Ooceraea biroi (clonal raider ant): 105286723
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Entry
105286723 CDS
T05778
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105286723
Spliceosome [BR:
obo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105286723
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
CBM-like_CFAP184
Motif
Other DBs
NCBI-GeneID:
105286723
NCBI-ProteinID:
XP_011350171
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All DBs
Position
1:10658843..10672861
Genome browser
AA seq
1082 aa
AA seq
DB search
MALLQCSLMRFRGIGIRHGRQRALGEDRSSRVRLTPEHAHGTANERTRARTCRIPSHVRT
SLRRRTSLSLLTPDIYASRHDTQPAAKYRRAVYPHSTTPGEPEIAERPTQATSAAAYQTG
QAGYAVTPAATAATYTQRPAAAAATGYETYQAAAAAAATGTTYAAANPGTVAQTYDYGYG
RAAPAATYDATKTYYQQPAAAAATYTTTETHYQAAKPAYSTTSAYTGTARQATTTGQAKT
YQASSTAYQQSNPTQSATYSSGYTAPATPAAAPSTATNKTASTTYSGYDAALYSAATMYV
AQQSANSNSTNQKTGGWQGCYGRKGFGAGGGGMKTMRPKQPPKPQQLHYCDVCKISCAGP
QTYREHLEGQKHKKKEASLKVPQQPPARGAGNSLRCELCDVTCTGNDAYAAHIRGAKHQK
VVKLHTKLGKPIPSADPTVLNPKPAAAAKAAATKKPTVTATPKINFVASGNLGTVNQNQS
VEVKQEEPAAEETVEEATVDEKDIQPVGQEYIEENKSEDGKIISFNCKLCECRFNDPNAK
DMHMKGRRHRFAYKKKVNPDLVVDMKPSLKQRKMLEEKLRRQQMRDEYLRRREEINQLGP
IGPMLDEEMLYWEERRRYEEECEYYEWFRRYGRGPGAPPIPRPFAGPPPMMMYAGPQRRP
DSSDDKHVLAHHTTIYPKEQELLAVQKIVSHTEKALKFVSDALAEASKKNTPVNANATAA
APAAAGAAQANADTLKKEEPDKKKAATPQKEDGSDGNLFSFQKEKEDSRILRGVMRVGNL
AKGLLLSGDNHVCLVVLCAEKPTRTLLNKVAEILPGELKNVAPEETYNVGKHPESAALTV
SGGTVTVSVTLTSPLMRETPKSTAAADNAGQQQQEAAQLQTTPAAPTVTKPDPPDVLPKA
KCLEALAALRHAKWFQARATSLQSCVMVIRIMRDLCNRVPTWGPLNPWALELLTEKVIST
AGAPLSPGEALRRLLECVAGGILLPGSPGLSDPCEKEPVDAIGNMTSQQREDITASAQHA
LRLVAFRQIHKVLGMEQLPPPKFKGRYARKRRRDNSNGEGTDSEASKKDKKAEEIKMETD
SK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcattactgcaatgttctttaatgagattccgaggaatcggtattcgacatggccga
cagagggcgctgggggaggatcggagctctcgcgttcgtctcacgcctgaacacgcacac
ggcacggcgaacgaacgaacacgggctcgaacgtgtcgcataccatcgcacgtacgcacg
tccctccgtcgacgaactagcctctccctgctcacgccagacatatatgcgtcgcgtcac
gacacgcaaccagccgcgaaatatcggcgggcggtctacccacactccactacccccggc
gaaccggagatagccgagagacccacgcaggcgaccagcgctgcggcttatcagaccggg
caagcgggatatgcggtaaccccagcagcgacagccgcaacatacactcaacggcctgct
gccgctgctgctaccggttacgaaacgtatcaggcagccgctgctgcagccgcgactggg
acgacatacgcagctgccaaccctggtaccgtggctcaaacttacgactacggttacgga
cgagctgccccagcagctacatacgacgctacaaagacctactatcaacagccagcggct
gctgctgcaacatacaccaccaccgagacacactatcaagctgcaaaacctgcttatagt
acgaccagtgcctacactggcaccgccagacaggccactaccactggacaggccaaaacg
tatcaagcatctagcacggcttaccagcaatcaaatcctacgcagagcgcgacttactcg
tcgggatacactgctcccgctactcctgccgctgcaccttcaaccgcaacaaataaaacg
