatagtatagattct
gaagaggacccattagcaattcaacttatttacctttgtcccgaaagtcggaaattagct
atcgcaggaagcggcaaacacgtcgtattgtttaaatttaaaaaggttgagagtatgtct
gaagtagtgactttggaaatatgcttatcagtggattcatcaagagaagcagaaaattca
ccggatcatgagtctccagcaaccggaaacactgtgggaaatgtggaatcgaagatcaca
gattttaatcatccgcttaaagtcaagacgggtttgcagaaaagggctgctggttttcaa
gcgacattaatttgtttaacaacggcacctagtggagaacaacctgagaatataacatcc
cttagtttaaactcttcatacggcctattggcctatggaaacgaatcaggcttagtgata
atagacatcgtgcagaagatttcgttaatcgtattaaacaccagcgatcttgggggatct
gatccgcaacgtgttttacgcagtcccaaacggcaagacgattcgaaacgagaaaatgaa
gataaagcgagaagtccgagtacagatcagagtcagcgagaatccgtgatggaatccgag
gcgatagttacaaggataacggattcgactcagcaacagtgtcttcgcagtgaaagtcaa
actggaaacaataacgatagaccgagcggagaggaatcaacaagcgaagctaataaaaca
ggaaacctttctaacggcgacgaatgtcagaaaagtcaaggttggaagggatttagtctc
aagagacaactgagcaaagttgatctgaagatcaaaaatacttttacaccgtccttggtg
tcttctcagaatgggagctcgtcattggggctcatgcaagtaccccaatgccagcaggta
ggcagcgacgctggtaatcaaaagtcttccacattttactgcaatgtcagcgaaacggcc
agcacgagtcgttcattatcgccggtcgaaagtatcgactctgagtcttcattgtcaccg
gataatcagtcttcgggatgtgagagtccccagatcgatgacaggaagcgagacatccaa
gaggctagaagcccaacggaaagcgaaaacgagaaaacaacgatgagcaatatcagtgta
aaaaccgaggcagtgagaccgatgaacttatctttacccgaacacgaattaaaaccaccg
aggctgaaacgcatcgccaaaatcaagcaagcaaagagagataaccgtttgctctccgtg
ccaaatctgaaattttccaaaaacgagacgaccgtttgtgacctaaggtgcgaagagagc
gctacatccgagtcgttcacctgcaatcttataagaagattcagtcgggtagacaaattc
gacggctctttccaacgatcaaggagctcgagtatgtcgtccctcgagaacattactaca
gaaaccataagctgccttacatttgcggattcttatacgaaaaaaaacgatacaaatggc
atgccaactttgtggattggcacgtctctgggatctgtacagactgttgtatttaataca
cctgcccacggcgaacgtaatgctcatccagtggttgtgtctacttgtaatggatctact
ttcaaactcaagggttgtattctatccacgtcgttcttagattgcaacggagctctgatt
ccatacttgtacgagtcttggaaagacgagaacacagatggcaaagatcgaaacaagagt
caaggaaaaggtacaaatagccggatgccaccgtcgatgaacacgcagatcagcggggat
aatttcgaagatcgacaattcgtcgtgctcgcatcagaaaagcaagcaagagttgtggcg
ttaccctcccaaaattgtgtatatagacaacagctagcggagactcatatcgtaattaag
gcggaagttacatctctgaaagataacgtctgcctggtatgttacgtctcaaacggtcac
atcacaacgtatagtctgcccagtcttagaccactgatagacgtcgattttctacctctt
atagacttgagttttcagaccacaaaacacggcattgtagaccccatgttgtccatatgg
ggtcatcaactctttgttaatggcgataccgatcagatcgcaaagacgctttgcttcagc
aatcgaggtcacggtttatatctgtcatcgcccatggaaattcagaaattctccgtttca
agtgaattctgcgctgaattaacggaaatgatgggtgatttatttattggtcacgatatg
ccaggaccgcctaaagaaagcttcttcaagggcttattcggtggtggttcgagaagtctc
gaccgagaggagttgttcggtgaatccagcggtcgcgcgtcacgcacagtagcgaaacac
attccaggaccaaacgaagctctccgcgagcgagtctccagcgcaacgggtgaggtgaat
atggcacatcaaatggtcgtggagcgcggcgagaagctatcgcagctcgaggaacgaacc
gggcgcatgatgtcggaagccgaaaacttttcgcagtccgctcacggattgatgctcaag
tacaaggacaagaaatggtaccagctatga
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