gcgagtacaacgtattccggctacgacgcagcgctatatagcgctgcgactatgtatgta
gcccaacagagtgcaaacagcaattcaactaaccagaagactggaggttggcagggctgc
tacggacggaaaggattcggagctggagggggagggatgaagacaatgcggccgaagcag
ccccccaagcctcaacagctacactattgcgatgtctgtaagatcagctgtgccggaccg
caaacgtatcgcgaacacctggaggggcagaagcacaagaagaaggaagcttctttgaag
gtgcctcagcagccaccggcgcgcggggcgggaaatagccttcgttgcgagctctgcgac
gtaacttgcaccgggaacgacgcttacgccgctcatatcagaggcgccaagcatcagaaa
gtagttaaattgcacacgaagctggggaaacccattccgagcgcagatcccaccgttttg
aacccgaaacccgcggcagccgcgaaggctgcagctacgaagaagccaacggtgacggca
acgcctaaaattaacttcgtcgcctccggaaacttgggcacggtaaatcagaaccagtcg
gttgaggttaagcaggaggaaccggccgcggaggagaccgtggaagaggctacggtcgac
gagaaggatatccaaccggttggccaggagtacatcgaggagaacaagtccgaggatggg
aagatcatcagtttcaactgcaagctgtgcgagtgccgcttcaacgaccccaacgccaaa
gacatgcacatgaagggtcgtcgtcacagattcgcctacaagaagaaggtcaaccccgat
ttggtggtcgatatgaagcctagtctgaagcagcgcaagatgctagaggagaagctccgt
aggcaacagatgcgcgatgagtacctacgtcgacgagaggagatcaatcagctgggacct
ataggacccatgctggacgaggagatgttgtactgggaggagaggcgccggtacgaggag
gagtgcgagtactacgagtggttccggcggtacggacgcggtccgggagcgccgccgatt
ccacgaccattcgcgggaccaccgccgatgatgatgtacgcgggtcctcagcggcgaccc
gactcatcggacgacaagcacgtactggcacatcacacgactatttatcccaaggagcaa
gagctgctggccgttcagaaaatagtttctcataccgagaaagcgttgaaattcgtgtcg
gacgctctggccgaagcaagtaagaagaatactcccgtgaatgctaatgccaccgcagca
gcgccggcagcagctggcgcggcacaggcgaatgcggacacgctgaagaaggaagagccc
gacaaaaagaaggcagctacgccacagaaggaggacggcagcgacggaaatctcttctcg
tttcagaaggaaaaggaggattccagaatactccgtggcgtcatgcgtgtcgggaacttg
gctaagggactcttactgtctggcgataatcatgtttgccttgttgttttatgcgctgaa
aaaccgacaagaacgttgctcaataaagtcgctgagattctaccgggtgaattgaaaaat
gttgcacctgaggaaacgtacaacgttggaaagcatccagaatccgcggctctaacggtg
tcgggtggtacggtgaccgtcagcgtaactctcaccagtccattgatgcgtgaaacgccc
aagtctaccgcagcagcagataatgctggacagcagcagcaggaagctgctcaactgcaa
acaacgcccgcggcccccaccgtgacgaaaccagatccaccagatgtacttcccaaggct
aagtgtttggaggctttagctgcactcaggcatgccaagtggtttcaggctagagctact
tccctgcagagctgcgttatggttatccgtataatgcgcgacctttgcaatcgtgtgcca
acgtggggtccgctgaatccttgggcattggaattgctgactgaaaaagtgatcagtacc
gcgggtgctccacttagtcccggtgaagctttgaggagactcttggagtgcgtagctgga
ggtatattgcttccaggcagtccaggactgtccgacccatgcgagaaggagccggttgat
gcaataggaaacatgacatcccagcagagggaagacatcactgcgtccgcgcagcacgcg
ctgcgactggtggcgttccgccagatccacaaagtcctcggcatggagcaactgccgccg
cccaaattcaagggccgatacgcgaggaaacgaagacgcgacaacagcaacggggagggc
acggacagcgaggcctcgaagaaggacaagaaagcggaggagatcaaaatggagacagac
tcaaaatag
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